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JAL-2349 javadoc dummy contact matrix
[jalview.git]
/
src
/
jalview
/
gui
/
Preferences.java
2016-11-28
gmungoc
Merge branch 'develop' into trialMerge
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2016-11-25
gmungoc
Merge branch 'develop' into trialMerge
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diff to current
2016-11-24
tcofoegbu
JAL-2326 updated references of JOptionPane to JvOptionPane
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diff to current
2016-11-24
gmungoc
Further tweaks to get tests passing
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diff to current
2016-11-04
kiramt
JAL-2315 Clear sequenceURLLinks if all sequence links...
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diff to current
2016-11-02
kiramt
JAL-2282 Renamed internal use of sequence id / db acces...
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diff to current
2016-10-31
kiramt
Use ACCESSION_ID for database accession id, and SEQUENC...
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diff to current
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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diff to current
2016-10-24
kiramt
Correct Preferences to check for SEQUENCE_NAME as well...
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diff to current
2016-10-22
kiramt
Working links menu
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diff to current
2016-10-21
kiramt
Factored URL Link constants out into UrlConstants file.
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diff to current
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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diff to current
2016-10-05
Jim Procter
JAL-2189 source formatting
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diff to current
2016-08-30
gmungoc
Merge branch 'develop' into features/filetypeEnum
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diff to current
2016-07-12
gmungoc
FileFormat enum wip changes
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diff to current
2016-07-11
gmungoc
file format enum wip changes
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diff to current
2016-05-27
gmungoc
JAL-1911 use existing object when setting 'Prompt each...
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diff to current
2016-05-27
tcofoegbu
JAL-1911 further improvement to bugfix - do not save...
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diff to current
2016-05-26
tcofoegbu
JAL-1911 improvement to bugfix - do not save i18n text...
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diff to current
2016-05-26
tcofoegbu
JAL-1911 bugfix - do not save i18n text in preference...
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diff to current
2016-04-14
gmungoc
JAL-1421 type parameter added to some collections
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diff to current
2016-04-12
gmungoc
JAL-2050 only hide introns if exons are present! Remove...
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diff to current
2016-04-11
gmungoc
JAL-1705 (new preference option to) hide introns when...
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diff to current
2015-11-25
tcofoegbu
JAL-1479 bugfix after decoupling SIFTS preference settings
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diff to current
2015-11-17
tcofoegbu
JAL-1479 Refactored Sifts configuration preference...
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diff to current
2015-10-22
tcofoegbu
JAL-1479 implemented preferences for SIFTs / Needleman...
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diff to current
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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commitdiff
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diff to current
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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diff to current
2015-09-02
gmungoc
JAL-1768 set initial 'enabled' state for id width label...
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diff to current
2015-09-02
gmungoc
JAL-1768 enable fixed width output when auto-width...
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diff to current
2015-08-18
tcofoegbu
JAL-1835 added UI for BioJSON embbeding preference
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diff to current
2015-04-13
gmungoc
JAL-1695 new property ENABLE_SPLIT_FRAME
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diff to current
2015-04-02
gmungoc
JAL-1690 'scale protein as cDNA' options in Preferences...
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diff to current
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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diff to current
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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diff to current
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
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diff to current
2015-01-07
gmungoc
JAL-1588 refactoring to StructureViewerBase and related
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diff to current
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
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diff to current
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-11-27
gmungoc
JAL-1603 if Chimera selected in Preferences, warn if...
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2014-11-18
gmungoc
Merge branch 'Release_2_8_2_Branch' of https://source...
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diff to current
2014-11-18
Jim Procter
JAL-674 make temperature factor, local secondary struct...
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2014-11-17
gmungoc
JAL-1586 chimera file chooser added, validate on OK...
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diff to current
2014-11-17
gmungoc
JAL-1528 new Preference CHIMERA_PATH (Preferences ...
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2014-11-13
gmungoc
JAL-1528 new Preference CHIMERA_PATH (Preferences ...
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2014-11-05
gmungoc
JAL-1152 new Structure tab on Preferences for SS deriva...
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diff to current
2014-11-03
gmungoc
JAL-1152 annotation sorting preferences and help docume...
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diff to current
2014-09-23
darolmar
JAL-1355
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diff to current
2014-09-19
darolmar
JAL-1355
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diff to current
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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diff to current
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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diff to current
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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diff to current
2014-04-21
Jim Procter
JAL-1383 scrubbed envision GUI and documentation
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diff to current
2014-02-03
Jim Procter
Merge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
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diff to current
2014-02-03
Jim Procter
Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
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diff to current
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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diff to current
2014-01-13
Jim Procter
Merge branch 'JAL-1422_srs' into JAL-1422_srs_r281
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diff to current
2014-01-13
Jim Procter
JAL-1422 update any existing configuration to replace...
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diff to current
2014-01-13
Jim Procter
JAL-1422 change default link to EMBL-EBI Search
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diff to current
2013-12-25
darolmar
JAL-1355 (basic i18n support)
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diff to current
2013-08-29
darolmar
i18n
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diff to current
2012-11-08
jprocter
tidy imports
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diff to current
2012-10-22
jprocter
Jalview 2.8 Source Header
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diff to current
2012-10-03
jprocter
formatting
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diff to current
2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into develop
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diff to current
2011-11-09
jprocter
(JAL-985,JAL-986) documentation and tooltips
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diff to current
2011-11-09
jprocter
(JAL-985,JAL-986) preference widgets for settings
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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diff to current
2011-09-27
jprocter
apply version 2.7 copyright
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diff to current
2011-09-16
jprocter
JAL-468 JAL-936 sort alignment by tree and autosort...
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diff to current
2011-08-17
jprocter
fix for JAL-888
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diff to current
2011-07-28
jprocter
refer to local default setting for proxy when connecting to
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diff to current
2011-07-25
jprocter
use proper encoding for storing colour as user preferen...
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diff to current
2011-07-22
jprocter
default parameter for colours in annotation shading...
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diff to current
2010-09-23
jprocter
apply jalview code style
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diff to current
2010-09-23
jprocter
Jalview 2.6 source licence
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diff to current
2010-09-17
jprocter
make sure web service menu is always refreshed on 'OK'
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diff to current
2010-08-04
jprocter
reorganised colourscheme enumeration to make it easier...
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diff to current
2010-06-19
jprocter
new web services preference tab (JAL-589)
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diff to current
2010-04-30
jprocter
jalview 2.5 release banner
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diff to current
2010-04-15
jprocter
ID tooltip preference settings and doc
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diff to current
2010-04-14
jprocter
profile visualizations are now logos
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diff to current
2010-04-01
jprocter
refactored copy of groupURL mechanism into new Envision...
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diff to current
2010-03-30
jprocter
group autoannotation and consensus display settings
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diff to current
2010-02-10
jprocter
commented out enfin/envision2 sequence submission URL...
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diff to current
2010-02-09
jprocter
groupURL link preference variables
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diff to current
2009-10-13
jprocter
added preferences for usage stats, questionnaire check...
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diff to current
2009-06-08
jprocter
apply gpl development license
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diff to current
2009-02-06
jprocter
showUnconserved view and group setting
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diff to current
2008-09-04
jprocter
merge from 2_4_Release branch
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diff to current
2008-08-15
jprocter
allow '|' in regex for URL links to be recovered from...
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diff to current
2007-10-26
jprocter
use new utility class for platform info
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diff to current
2007-08-13
jprocter
fixed typo in new 2_3 startup file default value
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diff to current
2007-05-04
amwaterhouse
New example file for version 2.3
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diff to current
2007-02-09
jprocter
added 'show overview' preference.
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diff to current
2007-02-07
amwaterhouse
Formatting
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diff to current
2007-01-29
amwaterhouse
ID_ITALICS option in preferences
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