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[jalview.git] / src / jalview / gui / PopupMenu.java

2022-12-14	Jim Procter	Merge branch 'develop' into update_212_Dec_merge_with_2...	blob \| commitdiff
2022-11-21	Jim Procter	Merge commit 'alpha/update_2_12_for_2_11_2_series_merge...	blob \| commitdiff \| diff to current
2022-03-24	Jim Procter	JAL-3981 strategic newlines to help speed up Java's...	blob \| commitdiff \| diff to current
2022-03-08	Jim Procter	JAL-3438 spotless for 2.11.2.0	blob \| commitdiff \| diff to current
2022-02-11	Jim Procter	JAL-3949 - refactor logging from jalview.bin.Cache...	blob \| commitdiff \| diff to current
2022-02-11	Ben Soares	JAL-3949 Complete new abstracted logging framework...	blob \| commitdiff \| diff to current
2022-01-28	Jim Procter	Merge branch 'merge/develop_JAL-3725' into develop	blob \| commitdiff \| diff to current
2022-01-26	Jim Procter	Merge branch 'task/JAL-3763_newDatasetForCds' into...	blob \| commitdiff \| diff to current
2022-01-26	gmungoc	JAL-3725 restrict mapped virtual feature location to...	blob \| commitdiff \| diff to current
2021-10-01	gmungoc	JAL-3725 restrict mapped virtual feature location to...	blob \| commitdiff \| diff to current
2021-09-21	Ben Soares	JAL-3691 automatic insertion of Locale.ROOT to toUpperC...	blob \| commitdiff \| diff to current
2020-12-14	Jim Procter	Merge branch 'Jalview-JS/develop' into merge_js_develop	blob \| commitdiff \| diff to current
2020-10-28	gmungoc	JAL-3725 restrict mapped virtual feature location to...	blob \| commitdiff \| diff to current
2020-10-22	gmungoc	JAL-3763 Javadoc, check for null, additional tests	blob \| commitdiff \| diff to current
2020-10-22	gmungoc	JAL-3763 Javadoc, check for null, additional tests task/JAL-3763_newDatasetForCds	blob \| commitdiff \| diff to current
2020-06-10	BobHanson	JAL-3446 tests - Popup/HTML changes in Applet	blob \| commitdiff \| diff to current
2020-06-09	BobHanson	JAL-3446 from applet; JAL-3374	blob \| commitdiff \| diff to current
2020-06-03	BobHanson	JAL-3446 from JAL-3253 ApplicationSingletonProvider...	blob \| commitdiff \| diff to current
2020-06-02	BobHanson	JAL-3446 from JAL-3253-applet Desktop and Jws2Discovere...	blob \| commitdiff \| diff to current
2020-05-18	Jim Procter	Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into...	blob \| commitdiff \| diff to current
2020-05-18	gmungoc	Merge branch 'Jalview-JS/develop' into develop	blob \| commitdiff \| diff to current
2020-04-23	Jim Procter	Merge branch 'develop' into alpha/JAL-3362_Jalview_212_...	blob \| commitdiff \| diff to current
2020-04-16	gmungoc	JAL-3567 report mapped location for virtual features...	blob \| commitdiff \| diff to current
2020-03-30	gmungoc	Merge branch 'develop' into Jalview-JS/develop	blob \| commitdiff \| diff to current
2019-10-31	gmungoc	JAL-3468 truncate feature description to 40 chars in...	blob \| commitdiff \| diff to current
2019-10-08	gmungoc	Merge branch 'develop' into Jalview-JS/develop	blob \| commitdiff \| diff to current
2019-08-13	Jim Procter	Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into...	blob \| commitdiff \| diff to current
2019-06-28	tva	JAL-2629 add ability to add background frequencies...	blob \| commitdiff \| diff to current
2019-06-17	gmungoc	JAL-2792 JAL-3187 linked features (if shown) in Feature...	blob \| commitdiff \| diff to current
2019-06-17	gmungoc	JAL-3187 add sequence to feature details table (and...	blob \| commitdiff \| diff to current
2019-06-04	Jim Procter	Merge branch 'develop' into developtomchmmer	blob \| commitdiff \| diff to current
2019-04-03	hansonr	replacing @j2sNative with @j2sIgnore where appropriate...	blob \| commitdiff \| diff to current
2019-04-03	hansonr	j2sNative clean-up. Fixes problem with second try of...	blob \| commitdiff \| diff to current
2019-03-28	gmungoc	Merge branch 'develop' into Jalview-JS/develop	blob \| commitdiff \| diff to current
2019-03-28	gmungoc	Merge branch 'feature/JAL-3181linkOrdering' into develop	blob \| commitdiff \| diff to current
2019-03-27	hansonr	isJS cleanup	blob \| commitdiff \| diff to current
2019-03-13	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2019-03-11	gmungoc	Merge branch 'feature/JAL-3127_seqidChainshading' into...	blob \| commitdiff \| diff to current
2019-03-07	gmungoc	Merge branch 'feature/JAL-3180colourAnnotationMenu...	blob \| commitdiff \| diff to current
2019-02-05	gmungoc	JAL-3048 JS-compatible confirm dialog on delete all	blob \| commitdiff \| diff to current
2019-01-26	hansonr	Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...	blob \| commitdiff \| diff to current
2019-01-08	gmungoc	JAL-3180 Disabled 'By Annotation' group colour menu... feature/JAL-3180colourAnnotationMenu	blob \| commitdiff \| diff to current
2019-01-04	gmungoc	JAL-3181 refactor: extracted buildLinkMenu() for testab... feature/JAL-3181linkOrdering	blob \| commitdiff \| diff to current
2019-01-03	gmungoc	JAL-3181 order link menu items	blob \| commitdiff \| diff to current
2018-12-18	gmungoc	JAL-3048 DialogRunnerI reduced to minimal implementation	blob \| commitdiff \| diff to current
2018-11-30	gmungoc	JAL-2420 don't offer Reveal All over alignment panel bug/JAL-2420revealAllMenu	blob \| commitdiff \| diff to current
2018-10-09	Jim Procter	JAL-3127 pass reference to AlignViewportI when creating...	blob \| commitdiff \| diff to current
2018-08-20	gmungoc	JAL-3032 variant of Sequence Details panel for JalviewJS	blob \| commitdiff \| diff to current
2018-07-16	gmungoc	JAL-3060 more extensive extract method refactoring...	blob \| commitdiff \| diff to current
2018-07-11	Jim Procter	JAL-3026 JLabel for SequenceFeature details in jalview-js	blob \| commitdiff \| diff to current
2018-07-09	gmungoc	JAL-3048 EditNameDialog modified for JalviewJS (layout...	blob \| commitdiff \| diff to current
2018-07-09	gmungoc	JAL-3060 entry points for createFeatures, amendFeatures	blob \| commitdiff \| diff to current
2018-07-09	gmungoc	JAL-3060 extract FeatureEditor class task/JAL-3060featureEditor	blob \| commitdiff \| diff to current
2018-07-06	Jim Procter	JAL-3048 amendFeatures as dialog runner - repaint after...	blob \| commitdiff \| diff to current
2018-07-05	gmungoc	JAL-3058 refactored raising JColorChooser for JS compat...	blob \| commitdiff \| diff to current
2018-04-17	gmungoc	JAL-2629 choice of hmm profile now a parameter not...	blob \| commitdiff \| diff to current
2018-04-16	gmungoc	JAL-2629 JAL-2937 remove redundant is/setHMMConsensusSe...	blob \| commitdiff \| diff to current
2018-03-30	gmungoc	JAL-2629 select HMM selects sequence under cursor	blob \| commitdiff \| diff to current
2018-03-16	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2018-03-07	Jim Procter	Merge branch 'releases/Release_2_10_4_Branch' into...	blob \| commitdiff \| diff to current
2018-02-20	gmungoc	Merge branch 'develop' into features/mchmmer	blob \| commitdiff \| diff to current
2018-02-02	gmungoc	JAL-984 merged to spikes-mungo	blob \| commitdiff \| diff to current
2018-01-31	gmungoc	JAL-2792 added tooltip to menu items in case of truncation	blob \| commitdiff \| diff to current
2018-01-31	kiramt	JAL-2759 minor refactor to hiding bitsets	blob \| commitdiff \| diff to current
2018-01-16	kiramt	JAL-2759 setup hideBitSet over range for hideInsertions	blob \| commitdiff \| diff to current
2018-01-15	kiramt	JAL-2759 Minor doc and naming changes	blob \| commitdiff \| diff to current
2017-11-07	gmungoc	JAL-2069 update spike branch with latest	blob \| commitdiff \| diff to current
2017-11-06	gmungoc	JAL-2820 include attribute value used for feature colou...	blob \| commitdiff \| diff to current
2017-10-27	gmungoc	JAL-1793 spike branch updated to latest	blob \| commitdiff \| diff to current
2017-10-26	gmungoc	JAL-2792 html table for Feature Details report	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	Merge branch 'develop' into features/JAL-1793VCF; lambd...	blob \| commitdiff \| diff to current
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff \| diff to current
2017-10-05	gmungoc	JAL-2738 update spikes/mungo	blob \| commitdiff \| diff to current
2017-10-05	gmungoc	JAL-2744 add score to feature details report, descripti...	blob \| commitdiff \| diff to current
2017-10-04	gmungoc	JAL-2744 handle null features list	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-09-28	gmungoc	JAL-2744 simple Feature Details report from Popup menu	blob \| commitdiff \| diff to current
2017-09-28	gmungoc	JAL-2744 refactor PopupMenu constructor to enable addin...	blob \| commitdiff \| diff to current
2017-09-05	Jim Procter	Merge branch 'master' into portforward/JAL-2675_2102b1t...	blob \| commitdiff \| diff to current
2017-09-03	Jim Procter	Merge branch 'feature/JAL-2587' into documentation...	blob \| commitdiff \| diff to current
2017-08-25	TZVanaalten	JAL-2629 remove sequence and group HMMER options	blob \| commitdiff \| diff to current
2017-08-25	kiramt	JAL-2587 Removed annoying double repaint on hide insertions	blob \| commitdiff \| diff to current
2017-08-23	tzvanaalten	JAL-2629 selected HMM is now a sequence, not a HMM	blob \| commitdiff \| diff to current
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-08-18	TZVanaalten	Merge branch 'develop' into features/hmmer	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-08-15	TZVanaalten	JAL-2629 selected HMM name now shown in HMMER menu	blob \| commitdiff \| diff to current
2017-08-13	TZVanaalten	JAL-2629 hmmalign can now be run from the sequence...	blob \| commitdiff \| diff to current
2017-08-11	TZVanaalten	JAL-2629 add ability to select HMMs	blob \| commitdiff \| diff to current
2017-07-25	TZVanaalten	JAL-2629 add non-functional HMMER menu	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-06-27	gmungoc	JAL-1858 repaint after Amend Features dialog	blob \| commitdiff \| diff to current
2017-06-27	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2594 avoid stack trace creating feature on gapped...	blob \| commitdiff \| diff to current
2017-06-05	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-06-04	Jim Procter	JAL-2291 only hide/show columns intersecting with curre...	blob \| commitdiff \| diff to current
2017-06-04	Jim Procter	JAL-2291 use HiddenColumns.hideMarkedBits and take...	blob \| commitdiff \| diff to current
2017-06-04	Jim Procter	JAL-2291 ‘Hide Insertions’ now operates on selection...	blob \| commitdiff \| diff to current
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