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JAL-4411 store class of provider in PDBEntry
[jalview.git]
/
src
/
jalview
/
controller
/
2022-09-15
Jim Procter
JAL-4062 avc operation and model method for copying...
tree
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commitdiff
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
tree
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commitdiff
2020-10-29
Jim Procter
JAL-3759 exclude hidden columns when processing...
tree
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commitdiff
2020-07-06
gmungoc
JAL-3311 JAL-3141 JAL-3144 tidying obsolete message...
tree
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commitdiff
2020-03-30
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2020-03-20
Jim Procter
JAL-3549 javadoc
tree
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commitdiff
2020-03-09
gmungoc
JAL-3549 JAL-3305 no Sort By Score / Density if no...
tree
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commitdiff
2020-02-20
Jim Procter
JAL-3187 individual feature settings panel has revert...
tree
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commitdiff
2020-02-17
Jim Procter
JAL-3187 better semantics for feature settings closed...
tree
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commitdiff
2020-02-14
Jim Procter
JAL-3187 alternative solution - gather feature settings...
tree
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commitdiff
2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-04-20
gmungoc
JAL-2791 tailored message if find fails on selection...
tree
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commitdiff
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2018-11-19
Jim Procter
JAL-3127 drop redundant hidden representative sequences...
tree
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commitdiff
2018-10-16
Jim Procter
JAL-3127 use AlignViewportI.addGroup to create & propag...
tree
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commitdiff
2018-06-28
hansonr
JAL-3032 DND enabled; additional io changes for File...
tree
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commitdiff
2018-01-10
gmungoc
JAL-1793 update spike branch to latest
tree
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commitdiff
2017-12-08
gmungoc
JAL-2843 read/write feature filters from/to Jalview...
tree
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commitdiff
2017-11-02
gmungoc
JAL-2808 spike updated with latest
tree
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commitdiff
2017-11-02
gmungoc
JAL-2808 refactored getColor() checks feature visibility
tree
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commitdiff
2017-10-31
gmungoc
Merge branch 'bug/JAL-2791selectVisibleFeatures' into
tree
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commitdiff
2017-10-31
gmungoc
JAL-2791 select columns by _visible_ features
tree
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commitdiff
2017-10-30
gmungoc
JAL-2791 check feature visibility when selecting columns
tree
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commitdiff
2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
tree
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commitdiff
2017-10-26
Jim Procter
Merge branch 'feature/JAL-2488finalize' into develop
tree
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commitdiff
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
tree
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commitdiff
2017-10-12
Jim Procter
JAL-2773 add new flag to paintAlignment(updateOverview...
features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-09-01
gmungoc
JAL-2488 remove finalize methods
tree
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-06-01
gmungoc
JAL-2754 Sequence.findFeatures(fromCol, toCol)
features/JAL-2754findFeaturesByColumn
tree
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commitdiff
2017-05-31
gmungoc
JAL-2574 preparation for Sequence.findFeatures(col1...
tree
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commitdiff
2017-05-19
gmungoc
JAL-2490 only count sequences where feature overlap...
tree
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commitdiff
2017-05-15
gmungoc
JAL-2490 use findFeatures() for efficient feature overl...
tree
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commitdiff
2016-11-25
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2016-11-23
Jim Procter
Merge branch 'bug/JAL-2323disulfideOverview' into develop
tree
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commitdiff
2016-11-21
gmungoc
JAL-2333 corrected select columns with 'contact' feature
tree
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commitdiff
2016-10-30
Jim Procter
JAL-1738 JAL-345 new controller method based on mark...
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-08-30
gmungoc
Merge branch 'develop' into features/filetypeEnum
tree
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commitdiff
2016-08-24
gmungoc
JAL-1424 recode calls to MessageManager to allow code...
tree
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commitdiff
2016-08-23
gmungoc
JAL-2174 markColumns() refactored inside ColumnSelection
tree
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commitdiff
2016-08-19
gmungoc
JAL-2174 bug fixes + refactoring to allow + unit tests
tree
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commitdiff
2016-08-18
gmungoc
JAL-1445 status message '...not containing...' for...
tree
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commitdiff
2016-07-12
gmungoc
FileFormat enum wip changes
tree
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commitdiff
2016-05-03
gmungoc
JAL-2050 hide introns also when fetching Ensembl xrefs...
tree
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commitdiff
2016-02-12
gmungoc
JAL-2008 avoid unnecessary repaints; signatures changed...
tree
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commitdiff
2016-02-04
gmungoc
Merge branch 'develop' into features/JAL-653_JAL-1766_h...
tree
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commitdiff
2016-02-04
gmungoc
JAL-599 bug fixed so array of visible types is populated
tree
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commitdiff
2016-01-28
gmungoc
Merge branch 'develop' into JAL-1705_trialMerge
tree
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commitdiff
2016-01-11
gmungoc
JAL-1989 more unit tests and encapsulation for ColumnSe...
tree
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commitdiff
2015-11-21
gmungoc
JAL-653 JAL-1968 FeaturesFile now handles Jalview or...
tree
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 licencing for new files in src
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-06-05
Jim Procter
JAL-1482 JAL-653 refactor feature file import code...
tree
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commitdiff
2015-06-05
Jim Procter
JAL-1482 refactor setTableData to more sensible name...
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1350 pass the columnselection rather then selected...
tree
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commitdiff
2015-01-22
Charles Ofoegbu
JAL-1553 added applet support for the select-column...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
Further abstractions and clean up
tree
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
tree
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commitdiff
2014-11-14
Jim Procter
Merge branch 'develop' into JAL-1483_featureBasedTreeCalc
tree
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commitdiff
2014-09-23
darolmar
JAL-1355
tree
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commitdiff
2014-08-08
j.procter@dundee...
tidy imports
tree
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commitdiff
2014-08-08
j.procter@dundee...
JAL-1483 sort by feature score/density made first class...
tree
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commitdiff
2014-08-08
j.procter@dundee...
JAL-1482 nascent feature settings model and controller...
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1517 source formatting
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
tree
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commitdiff
2014-05-23
Jim Procter
JAL-1445 extend functionality to select or toggle selec...
tree
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commitdiff
2014-02-17
Jim Procter
JAL-1445 ported routine for selecting containing/non...
tree
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commitdiff
2014-02-17
Jim Procter
JAL-535 interface for GUI state update methods that...
tree
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commitdiff
2013-10-07
Jim Procter
JAL-1385 Alignment view controller logic implementation...
tree
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commitdiff