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JAL-3187 return a colour for linked features with transparency
[jalview.git] / .classpath
2018-09-11 Jim ProcterJAL-3112 Use classgraph to reconstruct the classpath... blob | commitdiff
2018-09-11 Jim ProcterJAL-3111 drop hts-1.33 as a dependency (in favour of... blob | commitdiff | diff to current
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch blob | commitdiff | diff to current
2018-09-07 Jim ProcterJAL-2988 JAL-2968 renamed patched VAqua5 to VAqua5... blob | commitdiff | diff to current
2018-08-22 Jim ProcterJAL-2988 JAL-2976 update to latest VAqua release: VAqua5 blob | commitdiff | diff to current
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more ! blob | commitdiff | diff to current
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... blob | commitdiff | diff to current
2018-05-02 Jim ProcterJAL-2976 Vaqua(4) as a dependency blob | commitdiff | diff to current
2018-03-21 Jim ProcterJAL-2754 remove duplicate classpath entry again blob | commitdiff | diff to current
2018-03-21 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... blob | commitdiff | diff to current
2018-03-21 gmungocJAL-2754 update to Java 1.8 blob | commitdiff | diff to current
2017-11-15 gmungocJAL-2835 spike updated with latest blob | commitdiff | diff to current
2017-11-13 gmungocMerge branch 'develop' into features/JAL-1793VCF blob | commitdiff | diff to current
2017-11-13 Jim ProcterJAL-2702 update to groovy 2.4.12 blob | commitdiff | diff to current
2017-10-20 gmungocPush 1793 latest to spike branch blob | commitdiff | diff to current
2017-10-06 gmungocJAL-2753 update to htsjdk 2.12.0 (requires Java 8) blob | commitdiff | diff to current
2017-10-06 gmungocJAL-2754 update to Java 1.8 blob | commitdiff | diff to current
2017-06-09 gmungocJAL-2446 merged to spike branch blob | commitdiff | diff to current
2017-05-23 Jim ProcterJAL-2549 replace JABAWS 2.1 with 2.2 client and remove... blob | commitdiff | diff to current
2016-10-27 tcofoegbuJAL-2177 Jmol update from: Jmol-14.2.14_2015.06.11... blob | commitdiff | diff to current
2016-05-04 gmungocJAL-2074 reinstated xerces-impl.jar blob | commitdiff | diff to current
2016-05-04 Jim ProcterRevert "JAL-2074 removed xerces to explore wierdness" blob | commitdiff | diff to current
2016-05-04 gmungocJAL-2074 corrected classpathentry for Groovy 2.4.6 blob | commitdiff | diff to current
2016-04-26 tcofoegbuJAL-2071 House keeping blob | commitdiff | diff to current
2016-04-26 tcofoegbuJAL-2074 removed hard-coded groovy lib path in classpath blob | commitdiff | diff to current
2016-04-25 Jim ProcterJAL-2074 removed xerces to explore wierdness blob | commitdiff | diff to current
2016-04-25 Jim ProcterJAL-2074 reinstate upgrade to groovy 2.8.4-indy blob | commitdiff | diff to current
2016-04-25 Jim ProcterJAL-2074 switch to non-indy groovy to see if class... blob | commitdiff | diff to current
2016-04-20 Jim ProcterJAL-2074 updated groovy-all to 2.4.6-indy blob | commitdiff | diff to current
2015-12-22 gmungocJAL-1191 SequenceOntology wrapping/caching SO.OBO via... blob | commitdiff | diff to current
2015-10-15 Jim ProcterMerge branch 'develop' into features/JAL-653_JAL-1766_h... blob | commitdiff | diff to current
2015-06-26 gmungocMerge branch 'develop' into features/JAL-892varnaToProject blob | commitdiff | diff to current
2015-06-26 gmungocMerge branch 'develop' into features/JAL-1759jmolUpdate blob | commitdiff | diff to current
2015-06-26 gmungocJAL-1759 updates for Jmol 14.2.14_25.06.11 blob | commitdiff | diff to current
2015-06-23 Jim ProcterMerge branch 'merge/develop_JAL-1780_JAL-653_JAL-1892... blob | commitdiff | diff to current
2015-06-22 gmungocJAL-893 upgrade to VARNAv3-93.jar blob | commitdiff | diff to current
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring blob | commitdiff | diff to current
2015-06-12 Jim ProcterJAL-1766 update HTSJDK to Version 1.133 blob | commitdiff | diff to current
2015-06-08 Jim ProcterJAL-1766 added a snapshot build of the htsjdk blob | commitdiff | diff to current
2015-06-02 tcofoegbuJAL-1641 applet build fix blob | commitdiff | diff to current
2015-05-27 tcofoegbuRemoved redundant classes and dependencies pulled in... blob | commitdiff | diff to current
2015-05-21 tcofoegbuJAL-1740 implemented auto-update of BioJsMSA, introduce... features/JAL-1740_BioJsAutoUpdater blob | commitdiff | diff to current
2015-05-05 gmungocJAL-1725 jetty libraries added to classpath blob | commitdiff | diff to current
2015-03-27 tcofoegbumerge commit blob | commitdiff | diff to current
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch blob | commitdiff | diff to current
2015-02-26 Charles OfoegbuJAL-1667 PDBe Search Interface implementation blob | commitdiff | diff to current
2015-02-06 Jim ProcterMerge branch 'bug/JAL-1643_File-chooser-improvement... blob | commitdiff | diff to current
2015-02-05 Charles Ofoegbumerge commit blob | commitdiff | diff to current
2015-02-05 Jim ProcterJAL-1643 correct version of quaqua (8) plus THIRDPARTYL... blob | commitdiff | diff to current
2015-02-05 Jim ProcterJAL-1643 renamed quaqua library to add version number blob | commitdiff | diff to current
2015-02-04 Charles OfoegbuJAL-1643 Modified JalviewFileChooser to have a more... blob | commitdiff | diff to current
2015-01-07 Jim ProcterMerge branch 'develop' into JAL-1483_29dev blob | commitdiff | diff to current
2014-12-28 gmungocMerge branch 'features/JAL-1596ChimeraREST' into develop blob | commitdiff | diff to current
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 blob | commitdiff | diff to current
2014-12-08 Charles OfoegbuAdded annotation export configuration for Html export... blob | commitdiff | diff to current
2014-11-26 Charles Ofoegbuadded jfreesvg.jar to classpath blob | commitdiff | diff to current
2014-11-26 Charles OfoegbuMerge branch 'develop' of https://source.jalview.org... blob | commitdiff | diff to current
2014-11-25 Jim ProcterMerge branch 'bug/JAL-689' into develop blob | commitdiff | diff to current
2014-11-25 Jim Procterback out duplicate jfree classpath entry blob | commitdiff | diff to current
2014-11-25 Charles Ofoegbuclasspath conflict resolution blob | commitdiff | diff to current
2014-11-25 Charles Ofoegbumerge commit blob | commitdiff | diff to current
2014-11-25 Charles Ofoegbumerge commit features/JAL-1469_svg-output-for-figure-export blob | commitdiff | diff to current
2014-11-18 Charles Ofoegbuupdated classpath blob | commitdiff | diff to current
2014-11-18 Charles Ofoegbumodified classpath blob | commitdiff | diff to current
2014-11-17 Charles Ofoegbucomand line support for svg generation blob | commitdiff | diff to current
2014-11-13 Jim ProcterMerge branch 'features/JAL-1469_svg-output-for-figure... blob | commitdiff | diff to current
2014-11-13 Jim ProcterJAL-1469 added jfreesvg to desktop dependencies blob | commitdiff | diff to current
2014-11-13 Charles Ofoegbuadded jfreesvg dependency to class path blob | commitdiff | diff to current
2014-10-31 Charles Ofoegbuadded jsoup lib to class path blob | commitdiff | diff to current
2014-10-23 Jim ProcterMerge branch 'hotfix/JAL-1521' into Release_2_8_2_Branch blob | commitdiff | diff to current
2014-10-23 Jim ProcterMerge branch 'hotfix/JAL-1521' into develop blob | commitdiff | diff to current
2014-10-23 unknownJAL-1521 updated xerces to 2.11 along with xml-apis blob | commitdiff | diff to current
2014-10-23 Jim ProcterJAL-1521 patch is to remove xerces from classpath.... blob | commitdiff | diff to current
2014-10-21 Jim ProcterJAL-1216 update to VARNA 3.91 blob | commitdiff | diff to current
2014-07-22 j.procter@dundee... JAL-1333 finessing log4j and slf dependencies for struc... blob | commitdiff | diff to current
2014-07-04 j.procter@dundee... JAL-1333 more abstraction and refactoring and working... blob | commitdiff | diff to current
2014-07-01 Jim ProcterMerge branch 'feature/JAL-1333' into features/JAL-1333 blob | commitdiff | diff to current
2013-10-15 Jim ProcterJAL-1159 Merging 2.8.1 patches and Anne Menards work... blob | commitdiff | diff to current
2013-10-14 Jim ProcterMerge branch 'develop' into dev_from_2_8_1 blob | commitdiff | diff to current
2013-10-04 Jim ProcterJAL-1378 JWS-71 update to from-source build of JABA... blob | commitdiff | diff to current
2013-08-28 Daniel BartonRNAalifoldClient updated to be more like AAConClient... blob | commitdiff | diff to current
2013-08-27 Daniel BartonJAL-1358 Just the eclipse project/classpath files so... blob | commitdiff | diff to current
2013-08-22 Daniel BartonJalview builds sucessfully and runs from eclipse blob | commitdiff | diff to current
2013-07-03 Jim Procterlooking through existing chimera/cytoscape hooks to... blob | commitdiff | diff to current
2013-02-13 Jim ProcterMerge branch 'jims_annotate3d_update' into menard_final... blob | commitdiff | diff to current
2013-02-13 jprocterJAL-1216 switch to official release of VARNA 3.9 blob | commitdiff | diff to current
2013-02-11 jprocterupgrade to latest paradise services model using JSon... blob | commitdiff | diff to current
2012-12-04 jprocterbogus source dir for jmol (only for jim - fix for yours... blob | commitdiff | diff to current
2012-12-04 jprocterJAL-1216 switch to official release of VARNA 3.9 blob | commitdiff | diff to current
2012-11-15 jprocterremove java7 plugin dependency blob | commitdiff | diff to current
2012-07-10 Anne Menardv2 blob | commitdiff | diff to current
2012-07-05 Anne MenardAdd support RNAML format blob | commitdiff | diff to current
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065... blob | commitdiff | diff to current
2012-03-30 jprocterMerge branch 'JAL-972-dasobert-to-jdas' into JAL-972... blob | commitdiff | diff to current
2012-03-01 jprocter(JAL-893) update to VARNAv3.9-dev version blob | commitdiff | diff to current
2012-02-29 jprocterjdas runtime dependencies blob | commitdiff | diff to current
2012-02-13 jprocter(JAL-972) relative refs for libraries and some addition... blob | commitdiff | diff to current
2012-02-13 jprocter(JAL-972) updated jdas to latest version includign... blob | commitdiff | diff to current
2012-02-13 jprocterremoved all dasobert code and begun to replace with... blob | commitdiff | diff to current
2011-11-09 jprocterMerge branch 'JAL-986_idwidthprefs' into develop blob | commitdiff | diff to current
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