| 2017-02-08 |
gmungoc | JAL-2405 set context on selection group for tailored... |
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| 2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
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| 2017-01-23 |
gmungoc | JAL-2386 unit tests for change colour (and minor refact... |
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| 2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-20 |
gmungoc | JAL-2383 make popup colour menu order and wording consi... |
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| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project... |
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| 2017-01-17 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-11 |
gmungoc | JAL-2344 FileFormats singleton for formats, FileFormatI... |
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| 2017-01-05 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-05 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-05 |
gmungoc | JAL-2373 set state of Above PID, By Conservation in... |
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| 2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
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| 2016-12-22 |
gmungoc | JAL-2360 fix bug that prematurely created a SequenceGroup |
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| 2016-12-22 |
gmungoc | JAL-2360 structure viewers now using ColourMenuHelper... |
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| 2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
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| 2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
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| 2016-12-19 |
gmungoc | JAL-2361 select colour menu item by matching its name... |
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| 2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
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| 2016-12-13 |
gmungoc | JAL-2361 adding items to applet colour menus, TCoffee... |
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| 2016-12-12 |
gmungoc | JAL-2361 extract methods to (re-)build colour menu |
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| 2016-11-28 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-25 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-24 |
gmungoc | Distinguish text-only output formats and others (.jar... |
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| 2016-11-24 |
tcofoegbu | JAL-2326 updated references of JOptionPane to JvOptionPane |
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| 2016-11-24 |
gmungoc | FileFormatI further tweaks, clean compile |
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| 2016-11-16 |
Jim Procter | Merge branch 'features/JAL-1723_sequenceReport' into... |
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| 2016-11-03 |
kiramt | JAL-2282 Link menu disabled if there are no valid links |
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| 2016-11-02 |
kiramt | Merge remote-tracking branch 'origin/bug/JAL-2282'... |
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| 2016-11-02 |
gmungoc | JAL-98 JAL-1854 encapsulate 'magic number' threshold... |
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| 2016-11-01 |
kiramt | JAL-2282 Refactor SequenceAnnotationReport to use refac... |
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| 2016-11-01 |
kiramt | JAL-2282 Refactored URL link creation into UrlLink |
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| 2016-10-31 |
gmungoc | Merge branch 'develop' into features/JAL-1723_sequenceR... |
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| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
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| 2016-10-22 |
kiramt | Working links menu |
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| 2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
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| 2016-10-05 |
Jim Procter | JAL-2189 source formatting |
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| 2016-09-22 |
gmungoc | JAL-1421 typed ResidueProperties.propHash; JAL-2176... |
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| 2016-08-30 |
gmungoc | Merge branch 'develop' into features/filetypeEnum |
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| 2016-08-24 |
gmungoc | JAL-1424 removed two redundant (overwritten) setText... |
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| 2016-08-10 |
gmungoc | JAL-2124 i18n of "All" menu item |
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| 2016-07-18 |
gmungoc | fileFormat enum wip changes |
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| 2016-06-27 |
gmungoc | JAL-2133 refactored duplicated code to AlignmentViewport |
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| 2016-06-20 |
tcofoegbu | JAL-1823 Deleted two obsolete methods in PopupMenu... |
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| 2016-05-27 |
gmungoc | JAL-1942 small tidy (formatting, explict imports, typed... |
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| 2016-04-14 |
gmungoc | JAL-1421 typed map / lists, explicit imports, method... |
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| 2016-04-12 |
gmungoc | JAL-1723 tooltip dbrefs sorted and limited to two per... |
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| 2016-03-30 |
tcofoegbu | JAL-1668 further clean-up of popup menu and NPE check... |
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| 2016-03-28 |
tcofoegbu | JAL-1668 removed redundant UI elements in PopupMenu... |
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| 2015-10-22 |
tcofoegbu | JAL-1942 JAL-1479 DBRefFetcher refactor |
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| 2015-10-16 |
Jim Procter | JAL-1925 update source version in license Release_2_9_0b2 |
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| 2015-10-15 |
tcofoegbu | JAL-1479 refactored SequenceI interface - changed getDB... |
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| 2015-10-08 |
Jim Procter | JAL-1894 update year/version in copyright |
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| 2015-09-10 |
Jim Procter | JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... |
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| 2015-09-10 |
Jim Procter | JAL-1645 source formatting and organise imports |
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| 2015-09-10 |
Jim Procter | JAL-1370 correct i18n message for reference sequence... |
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| 2015-09-06 |
Jim Procter | JAL-1645 JAL-1355 UI/i18n: added missing messages,... |
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| 2015-08-07 |
tcofoegbu | JAL-1824 updated caching procedure for pdb entries... |
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| 2015-07-16 |
Jim Procter | revision for JAL-1749 - ensure view 2D structure menu... |
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| 2015-07-03 |
gmungoc | Merge branch 'develop' into features/JAL-892varnaToProject |
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| 2015-07-01 |
gmungoc | Merge branch 'develop' into features/JAL-1759jmolUpdate |
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| 2015-06-30 |
tcofoegbu | JAL-1641 round trip test/refactoring |
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| 2015-06-26 |
gmungoc | Merge branch 'develop' into features/JAL-892varnaToProject |
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| 2015-06-26 |
gmungoc | Merge branch 'develop' into features/JAL-1759jmolUpdate |
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| 2015-06-22 |
Jim Procter | JAL-1780 JAL-653 Format/AppletFormat import and export... |
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| 2015-06-22 |
gmungoc | JAL-892 tidy Varna panel names; JAL-1789 simplified... |
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| 2015-06-18 |
gmungoc | JAL-892 JAL-1779 save/restore Varna viewer to/from... |
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| 2015-05-28 |
tcofoegbu | JAL-1749 reinstated the ability to view RNA structures |
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| 2015-05-11 |
tcofoegbu | JAL-1641 cherry-picked changes into develop compatible... |
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| 2015-03-26 |
gmungoc | Merge develop to Release_2_8_3_Branch |
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| 2015-03-25 |
tcofoegbu | JAL-1667 clean up commented codes in PopupMenu.java... |
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| 2015-03-15 |
Charles Ofoegbu | JAL-1667 updated test and internationalization messages |
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| 2015-03-06 |
Jim Procter | JAL-1683 replace year/version strings with tokens in... |
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| 2015-03-06 |
Jim Procter | Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... |
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| 2015-03-04 |
Charles Ofoegbu | JAL-1668 First version JAL-1668 |
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| 2015-02-19 |
gmungoc | JAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor |
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| 2015-01-18 |
Jim Procter | JAL-1372 i18n and tweaking set/unset representative... |
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| 2015-01-18 |
Jim Procter | JAL-1628 method to hide insertions to current sequence... |
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| 2015-01-09 |
Jim Procter | Merge branch 'JAL-1372_referenceseq' into feature_29... |
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| 2014-12-22 |
Jim Procter | Merge: 497958b 68dcaa7 |
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| 2014-12-15 |
Jim Procter | JAL-1620 version bump and release notes |
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| 2014-12-05 |
Charles Ofoegbu | JAL-1605 merge commit |
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| 2014-12-05 |
Charles Ofoegbu | Change the Html export to utilize svg |
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| 2014-11-28 |
gmungoc | JAL-1610 check reference annotations against alignment... |
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| 2014-11-25 |
gmungoc | JFAL-1594 fix Undo bug; enum EditCommand.Action; basic... |
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| 2014-11-23 |
Jim Procter | JAL-1569 remove stdout on parsing RNA |
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| 2014-11-23 |
Jim Procter | JAL-1152 avoid NPE on null alignment annotation vector |
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| 2014-11-21 |
Jim Procter | JAL-1592 JAL-1489 avoid invalid RNA structure and disti... |
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| 2014-11-14 |
Jim Procter | Merge branch 'develop' into JAL-1483_featureBasedTreeCalc |
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| 2014-11-03 |
Jim Procter | Merge branch 'develop' into features/JAL-1152annotation... |
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| 2014-10-31 |
gmungoc | JAL-1152 menu tweaks plus new option to put Autocalc... |
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| 2014-10-30 |
Jim Procter | Merge branch 'develop' into features/ssFromPDBEntry |
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| 2014-10-30 |
gmungoc | JAL-1152 with sticky annotation sort order that updates... |
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| 2014-10-30 |
Jim Procter | JAL-674 register PDB IDs when ever they are resolved... |
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| 2014-10-30 |
gmungoc | JAL-1152 prototype of new Annotations menu with sort... |
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| 2014-10-28 |
gmungoc | JAL-1264 refactor to add menu options to _both_ sequenc... |
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| 2014-10-23 |
gmungoc | JAL-1264 further refactoring and tests |
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| 2014-10-10 |
gmungoc | JAL-1481 wrap tooltip in html |
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| 2014-10-07 |
gmungoc | JAL-1264 wip |
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