removed all dasobert code and begun to replace with Jdas calls.
authorjprocter <jprocter@compbio.dundee.ac.uk>
Sun, 4 Dec 2011 18:56:26 +0000 (18:56 +0000)
committerjprocter <jprocter@compbio.dundee.ac.uk>
Mon, 13 Feb 2012 08:42:43 +0000 (08:42 +0000)
commitc1aff0bc80c5a64ec93acd8b6c5844da2d6da509
tree76c9d880a3523fd7fd1c4ac4992bf837531b72c4
parentec4ef38882bce0469ce7c65cd70ceb85421cfbd2
removed all dasobert code and begun to replace with Jdas calls.
41 files changed:
.classpath
lib/jdas-1.0.3.jar [new file with mode: 0644]
src/jalview/bin/Cache.java
src/jalview/gui/DasSourceBrowser.java
src/org/biojava/dasobert/das/DAS_FeatureRetrieve.java [deleted file]
src/org/biojava/dasobert/das/DAS_Feature_Handler.java [deleted file]
src/org/biojava/dasobert/das/DAS_Sequence_Handler.java [deleted file]
src/org/biojava/dasobert/das/FeatureThread.java [deleted file]
src/org/biojava/dasobert/das/SequenceThread.java [deleted file]
src/org/biojava/dasobert/das2/Das2Capability.java [deleted file]
src/org/biojava/dasobert/das2/Das2CapabilityImpl.java [deleted file]
src/org/biojava/dasobert/das2/Das2Source.java [deleted file]
src/org/biojava/dasobert/das2/Das2SourceImpl.java [deleted file]
src/org/biojava/dasobert/das2/DasSourceConverter.java [deleted file]
src/org/biojava/dasobert/das2/io/DAS2SourceHandler.java [deleted file]
src/org/biojava/dasobert/das2/io/DasSourceReader.java [deleted file]
src/org/biojava/dasobert/das2/io/DasSourceReaderImpl.java [deleted file]
src/org/biojava/dasobert/dasregistry/Das1Source.java [deleted file]
src/org/biojava/dasobert/dasregistry/Das2Validator.java [deleted file]
src/org/biojava/dasobert/dasregistry/DasCoordSysComparator.java [deleted file]
src/org/biojava/dasobert/dasregistry/DasCoordinateSystem.java [deleted file]
src/org/biojava/dasobert/dasregistry/DasSource.java [deleted file]
src/org/biojava/dasobert/dasregistry/DasSourceComparator.java [deleted file]
src/org/biojava/dasobert/eventmodel/AbstractDasEvent.java [deleted file]
src/org/biojava/dasobert/eventmodel/FeatureEvent.java [deleted file]
src/org/biojava/dasobert/eventmodel/FeatureListener.java [deleted file]
src/org/biojava/dasobert/eventmodel/ObjectListener.java [deleted file]
src/org/biojava/dasobert/eventmodel/SequenceEvent.java [deleted file]
src/org/biojava/dasobert/eventmodel/SequenceListener.java [deleted file]
src/org/biojava/dasobert/feature/AbstractFeatureTrack.java [deleted file]
src/org/biojava/dasobert/feature/AbstractSegment.java [deleted file]
src/org/biojava/dasobert/feature/FeatureComparator.java [deleted file]
src/org/biojava/dasobert/feature/FeatureMapComparator.java [deleted file]
src/org/biojava/dasobert/feature/FeatureTrack.java [deleted file]
src/org/biojava/dasobert/feature/FeatureTrackConverter.java [deleted file]
src/org/biojava/dasobert/feature/FeatureTrackImpl.java [deleted file]
src/org/biojava/dasobert/feature/HistogramFeature.java [deleted file]
src/org/biojava/dasobert/feature/HistogramSegment.java [deleted file]
src/org/biojava/dasobert/feature/Segment.java [deleted file]
src/org/biojava/dasobert/feature/SegmentComparator.java [deleted file]
src/org/biojava/dasobert/feature/SegmentImpl.java [deleted file]