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[jalview.git] / src / jalview / gui / AnnotationPanel.java

2023-11-21	James Procter	JAL-4345 patch and release notes patch/JAL-4345_pae_epas1_doubleclick	blob \| commitdiff
2023-11-03	James Procter	JAL-4090 JAL-1551 spotlessApply	blob \| commitdiff \| diff to current
2023-09-29	James Procter	JAL-3858 fix check annotation row and column positionin...	blob \| commitdiff \| diff to current
2023-09-28	James Procter	JAL-3858 check annotation row and column positioning...	blob \| commitdiff \| diff to current
2023-09-28	James Procter	JAL-3858 improved contactInterval computation and added...	blob \| commitdiff \| diff to current
2023-09-25	James Procter	JAL-3858 report PAE range with sensible precision	blob \| commitdiff \| diff to current
2023-08-10	Ben Soares	JAL-629 Change all stdout and stderr output to use...	blob \| commitdiff \| diff to current
2023-07-18	James Procter	JAL-3858 fix off-by-one in matrix visualisation and...	blob \| commitdiff \| diff to current
2023-07-18	James Procter	JAL-3858 flip diagonal so matrix visualisation is top...	blob \| commitdiff \| diff to current
2023-06-01	James Procter	JAL-4134 properly resolve positions in associated align... features/JAL-4134_use_annotation_row_for_colours_and_groups	blob \| commitdiff \| diff to current
2023-05-19	James Procter	Merge branch 'develop' into features/JAL-4134_use_annot...	blob \| commitdiff \| diff to current
2023-05-19	James Procter	JAL-1551 spotlessApply	blob \| commitdiff \| diff to current
2023-05-14	James Procter	JAL-2349 store/restore mappable contact matrix in proje...	blob \| commitdiff \| diff to current
2023-05-02	Ben Soares	JAL-629 Add --renderer arg/subval for vector output...	blob \| commitdiff \| diff to current
2023-05-01	James Procter	JAL-4134 double click to select column groups	blob \| commitdiff \| diff to current
2023-03-20	James Procter	JAL-2349 JAL-4134 Console log messages for contact...	blob \| commitdiff \| diff to current
2023-03-20	James Procter	JAL-4134 propagate column selection changes in tree...	blob \| commitdiff \| diff to current
2023-03-08	James Procter	JAL-2349 handle matrix_clicked on mouse_release rather...	blob \| commitdiff \| diff to current
2023-03-01	James Procter	JAL-4134 hold ctrl to select groups containing rows...	blob \| commitdiff \| diff to current
2023-02-27	James Procter	JAL-4134 TODO: alternative way of performing interactiv...	blob \| commitdiff \| diff to current
2023-02-27	James Procter	JAL-4134 allow tree groups to be stored/recovered on...	blob \| commitdiff \| diff to current
2023-02-22	James Procter	JAL-4095 slightly better threshold setting and todos...	blob \| commitdiff \| diff to current
2023-02-22	James Procter	JAL-4095 magic fill behaviour is PAE specific	blob \| commitdiff \| diff to current
2023-02-22	James Procter	JAL-4027 JAL-3858 rename CUSTOM_RENDERER to CONTACT_MAT...	blob \| commitdiff \| diff to current
2022-11-03	Jim Procter	JAL-3855 JAL-4095 simple picking of ranges adjacent...	blob \| commitdiff \| diff to current
2022-10-30	Jim Procter	JAL-2349 JAL-3855 bizarre resizing exception when resiz...	blob \| commitdiff \| diff to current
2022-10-29	Jim Procter	JAL-4094 shift+click drag up/down to resize all annotat...	blob \| commitdiff \| diff to current
2022-10-22	Jim Procter	JAL-2349 JAL-3855 highlight residues associated with...	blob \| commitdiff \| diff to current
2022-10-21	Jim Procter	JAL-2349 JAL-3855 fix failing tests	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-2349 JAL-3855 ContactListI.getPosition() to recover...	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-3855 JAL-2349 AlignmentI.getContactList takes care...	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-4033 fix drag selections and distinguish row/column...	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-2349 (still buggy) interactive selection - time...	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-2349 tooltip reports value from contact range	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-2349 debugged click/drag and added yellow rubber...	blob \| commitdiff \| diff to current
2022-10-20	Jim Procter	JAL-2349 JAL-3855 - interactive point-wise row/column...	blob \| commitdiff \| diff to current
2022-10-19	Jim Procter	JAL-2349 JAL-4033 refactored contact matrix geom calc...	blob \| commitdiff \| diff to current
2022-06-10	Jim Procter	Merge branch 'features/r2_11_2_alphafold/JAL-2349_JAL...	blob \| commitdiff \| diff to current
2022-06-08	Jim Procter	JAL-4024 only render partially when new view overlaps... patch/JAL-4024_jumpScrollHang	blob \| commitdiff \| diff to current
2022-03-08	Jim Procter	JAL-3438 spotless for 2.11.2.0	blob \| commitdiff \| diff to current
2021-08-11	Jim Procter	Merge branch 'features/JAL-2349_matrixvis' into feature...	blob \| commitdiff \| diff to current
2020-09-03	gmungoc	JAL-3648 resize annotation panel after dragging to...	blob \| commitdiff \| diff to current
2020-09-03	gmungoc	JAL-3648 resize annotation panel after dragging to...	blob \| commitdiff \| diff to current
2020-04-12	gmungoc	JAL-3583 consistent last[Formatted]Tooltip, show once...	blob \| commitdiff \| diff to current
2019-06-18	Jim Procter	Merge branch 'features/JAL-2349_matrixvis' into merge...	blob \| commitdiff \| diff to current
2019-03-13	gmungoc	JAL-3210 merge conflict tidying	blob \| commitdiff \| diff to current
2019-03-13	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2019-03-04	gmungoc	Merge branch 'bug/JAL-3072scrollThread' into merge...	blob \| commitdiff \| diff to current
2019-03-01	gmungoc	Merge branch 'feature/JAL-3093wrappedModeTooltips'...	blob \| commitdiff \| diff to current
2019-01-21	hansonr	isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...	blob \| commitdiff \| diff to current
2019-01-18	hansonr	canvas line/font/pixel fixes; menu accelerators;	blob \| commitdiff \| diff to current
2019-01-15	hansonr	removal of AlignmentFrame lines	blob \| commitdiff \| diff to current
2018-12-10	hansonr	Faster JTable processing; fixes Annotation painting...	blob \| commitdiff \| diff to current
2018-11-22	gmungoc	JAL-3161 limit tooltip and status updates to visible... bug/JAL-3161annotationTooltipRange	blob \| commitdiff \| diff to current
2018-10-17	Jim Procter	Merge branch 'feature/JAL-3063JAXB' into Jalview-BH...	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-3132 set status message when over sequence id or...	blob \| commitdiff \| diff to current
2018-10-01	gmungoc	JAL-3093 show annotation tooltips and status message...	blob \| commitdiff \| diff to current
2018-09-06	Jim Procter	JAL-2854 compute visible annotation panel height and...	blob \| commitdiff \| diff to current
2018-08-27	hansonr	JAL-3026 alignmentFrame.statusBar.setText -> .setStatus	blob \| commitdiff \| diff to current
2018-08-15	gmungoc	JAL-3048 use JS-compatible JvOptionPane method	blob \| commitdiff \| diff to current
2018-08-12	gmungoc	JAL-3026 major update 1/2	blob \| commitdiff \| diff to current
2018-07-26	gmungoc	JAL-3071 turn off 'mousedDragging' when stopping scrolling	blob \| commitdiff \| diff to current
2018-07-26	gmungoc	JAL-3071 IdPanel.ScrollThread for JalviewJS, Javadoc	blob \| commitdiff \| diff to current
2018-07-26	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-3072scroll...	blob \| commitdiff \| diff to current
2018-07-25	gmungoc	JAL-3073 select columns if dragging sideways in a graph... bug/JAL-3072scrollThread	blob \| commitdiff \| diff to current
2018-07-05	gmungoc	JAL-3058 refactored raising JColorChooser for JS compat...	blob \| commitdiff \| diff to current
2018-07-04	gmungoc	JAL-3032 JAL-3048 adjust how colour chooser is shown	blob \| commitdiff \| diff to current
2018-03-08	gmungoc	JAL-2930 use MouseWheelEvent.getPreciseWheelRotation...	blob \| commitdiff \| diff to current
2018-02-28	gmungoc	JAL-2924 no tooltip over null annotation positions bug/JAL-2924nullTooltip	blob \| commitdiff \| diff to current
2018-02-27	Jim Procter	Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104	blob \| commitdiff \| diff to current
2018-02-21	Jim Procter	Merge branch 'bug/JAL-2778again' into releases/Release_...	blob \| commitdiff \| diff to current
2018-01-15	kiramt	JAL-2759 Rename findColumnPosition and adjustForHiddenC...	blob \| commitdiff \| diff to current
2017-11-22	gmungoc	JAL-2069 spike updated with latest (FeatureTypeSettings)	blob \| commitdiff \| diff to current
2017-11-14	kiramt	JAL-2831 Added move viewport event and set up cursor...	blob \| commitdiff \| diff to current
2017-11-06	kiramt	JAL-2778 tidy	blob \| commitdiff \| diff to current
2017-11-03	kiramt	JAL-2778 Changed local repaint to alignment repaint...	blob \| commitdiff \| diff to current
2017-11-01	kiramt	JAL-2778 remove unnecessary code running in repaint	blob \| commitdiff \| diff to current
2017-11-01	kiramt	JAL-2778 added setopaque again, and super.paintComponent(s)	blob \| commitdiff \| diff to current
2017-10-31	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-13	kiramt	JAL-2774 Created single event for update to both start...	blob \| commitdiff \| diff to current
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-07-05	Jim Procter	Merge branch 'develop' into features/JAL-2349_matrixvis	blob \| commitdiff \| diff to current
2017-06-28	kiramt	JAL-2600 updates following review	blob \| commitdiff \| diff to current
2017-06-27	kiramt	JAL-2600 Abandoned fastpaint for resize; now full repai...	blob \| commitdiff \| diff to current
2017-06-27	kiramt	JAL-2600 Add in IdCanvas and checks for 0 size images	blob \| commitdiff \| diff to current
2017-06-27	kiramt	JAL-2600 fast painting on resize	blob \| commitdiff \| diff to current
2017-06-26	kiramt	JAL-2600 reinstate original behaviour	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-09	Jim Procter	Merge branch 'develop' into features/JAL-2349_matrixvis	blob \| commitdiff \| diff to current
2017-05-15	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-05-08	kiramt	JAL-2491 Started moving other scrolling fns into viewpo...	blob \| commitdiff \| diff to current
2017-05-02	kiramt	JAL-2491 first addition of new event	blob \| commitdiff \| diff to current
2017-04-24	kiramt	JAL-2388 Hidden cols separated from column selection...	blob \| commitdiff \| diff to current
2017-03-16	kiramt	JAL-2388 Applied ViewportRanges to code	blob \| commitdiff \| diff to current
2017-02-27	kiramt	JAL-2388 Make startRes,startSeq,endRes,endSeq private...	blob \| commitdiff \| diff to current
2016-12-04	Jim Procter	JAL-2348 adjustable height for any non-label render...	blob \| commitdiff \| diff to current
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