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JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog
[jalview.git]
/
src
/
jalview
/
appletgui
/
AlignmentPanel.java
2020-05-18
Jim Procter
Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
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commitdiff
2019-06-04
Jim Procter
Merge branch 'develop' into developtomchmmer
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diff to current
2019-04-18
hansonr
removes unnecessary clearFastPaint
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diff to current
2019-04-18
hansonr
hack for fastpaint Java bug upshifting one line after...
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diff to current
2019-04-18
hansonr
reverting seqPanel.seqCanvas.clearFastPaint();
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diff to current
2019-04-18
hansonr
adds an explicit clearing of the SeqCanvas fastPaint...
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diff to current
2018-09-10
gmungoc
JAL-3099 use Alignment.getVisibleWidth() where wanted
bug/JAL-3099alignmentVisibleWidth
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commitdiff
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diff to current
2018-03-21
gmungoc
JAL-2629 tweaks to Information annotation updating
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commitdiff
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diff to current
2018-01-15
kiramt
JAL-2759 Rename findColumnPosition and adjustForHiddenC...
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commitdiff
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diff to current
2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
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diff to current
2017-10-26
Jim Procter
Merge branch 'feature/JAL-2488finalize' into develop
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diff to current
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
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commitdiff
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diff to current
2017-10-12
Jim Procter
JAL-2773 add new flag to paintAlignment(updateOverview...
features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
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diff to current
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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diff to current
2017-09-01
gmungoc
JAL-2488 remove finalize methods
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commitdiff
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diff to current
2017-08-16
Jim Procter
JAL-2418 source formatting
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commitdiff
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diff to current
2017-07-31
kiramt
JAL-2634 Make overview box full height when alignment...
bug/JAL-2634
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diff to current
2017-07-24
gmungoc
spike branch updated from latest features/JAL-2446
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diff to current
2017-07-18
gmungoc
JAL-147 don't scroll up beyond startRes = 0
bug/JAL-147scrollWrappedView
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diff to current
2017-07-18
gmungoc
JAL-147 corrected calculation of vertical scroll positi...
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diff to current
2017-07-03
gmungoc
JAL-147 ViewportRanges calculate wrapped vertical scrol...
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diff to current
2017-06-29
gmungoc
JAL-147 improved wrapped scrolling (including Overview...
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diff to current
2017-06-09
gmungoc
JAL-2446 merged to spike branch
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commitdiff
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diff to current
2017-05-26
kiramt
JAL-2491 Missed port to applet from JAL-1691
bug/JAL-2491
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diff to current
2017-05-15
kiramt
Merge remote-tracking branch 'origin/develop' into...
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diff to current
2017-05-15
kiramt
JAL-2491 Tidies
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diff to current
2017-05-12
kiramt
JAL-2491 Tidies to Overview panel calls in light of...
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diff to current
2017-05-12
Jim Procter
Merge branch 'features/JAL-2435splitScreenFont' into...
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diff to current
2017-05-12
kiramt
JAL-2491 Renamed comp scrolling flag for consistency...
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diff to current
2017-05-12
kiramt
JAL-2491 Added adjustment methods to be called directly
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commitdiff
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diff to current
2017-05-12
kiramt
JAL-2491 Tweaks for applet
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commitdiff
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diff to current
2017-05-11
kiramt
JAL-2491 First port to applet
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commitdiff
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diff to current
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
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commitdiff
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diff to current
2017-04-03
gmungoc
JAL-2435 further adjustments to behaviour in split...
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commitdiff
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diff to current
2017-03-16
kiramt
JAL-2388 Applied ViewportRanges to code
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commitdiff
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diff to current
2017-03-16
kiramt
JAL-2388 Renamed viewport position props to viewport...
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2017-03-14
kiramt
JAL-2439 Fixes to out-by-one sequence indexing in gui...
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2017-02-27
kiramt
JAL-2388 Make startRes,startSeq,endRes,endSeq private...
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2016-11-04
gmungoc
JAL-966 JAL-1854 removed redundant methods / modifiers...
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diff to current
2016-11-02
Jim Procter
JAL-966 JAL-345 JAL-1738 quick rewrite of scrollToPosit...
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2016-10-28
Jim Procter
JAL-966 JAL-1738 JAL-345 interfaces for SearchResults...
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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2016-09-22
gmungoc
JAL-2216 finalize call super.finalize()
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diff to current
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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commitdiff
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diff to current
2015-09-03
Jim Procter
JAL-961 efficiency TODO: decouple overview updates...
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diff to current
2015-07-08
gmungoc
JAL-1759 merge from develop
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commitdiff
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diff to current
2015-07-06
gmungoc
JAL-1799 tweaked calculation for applet, now showing...
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diff to current
2015-07-06
gmungoc
JAL-1799 equivalent logic in applet
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diff to current
2015-05-01
gmungoc
JAL-1690 refining 'copy format from' as applied to...
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diff to current
2015-04-08
gmungoc
JAL-1691 applet SplitFrame scrolling; pull up of 5...
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diff to current
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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commitdiff
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diff to current
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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commitdiff
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diff to current
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
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2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
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diff to current
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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commitdiff
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diff to current
2014-11-27
Jim Procter
organise imports
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commitdiff
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diff to current
2014-11-27
Jim Procter
JAL-966 promote getName to an api method
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commitdiff
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diff to current
2014-11-14
Jim Procter
Merge branch 'develop' into JAL-1483_featureBasedTreeCalc
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diff to current
2014-07-02
Jim Procter
revalidate appears to have gone away ?? (java 1.7 upgra...
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diff to current
2014-06-13
Jim Procter
Merge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
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diff to current
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
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diff to current
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
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diff to current
2014-05-27
Jim Procter
JAL-1402 conditional logic to ensure annotation & label...
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commitdiff
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diff to current
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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commitdiff
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diff to current
2014-04-21
Jim Procter
JAL-967 JAL-1482 new feature renderer api - needs more...
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commitdiff
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diff to current
2014-04-04
Jim Procter
JAL-1211 - set annotation panel height according to...
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commitdiff
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diff to current
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
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diff to current
2012-11-08
jprocter
tidy imports
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commitdiff
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diff to current
2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
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diff to current
2012-10-03
jprocter
formatting
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commitdiff
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diff to current
2012-09-24
jprocter
JAL-958 JAL-966 refactor group/alignment associated...
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commitdiff
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diff to current
2012-08-29
jprocter
JAL-1155 fix panel length calculation for grouped graph...
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commitdiff
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diff to current
2012-05-30
jprocter
JAL-1114 - refactor methods handling Vectors and Hashta...
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commitdiff
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diff to current
2011-10-27
jprocter
(JAL-969) refactored alignmentViewport base class to...
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diff to current
2011-10-21
jprocter
extend alignPanel api with OOMHandler call to raise...
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commitdiff
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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commitdiff
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diff to current
2011-09-27
jprocter
apply version 2.7 copyright
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commitdiff
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diff to current
2011-07-22
jprocter
ensure propagation of colour change on annotation updat...
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commitdiff
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diff to current
2011-07-18
jprocter
fixed mouseover problem - still need to deal with flick...
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commitdiff
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diff to current
2011-06-30
jprocter
set initial annotation panel height appropriately ...
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commitdiff
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diff to current
2011-06-29
jprocter
ensure annotation height adjuster doesn't disappear...
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commitdiff
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diff to current
2011-05-17
jprocter
refactor to allow distinct StructureSelectionManager...
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commitdiff
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diff to current
2011-04-21
jprocter
moved to same place as in jalview.gui
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commitdiff
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diff to current
2011-02-18
jprocter
fix scrolltoposition behaviour and new alignmentPanel api
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commitdiff
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diff to current
2011-02-14
jprocter
JAL-621 (mouseover debugging) and JAL-564 (annotation...
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commitdiff
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diff to current
2011-02-04
jprocter
1.2ish awt methods
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commitdiff
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diff to current
2011-02-04
jprocter
1.2ish awt methods and excluding unused code
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commitdiff
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diff to current
2011-02-04
jprocter
adjustable annotation panel height and vertical scrollb...
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commitdiff
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diff to current
2011-01-21
jprocter
search result highlighting and scrolling and some patch...
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commitdiff
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diff to current
2011-01-18
jprocter
patch for JAL-695 - need to test if this is observed...
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commitdiff
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diff to current
2010-09-23
jprocter
apply jalview code style
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commitdiff
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diff to current
2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
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diff to current
2010-04-30
jprocter
jalview 2.5 release banner
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commitdiff
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diff to current
2009-06-08
jprocter
apply gpl development license
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2008-11-12
jprocter
automatic scrolling option added to view
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