JAL-1958 use the annotation score for the sequence being coloured !
[jalview.git] / build.xml
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-11-19 Charles OfoegbuJAL-1522 included installation details in log output
2014-11-12 Jim ProcterJAL-1541 exclude all unnecessary jalview.io classes...
2014-10-21 Jim ProcterJAL-1216 update varna dependency string in jalviewLite...
2014-06-06 Jim ProcterJAL-1517 copyright and formatting
2014-06-06 Jim ProcterJAL-1518 drop Jalopy from utils directory
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-06-05 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch
2014-06-04 Jim ProcterJAL-690 JAL-1503 make file associations optional for...
2014-06-04 Jim ProcterJAL-1514 - add jalview.org and dundee to explore if...
2014-06-03 Jim Procterregress fix on JAL-690 - insert association elements...
2014-06-03 Jim ProcterJAL-1503 formatting
2014-06-03 Jim ProcterJAL-1503 formatting build file
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-02-18 Jim ProcterMerge branch 'JAL-1445' into develop
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-02-03 Jim ProcterMerge branch 'JAL-957_jbake' into r281_JAL-957
2014-01-31 Jalview build ManagerJAL-1432 ensure unsigned jmol jar is actually written Release_2_8_0b1_Branch
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2014-01-28 Jim ProcterMerge branch 'JAL-957_jbake' into Release_2_8_Branch
2014-01-28 Jim ProcterJAL-1400 sign the jnlp for arbitrary memory
2014-01-28 Jim ProcterMerge branch 'JAL-957_jbake' into Release_2_8_Branch
2014-01-28 Jim ProcterJAL-957 JAL-1400 only sign specific jar artefacts for...
2014-01-28 Jim ProcterMerge branch 'JAL-957_jbake' into Release_2_8_Branch
2014-01-28 Jim ProcterJAL-957 make a copy of the applet/Jmol applet jars...
2014-01-27 Jim ProcterJAL-1430 mfa added as a known extension for FASTA files
2014-01-17 jprocterJAL-1400 still fixing JmolApplet manifest issue
2014-01-17 jprocterJAL-1400 tweaking to ensure JmolApplet build correctly
2014-01-17 jprocterformatting
2014-01-17 jprocterJAL-1400 default JalviewLite build is signed applet...
2014-01-13 Jalview build ManagerJAL-1400 sign the applet with manifest attributes for...
2013-11-26 Jim ProcterMerge branch 'testMerge' into trialMergeDev
2013-11-26 Jim ProcterMerge branch 'JAL-1400_signapplet' into testMerge
2013-11-26 Jim ProcterJAL-1400 update manifest in the JmolApplet jar
2013-11-26 Jim ProcterJAL-1400 disable 'Permissions' in manifest to see if...
2013-11-26 Jim ProcterJAL-1400 add codebase and caller allowable codebase
2013-11-25 Jim ProcterJAL-1139 add SHA1WithRSA for applet signjar
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into develop
2013-11-25 Jim ProcterJAL-1139 add SHA1WithRSA for applet signjar
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into Release_2_8_1_Branch
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into Release_2_8_Branch
2013-11-25 Jim ProcterJAL-1139 specified SHA1WithRSA for sig algorithm and...
2013-11-25 Jim Procteradivce from ant.apache.org/manual/Tasks/signjar.html re
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into Release_2_8_Branch
2013-11-25 Jim ProcterJAL-1139 need to explicitly specify SHA1 for java 6...
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into develop
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into Release_2_8_1_Branch
2013-11-25 Jim ProcterMerge branch 'JAL-1139_proguard' into Release_2_8_Branch
2013-11-25 Jim ProcterJAL-1139 supress dependency warnings from proguard
2013-11-07 Jim ProcterMerge branch 'JAL-1286' into develop
2013-11-07 Jim ProcterMerge branch 'JAL-1286' into Release_2_8_1_Branch
2013-11-05 Jim Procterexperiment with reinstating the sandbox permissions
2013-11-05 Jim ProcterJAL-1400 try putting explicit domain for jalviewLite...
2013-11-05 Jim ProcterJAL-1400 Always create indices for jar before signing
2013-11-05 Jim ProcterJAL-1400 sign everything !
2013-11-05 Jim ProcterJAL-1400 explicit security settings for applet
2013-11-05 Jim ProcterJAL-1400 explicit security permissions for Desktop
2013-10-14 Jim ProcterMerge branch 'develop' into dev_from_2_8_1
2013-10-11 Jim ProcterJAL-1354 ensure resource bundles are copied into Jalvie...
2013-06-09 Jim ProcterJAL-674 - update applet build dependency on VARNA
2012-11-15 jprocterMerge branch 'develop' into menard
2012-11-09 jprocterproperty to configure webstart image
2012-11-09 jproctertweak file association comment and make sure webstart...
2012-09-19 jprocterJAL-1130 new logo in help, splash screen and web servic...
2012-08-31 jprocterJAL-1159 patch for building menard branch on cruisecontrol
2011-11-04 jprocterMerge branch 'JAL-980_jmol_patch' into develop
2011-11-04 jprocter(JAL-980) use proper release number for Jmol libs ...
2011-11-04 jprocter(JAL-980) update Jmol library to 12.2.16452 (built...
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-10-03 jprocterredact previous commit - fileassociation tag not allowe...
2011-09-28 jprocterjnlps with and without file associations for default...
2011-09-27 jprocterapply version 2.7 copyright
2011-07-05 jprocterensure javascript and jmol example directories are...
2011-07-03 jprocterjavadoc built under dist directory for all Jalview...
2011-06-29 jprocterdocumentation and targets for building a working applet...
2011-02-04 jprocterjava 1.4.2 applet build
2011-01-12 jprocterapplication compilation time dependency plugin.jar...
2011-01-12 jprocterjalviewLite now needs plugin.jar from jre so it can...
2010-09-23 jprocterJalview 2.6 source licence
2010-09-22 jprocterjmol update
2010-09-15 jprocterclean the dist directory before copying Jars
2010-09-14 jprocterfix the javac issue for JmolApplet references in applic...
2010-09-14 jprocterappletgui should ve excluded from normal application...
2010-09-14 jprocterstreamlined app and applet jmol console + event handlin...
2010-09-13 jprocterpatched Jmol and code for embedding JmolAppConsole...
2010-09-06 jprocternew XML representation for web services parameters
2010-08-25 jprocterapplet now requires java 1.5 minimum (jmol 12.1.xx...
2010-08-20 jprocterrollback to 1.58 - since excludes are unnecessary
2010-08-20 jprocterbroken xml ? (could be old ant issue)
2010-08-20 jprocter(probably unnecessary) explicit inclusion of jalview...
2010-08-18 jprocternew appletlib path for jars specific to the applet
2010-08-18 jprocternew appletlib path for jars specific to the applet
2010-08-18 jproctersource level now 1.5
2010-08-18 jproctersource level now 1.5
2010-08-18 jproctersource level now 1.5
2010-08-18 jprocternew appletlib path for jars specific to the applet
2010-08-06 jprocterrender jnlp artefacts for 1G and 2G machines (jalview_1...
2010-06-17 jprocterupdate jmol jar version for applet
2010-04-30 jprocterjalview 2.5 release banner
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