git://source.jalview.org
/
jalview.git
/ history
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
jalview
/
gui
/
AlignFrame.java
2023-11-03
James Procter
JAL-4090 JAL-1551 spotlessApply
blob
|
commitdiff
2023-11-01
James Procter
Merge branch 'feature/JAL-4315_fc_draganddrop' into...
blob
|
commitdiff
|
diff to current
2023-10-31
James Procter
JAL-244 knock on - make sure alignPanel is laid out...
blob
|
commitdiff
|
diff to current
2023-10-30
James Procter
Handle feature settings files loaded via drag and drop...
feature/JAL-4315_fc_draganddrop
blob
|
commitdiff
|
diff to current
2023-10-20
Ben Soares
JAL-4298 Remove a stray return in the processGroovyScri...
blob
|
commitdiff
|
diff to current
2023-10-19
Ben Soares
JAL-4305 Isolate and unify the Jalview object from...
blob
|
commitdiff
|
diff to current
2023-10-13
Ben Soares
JAL-3783 Updated groovy jars. Requires javaparser...
blob
|
commitdiff
|
diff to current
2023-09-11
Ben Soares
JAL-4277 --mkdirs with cautious refusal for paths with ..
blob
|
commitdiff
|
diff to current
2023-09-07
James Procter
JAL-4090 JAL-4160 JAL-4274 image export dimensions...
blob
|
commitdiff
|
diff to current
2023-09-01
Ben Soares
Merge branch 'feature/JAL-629_--output_-_means_output_t...
blob
|
commitdiff
|
diff to current
2023-09-01
Ben Soares
JAL-629 Fix --structureimage and options
blob
|
commitdiff
|
diff to current
2023-08-24
Ben Soares
Merge branch 'bug/JAL-4214_system_freeze_when_opening_f...
blob
|
commitdiff
|
diff to current
2023-08-18
Ben Soares
Merge branch 'improvement/JAL-4206_improve_JalviewFileC...
blob
|
commitdiff
|
diff to current
2023-08-18
Ben Soares
Merge branch 'feature/JAL-244_Automatically_adjust_left...
blob
|
commitdiff
|
diff to current
2023-08-11
Ben Soares
JAL-629 Much better way of dealing with list of filenam...
blob
|
commitdiff
|
diff to current
2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
blob
|
commitdiff
|
diff to current
2023-08-09
Ben Soares
JAL-629 Enable output to STDOUT when specifying output...
blob
|
commitdiff
|
diff to current
2023-08-02
Ben Soares
JAL-244 Fix buglet with automatic change in id column...
blob
|
commitdiff
|
diff to current
2023-07-27
Ben Soares
Merge branch 'develop' into feature/JAL-244_Automatical...
blob
|
commitdiff
|
diff to current
2023-07-27
Ben Soares
JAL-244 Allow adjusting Id column width in wrap mode...
blob
|
commitdiff
|
diff to current
2023-07-20
James Procter
JAL-3855 tree title for PAE matrix tree is PAE Matrix...
patch/JAL-3855_fixup_pae
blob
|
commitdiff
|
diff to current
2023-06-29
Ben Soares
JAL-4214 Linux only: Disable menus when internal modal...
bug/JAL-4214_system_freeze_when_opening_file_using_gui_in_linux
blob
|
commitdiff
|
diff to current
2023-06-13
Ben Soares
JAL-3416 Removed a few more JInternalFrame icons with...
blob
|
commitdiff
|
diff to current
2023-06-07
James Procter
JAL-4195 add exception handling for all image output...
blob
|
commitdiff
|
diff to current
2023-05-26
James Procter
Merge branch 'develop' into features/JAL-4134_use_annot...
blob
|
commitdiff
|
diff to current
2023-05-25
James Procter
JAL-2381 copy and paste sequence also copies contact...
blob
|
commitdiff
|
diff to current
2023-05-25
Ben Soares
JAL-4186 Turn JvOptionPane Callable<Void> handlers...
blob
|
commitdiff
|
diff to current
2023-05-23
Ben Soares
JAL-629 Added --structureimage code and formatting...
blob
|
commitdiff
|
diff to current
2023-05-22
Ben Soares
JAL-629 --structureimage with formatting args.
blob
|
commitdiff
|
diff to current
2023-05-22
James Procter
JAL-4134 only build tree when showing it in the tree...
blob
|
commitdiff
|
diff to current
2023-05-19
James Procter
JAL-1551 spotlessApply
blob
|
commitdiff
|
diff to current
2023-05-11
Ben Soares
JAL-629 Fix --tempfac. Hide non-working --notempfac...
blob
|
commitdiff
|
diff to current
2023-05-02
Ben Soares
JAL-629 Add --renderer arg/subval for vector output...
blob
|
commitdiff
|
diff to current
2023-04-22
Ben Soares
JAL-629 Test and fix --annotation --ssannotation args...
blob
|
commitdiff
|
diff to current
2023-03-20
James Procter
JAL-4134 propagate column selection changes in tree...
blob
|
commitdiff
|
diff to current
2023-03-17
James Procter
JAL-4134 store/restore Newick tree for PAE annotation row
blob
|
commitdiff
|
diff to current
2023-02-27
James Procter
JAL-4134 display tree for columns - selecting an intern...
blob
|
commitdiff
|
diff to current
2023-02-22
Ben Soares
Merge branch 'develop' into features/r2_11_2_alphafold...
blob
|
commitdiff
|
diff to current
2023-02-16
James Procter
Merge branch 'features/r2_11_2_alphafold/JAL-629' into...
blob
|
commitdiff
|
diff to current
2023-02-13
James Procter
Merge branch 'develop' into feature/JAL-1713_overviewIn...
blob
|
commitdiff
|
diff to current
2023-02-03
Ben Soares
JAL-629 Fasta sequence id reading whitespace fix. Flexi...
blob
|
commitdiff
|
diff to current
2023-02-03
James Procter
Merge branch 'develop' into features/r2_11_2_alphafold...
blob
|
commitdiff
|
diff to current
2023-01-31
James Procter
JAL-1713 update from Jalview 2.11.3 develop
blob
|
commitdiff
|
diff to current
2022-11-09
Ben Soares
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG...
blob
|
commitdiff
|
diff to current
2022-11-09
Ben Soares
JAL-3416 Remove all JFrame/JInternalFrame icons (set...
blob
|
commitdiff
|
diff to current
2022-11-04
Ben Soares
JAL-1998 JAL-3772 JAL-3416 Merge conflict resolution...
blob
|
commitdiff
|
diff to current
2022-11-03
Ben Soares
JAL-3416 File Chooser iconified, JvOptionPanes iconifie...
blob
|
commitdiff
|
diff to current
2022-11-03
Ben Soares
JAL-3416 Start to add JInternalFrame icons (to replace...
blob
|
commitdiff
|
diff to current
2022-10-24
Ben Soares
JAL-1988 JAL-3772 Non-blocking modal dialogs for unsave...
blob
|
commitdiff
|
diff to current
2022-09-26
Ben Soares
JAL-1988 JAL-3772 linked undostack to saved changes...
blob
|
commitdiff
|
diff to current
2022-09-16
Jim Procter
JAL-4062 copy highlighted region docs, new Alignment...
blob
|
commitdiff
|
diff to current
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
blob
|
commitdiff
|
diff to current
2022-03-04
Jim Procter
JAL-3746 JAL-3811 document SHOW_JWS2_SERVICES user...
blob
|
commitdiff
|
diff to current
2022-02-11
Jim Procter
JAL-3949 - refactor logging from jalview.bin.Cache...
blob
|
commitdiff
|
diff to current
2022-02-11
Ben Soares
JAL-3949 Complete new abstracted logging framework...
blob
|
commitdiff
|
diff to current
2022-02-07
Jim Procter
Merge branch 'feature/JAL-1713_overviewInProject' into...
blob
|
commitdiff
|
diff to current
2022-02-07
Jim Procter
JAL-3785 JAL- Merge branch 'bug/JAL-3785autoOverviewTit...
bug/JAL-3785autoOverviewTitle
blob
|
commitdiff
|
diff to current
2021-09-21
Ben Soares
JAL-3691 automatic insertion of Locale.ROOT to toUpperC...
blob
|
commitdiff
|
diff to current
2021-09-21
Jim Procter
Merge branch 'doc/JAL-3746_Release_2_11_2' into develop
blob
|
commitdiff
|
diff to current
2021-09-16
Ben Soares
JAL-3774 combined changes from bug/JAL-3774_splitFrameF...
blob
|
commitdiff
|
diff to current
2021-09-15
Jim Procter
JAL-3638 JAL-3680 fix docs for Alt + Arrow LRUD in...
blob
|
commitdiff
|
diff to current
2021-02-05
Jim Procter
JAL-3811 document SHOW_JWS2_SERVICES user preference...
blob
|
commitdiff
|
diff to current
2020-12-12
gmungoc
JAL-1713 JAL-3119 JAL-3785 refactored get/set Overview...
blob
|
commitdiff
|
diff to current
2020-12-11
gmungoc
JAL-3785 set full title on automatically opened Overvie...
blob
|
commitdiff
|
diff to current
2020-12-11
gmungoc
JAL-1713 fix typo; overview in project with open overvi...
blob
|
commitdiff
|
diff to current
2020-12-10
gmungoc
JAL-3784 null the right overview reference when it...
blob
|
commitdiff
|
diff to current
2020-12-10
gmungoc
JAL-3119 include view name (if any) in Overview title
blob
|
commitdiff
|
diff to current
2020-12-10
gmungoc
JAL-1713 refactorings to allow save/restore Overview...
blob
|
commitdiff
|
diff to current
2020-11-13
Ben Soares
JAL-3775 Eclipse re-formatting commit
blob
|
commitdiff
|
diff to current
2020-11-12
Ben Soares
JAL-3633 ensure check both or https:// for urls
blob
|
commitdiff
|
diff to current
2020-11-12
Ben Soares
JAL-3628 Error when saving alert box has been moved...
blob
|
commitdiff
|
diff to current
2020-11-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
blob
|
commitdiff
|
diff to current
2020-11-10
Ben Soares
JAL-3628 Fixed oddly worded and non-formatted error...
blob
|
commitdiff
|
diff to current
2020-11-10
Ben Soares
JAL-3628 Even more Cache.log.debug statements
blob
|
commitdiff
|
diff to current
2020-11-10
Ben Soares
JAL-3628 More Cache.log.debug statements
blob
|
commitdiff
|
diff to current
2020-09-23
Ben Soares
JAL-3633 ensure check both or https:// for urls
blob
|
commitdiff
|
diff to current
2020-09-21
Jim Procter
Merge branch 'merge_review/JAL-3490_2_11_2_develop...
blob
|
commitdiff
|
diff to current
2020-08-31
Jim Procter
JAL-3732 - sequences can be moved up/down in cursor...
blob
|
commitdiff
|
diff to current
2020-08-31
Jim Procter
JAL-3732 - sequences can be moved up/down in cursor...
blob
|
commitdiff
|
diff to current
2020-08-17
Jim Procter
JAL-3490 merged with 2.11.2 develop
blob
|
commitdiff
|
diff to current
2020-08-17
Jim Procter
Merge branch 'patch/Release_2_11_1_Branch_patch_JAL...
blob
|
commitdiff
|
diff to current
2020-08-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
blob
|
commitdiff
|
diff to current
2020-07-08
Ben Soares
Merge branch 'releases/Release_2_11_1_Branch' into...
blob
|
commitdiff
|
diff to current
2020-07-07
Ben Soares
JAL-3628 Fixed oddly worded and non-formatted error...
blob
|
commitdiff
|
diff to current
2020-07-06
Ben Soares
JAL-3628 Even more Cache.log.debug statements
blob
|
commitdiff
|
diff to current
2020-07-04
Jim Procter
JAL-3638 don’t move cursor to next gap after moving...
blob
|
commitdiff
|
diff to current
2020-07-04
Jim Procter
JAL-3680 check whether a sequence selection exists...
blob
|
commitdiff
|
diff to current
2020-07-04
Jim Procter
JAL-3638 shift+arrow keys in cursor mode jumps cursor...
blob
|
commitdiff
|
diff to current
2020-07-04
Ben Soares
JAL-3628 More Cache.log.debug statements
blob
|
commitdiff
|
diff to current
2020-06-29
Jim Procter
JAL-3493 clear search highlights when escape/deselect all
blob
|
commitdiff
|
diff to current
2020-06-29
Jim Procter
JAL-3493 clear search highlights when escape/deselect all
blob
|
commitdiff
|
diff to current
2020-06-29
Jim Procter
Merge branch 'bug/JAL-3490findSpanHiddenGaps' into...
blob
|
commitdiff
|
diff to current
2020-05-19
gmungoc
Merge branch 'develop' into feature/JAL-3551Pymol
blob
|
commitdiff
|
diff to current
2020-04-21
gmungoc
JAL-3603 load annotation file from RELATIVE_URL in...
blob
|
commitdiff
|
diff to current
2020-03-30
gmungoc
Merge branch 'develop' into Jalview-JS/develop
blob
|
commitdiff
|
diff to current
2020-03-09
gmungoc
Merge branch 'develop' into feature/JAL-2422ChimeraX
blob
|
commitdiff
|
diff to current
2020-02-21
Jim Procter
JAL-3186 avoid repainting twice in splitframe
blob
|
commitdiff
|
diff to current
2020-02-21
Jim Procter
Merge branch 'develop' into features/JAL-3187_uitweaks
blob
|
commitdiff
|
diff to current
2020-02-20
gmungoc
JAL-3187 repaint complement after loading on features
blob
|
commitdiff
|
diff to current
2020-02-19
Jim Procter
JAL-3187 JAL-2764 close feature settings when parent...
blob
|
commitdiff
|
diff to current
next