source.jalview.org Git - jalview.git/commit - utils/jalopy/docs/dedication.html

git://source.jalview.org / jalview.git / commit

author	jprocter <jprocter@compbio.dundee.ac.uk>
	Tue, 27 Sep 2011 08:15:20 +0000 (09:15 +0100)
committer	jprocter <jprocter@compbio.dundee.ac.uk>
	Tue, 27 Sep 2011 08:15:20 +0000 (09:15 +0100)
commit	a45774ee31d9f35d4eff46d54d7deab719afb092
tree	b08301999779d917f9f54e2de33ddc6f83064af9	tree \| snapshot
parent	57e8f9094e056f2f91c4c7168f5bf7385db0776d	commit \| diff

apply version 2.7 copyright

756 files changed:

RELEASE		diff \| blob \| history
THIRDPARTYLIBS		diff \| blob \| history
build.xml		diff \| blob \| history
doc/AddingGroovySupport.html		diff \| blob \| history
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doc/developing.html		diff \| blob \| history
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doc/newdmobj.html		diff \| blob \| history
examples/javascript/deployJava.js		diff \| blob \| history
examples/javascript/jalview.js		diff \| blob \| history
help/helpTOC.xml		diff \| blob \| history
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help/html/calculations/recoverInputdata.html		diff \| blob \| history
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help/html/menus/alignmentMenu.html		diff \| blob \| history
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help/html/misc/aaproperties.html		diff \| blob \| history
help/html/misc/aminoAcids.html		diff \| blob \| history
help/html/misc/geneticCode.html		diff \| blob \| history
help/html/privacy.html		diff \| blob \| history
help/html/releases.html		diff \| blob \| history
help/html/vamsas/index.html		diff \| blob \| history
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help/html/webServices/webServicesPrefs.html		diff \| blob \| history
help/html/whatsNew.html		diff \| blob \| history
jalview-jalopy.xml		diff \| blob \| history
nbbuild.xml		diff \| blob \| history
nbproject/genfiles.properties		diff \| blob \| history
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resources/embl_mapping.xml		diff \| blob \| history
resources/uniprot_mapping.xml		diff \| blob \| history
schemas/JalviewUserColours.xsd		diff \| blob \| history
schemas/JalviewWsParamSet.xsd		diff \| blob \| history
schemas/castor-mapping.xsd		diff \| blob \| history
schemas/jalview.nodesc.properties		diff \| blob \| history
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schemas/jalview.xsd		diff \| blob \| history
schemas/jalviewJvV1.xsd		diff \| blob \| history
schemas/vamsas.xsd		diff \| blob \| history
schemas/vamsasJvV1.xsd		diff \| blob \| history
src/MCview/AppletPDBCanvas.java		diff \| blob \| history
src/MCview/AppletPDBViewer.java		diff \| blob \| history
src/MCview/Atom.java		diff \| blob \| history
src/MCview/Bond.java		diff \| blob \| history
src/MCview/MCMatrix.java		diff \| blob \| history
src/MCview/PDBCanvas.java		diff \| blob \| history
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src/MCview/PDBViewer.java		diff \| blob \| history
src/MCview/PDBfile.java		diff \| blob \| history
src/MCview/Residue.java		diff \| blob \| history
src/MCview/Zsort.java		diff \| blob \| history
src/castor.properties		diff \| blob \| history
src/ext/vamsas/IRegistry.java		diff \| blob \| history
src/ext/vamsas/IRegistryService.java		diff \| blob \| history
src/ext/vamsas/IRegistryServiceLocator.java		diff \| blob \| history
src/ext/vamsas/Jpred.java		diff \| blob \| history
src/ext/vamsas/JpredService.java		diff \| blob \| history
src/ext/vamsas/JpredServiceLocator.java		diff \| blob \| history
src/ext/vamsas/JpredSoapBindingStub.java		diff \| blob \| history
src/ext/vamsas/MuscleWS.java		diff \| blob \| history
src/ext/vamsas/MuscleWSService.java		diff \| blob \| history
src/ext/vamsas/MuscleWSServiceLocator.java		diff \| blob \| history
src/ext/vamsas/MuscleWSSoapBindingStub.java		diff \| blob \| history
src/ext/vamsas/RegistryServiceSoapBindingStub.java		diff \| blob \| history
src/ext/vamsas/SeqSearchI.java		diff \| blob \| history
src/ext/vamsas/SeqSearchServiceLocator.java		diff \| blob \| history
src/ext/vamsas/SeqSearchServiceService.java		diff \| blob \| history
src/ext/vamsas/SeqSearchServiceSoapBindingStub.java		diff \| blob \| history
src/ext/vamsas/ServiceHandle.java		diff \| blob \| history
src/ext/vamsas/ServiceHandles.java		diff \| blob \| history
src/jalview/analysis/AAFrequency.java		diff \| blob \| history
src/jalview/analysis/AlignSeq.java		diff \| blob \| history
src/jalview/analysis/AlignmentSorter.java		diff \| blob \| history
src/jalview/analysis/Conservation.java		diff \| blob \| history
src/jalview/analysis/CrossRef.java		diff \| blob \| history
src/jalview/analysis/Dna.java		diff \| blob \| history
src/jalview/analysis/Finder.java		diff \| blob \| history
src/jalview/analysis/Grouping.java		diff \| blob \| history
src/jalview/analysis/NJTree.java		diff \| blob \| history
src/jalview/analysis/PCA.java		diff \| blob \| history
src/jalview/analysis/ParseProperties.java		diff \| blob \| history
src/jalview/analysis/SeqsetUtils.java		diff \| blob \| history
src/jalview/analysis/SequenceIdMatcher.java		diff \| blob \| history
src/jalview/api/AlignmentViewPanel.java		diff \| blob \| history
src/jalview/api/FeatureRenderer.java		diff \| blob \| history
src/jalview/api/SequenceRenderer.java		diff \| blob \| history
src/jalview/api/SequenceStructureBinding.java		diff \| blob \| history
src/jalview/api/StructureSelectionManagerProvider.java		diff \| blob \| history
src/jalview/appletgui/APopupMenu.java		diff \| blob \| history
src/jalview/appletgui/AlignFrame.java		diff \| blob \| history
src/jalview/appletgui/AlignViewport.java		diff \| blob \| history
src/jalview/appletgui/AlignmentPanel.java		diff \| blob \| history
src/jalview/appletgui/AnnotationColourChooser.java		diff \| blob \| history
src/jalview/appletgui/AnnotationLabels.java		diff \| blob \| history
src/jalview/appletgui/AnnotationPanel.java		diff \| blob \| history
src/jalview/appletgui/AppletJmol.java		diff \| blob \| history
src/jalview/appletgui/AppletJmolBinding.java		diff \| blob \| history
src/jalview/appletgui/CutAndPasteTransfer.java		diff \| blob \| history
src/jalview/appletgui/EditNameDialog.java		diff \| blob \| history
src/jalview/appletgui/EmbmenuFrame.java		diff \| blob \| history
src/jalview/appletgui/ExtJmol.java		diff \| blob \| history
src/jalview/appletgui/FeatureColourChooser.java		diff \| blob \| history
src/jalview/appletgui/FeatureRenderer.java		diff \| blob \| history
src/jalview/appletgui/FeatureSettings.java		diff \| blob \| history
src/jalview/appletgui/Finder.java		diff \| blob \| history
src/jalview/appletgui/FontChooser.java		diff \| blob \| history
src/jalview/appletgui/IdCanvas.java		diff \| blob \| history
src/jalview/appletgui/IdPanel.java		diff \| blob \| history
src/jalview/appletgui/IdwidthAdjuster.java		diff \| blob \| history
src/jalview/appletgui/JVDialog.java		diff \| blob \| history
src/jalview/appletgui/OverviewPanel.java		diff \| blob \| history
src/jalview/appletgui/PCAPanel.java		diff \| blob \| history
src/jalview/appletgui/PaintRefresher.java		diff \| blob \| history
src/jalview/appletgui/PairwiseAlignPanel.java		diff \| blob \| history
src/jalview/appletgui/RedundancyPanel.java		diff \| blob \| history
src/jalview/appletgui/RotatableCanvas.java		diff \| blob \| history
src/jalview/appletgui/ScalePanel.java		diff \| blob \| history
src/jalview/appletgui/SeqCanvas.java		diff \| blob \| history
src/jalview/appletgui/SeqPanel.java		diff \| blob \| history
src/jalview/appletgui/SequenceRenderer.java		diff \| blob \| history
src/jalview/appletgui/SliderPanel.java		diff \| blob \| history
src/jalview/appletgui/Tooltip.java		diff \| blob \| history
src/jalview/appletgui/TreeCanvas.java		diff \| blob \| history
src/jalview/appletgui/TreePanel.java		diff \| blob \| history
src/jalview/appletgui/UserDefinedColours.java		diff \| blob \| history
src/jalview/bin/Cache.java		diff \| blob \| history
src/jalview/bin/Jalview.java		diff \| blob \| history
src/jalview/bin/JalviewLite.java		diff \| blob \| history
src/jalview/bin/JalviewLiteURLRetrieve.java		diff \| blob \| history
src/jalview/binding/Alignment.java		diff \| blob \| history
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src/jalview/commands/ChangeCaseCommand.java		diff \| blob \| history
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src/jalview/commands/RemoveGapColCommand.java		diff \| blob \| history
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src/jalview/commands/SlideSequencesCommand.java		diff \| blob \| history
src/jalview/commands/TrimRegionCommand.java		diff \| blob \| history
src/jalview/datamodel/AlignedCodonFrame.java		diff \| blob \| history
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src/jalview/datamodel/AlignmentAnnotation.java		diff \| blob \| history
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src/jalview/datamodel/AlignmentView.java		diff \| blob \| history
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src/jalview/datamodel/BinaryNode.java		diff \| blob \| history
src/jalview/datamodel/BinarySequence.java		diff \| blob \| history
src/jalview/datamodel/CigarArray.java		diff \| blob \| history
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src/jalview/ext/jmol/JalviewJmolBinding.java		diff \| blob \| history
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src/jalview/gui/AnnotationColourChooser.java		diff \| blob \| history
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src/jalview/gui/AnnotationLabels.java		diff \| blob \| history
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src/jalview/gui/AppJmol.java		diff \| blob \| history
src/jalview/gui/AppJmolBinding.java		diff \| blob \| history
src/jalview/gui/AssociatePdbFileWithSeq.java		diff \| blob \| history
src/jalview/gui/BlogReader.java		diff \| blob \| history
src/jalview/gui/ConservationThread.java		diff \| blob \| history
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src/jalview/gui/CutAndPasteTransfer.java		diff \| blob \| history
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src/jalview/gui/PromptUserConfig.java		diff \| blob \| history
src/jalview/gui/RedundancyPanel.java		diff \| blob \| history
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src/jalview/gui/SequenceFetcher.java		diff \| blob \| history
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src/jalview/gui/SliderPanel.java		diff \| blob \| history
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src/jalview/gui/TextColourChooser.java		diff \| blob \| history
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src/jalview/gui/UserDefinedColours.java		diff \| blob \| history
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src/jalview/gui/VamsasApplication.java		diff \| blob \| history
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src/jalview/io/AMSAFile.java		diff \| blob \| history
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