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JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
jalview
/
gui
/
SequenceFetcher.java
2023-11-03
Ben Soares
JAL-4239 Using own id generation to avoid Random.nextLo...
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commitdiff
2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
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diff to current
2022-11-09
Ben Soares
JAL-3416 Remove all JFrame/JInternalFrame icons (set...
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diff to current
2022-11-03
Ben Soares
JAL-3416 Start to add JInternalFrame icons (to replace...
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diff to current
2022-02-11
Jim Procter
JAL-3949 - refactor logging from jalview.bin.Cache...
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diff to current
2022-02-11
Ben Soares
JAL-3949 Complete new abstracted logging framework...
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diff to current
2021-09-29
Ben Soares
JAL-3885 Made the database JComboBox have StringPair...
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diff to current
2021-09-02
Jim Procter
Merge branch 'develop' into features/r2_11_2/JAL-3829_3...
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diff to current
2021-09-02
gmungoc
JAL-3509 JAL-1842 minor tidying of code
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diff to current
2021-08-30
Jim Procter
JAL-3829 3d-beacons has a custom alignment retrieval...
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diff to current
2021-04-06
Jim Procter
JAL-3832 dummy 3d-beacons database client and code...
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diff to current
2020-02-06
gmungoc
JAL-3509 JAL-1842 minor tidying of code
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diff to current
2019-07-16
gmungoc
JAL-3144 better error message if no database selected
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2019-01-30
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of
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diff to current
2019-01-30
gmungoc
JAL-3144 don't change comma to semi-colon if not requested!
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diff to current
2019-01-30
hansonr
woops.
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commitdiff
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diff to current
2019-01-30
hansonr
fixes unidentified Java problem
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commitdiff
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2019-01-26
hansonr
Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
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diff to current
2019-01-21
hansonr
added Platform settings separating mouse use of win...
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diff to current
2019-01-21
hansonr
isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
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2018-10-30
gmungoc
JAL-3144 left aligned looks better (and works in Jalvie...
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diff to current
2018-10-30
gmungoc
JAL-3144 close SequenceFetcher before opening PDB/Unipr...
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diff to current
2018-10-30
gmungoc
JAL-3144 spelling, Javadoc, abstract method for JalviewJS
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diff to current
2018-10-29
gmungoc
JAL-3144 SequenceFetcher without JDatabaseTree
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2018-10-04
gmungoc
JAL-3132 set status message when over sequence id or...
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2018-08-27
hansonr
JAL-3026 alignmentFrame.statusBar.setText -> .setStatus
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2018-06-27
hansonr
JAL-3032 just the changes pulled already
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2018-06-26
Jim Procter
Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...
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2018-06-26
Jim Procter
JAL-3035 - jalview-das is no more !
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2018-06-22
gmungoc
JAL-3032 avoid assignments on the same line as synchronized
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commitdiff
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2018-04-12
gmungoc
JAL-2944 tidies for review comments
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2017-11-15
gmungoc
JAL-2835 spike updated with latest
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2017-11-07
Jim Procter
JAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher...
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diff to current
2017-11-07
Jim Procter
JAL-2810 working back button shown for bulk ID retrieva...
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commitdiff
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2017-10-27
Jim Procter
JAL-2810 prototype retrieve ID tab for the Uniprot...
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2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
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2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-06-09
gmungoc
JAL-2446 merged to spike branch
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2017-05-12
gmungoc
JAL-2480 efficient test for features present on sequence
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2017-04-10
tcofoegbu
JAL-2473 added improvement to apply default / custom...
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2016-11-28
gmungoc
Merge branch 'develop' into trialMerge
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2016-11-25
gmungoc
Merge branch 'develop' into trialMerge
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2016-11-24
tcofoegbu
JAL-2326 updated references of JOptionPane to JvOptionPane
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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2016-10-05
Jim Procter
JAL-2189 source formatting
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2016-08-30
Jim Procter
Merge branch 'develop' into merge/develop_bug/JAL-2154p...
merge/develop_bug/JAL-2154projectMappings
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2016-08-30
gmungoc
JAL-2183 simplified database tree actionPerformed,...
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2016-08-30
gmungoc
JAL-2183 removed redundant (overriden) add panel to...
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2016-08-30
gmungoc
Merge branch 'develop' into features/filetypeEnum
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2016-08-13
Jim Procter
JAL-2154 ignore all but the primary source resolved...
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2016-08-13
Jim Procter
JAL-2154 make sure we wait for constructor thread to...
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2016-08-11
Jim Procter
JAL-2154 jalview.gui.SequenceFetcher.fetchAndShow(db...
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2016-08-11
Jim Procter
JAL-2154 JAL-1993 relocate show dbchooser action out...
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2016-07-12
gmungoc
FileFormat enum wip changes
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2016-06-21
Jim Procter
Merge branch 'features/JAL-2110_crossRefDuplications...
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2016-06-16
gmungoc
JAL-1993 close sequence fetcher when opening database...
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diff to current
2016-06-16
gmungoc
JAL-1993 hide sequence fetcher dialogue until database...
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diff to current
2016-06-03
gmungoc
JAL-2110 random stuff
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2016-05-26
gmungoc
JAL-1993 open sequence fetcher tree on 'fetch sequences'
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2016-05-03
gmungoc
JAL-2050 hide introns also when fetching Ensembl xrefs...
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2016-04-29
tcofoegbu
merge
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diff to current
2016-04-29
gmungoc
JAL-2051 better checking of retrieved / duplicated...
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commitdiff
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2016-04-27
tcofoegbu
re-enabled new uniprot sequence fetcher on spike branch
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2016-04-26
tcofoegbu
JAL-1563 reverted to old uniprot fetcher to enable...
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diff to current
2016-04-22
tcofoegbu
JAL-2071 further refactoring, optimisation, and house...
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commitdiff
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diff to current
2016-04-19
tcofoegbu
JAL-2071 architectural improvement for Plugable Free...
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commitdiff
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diff to current
2016-04-12
gmungoc
JAL-2050 only hide introns if exons are present! Remove...
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commitdiff
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diff to current
2016-04-11
gmungoc
JAL-2051 fetch Ensembl Gene accessions one at a time
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commitdiff
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diff to current
2016-04-11
gmungoc
JAL-1705 (new preference option to) hide introns when...
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commitdiff
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diff to current
2016-03-15
gmungoc
JAL-2016 FeatureSettingsI now FeatureSettingsModelI
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diff to current
2016-02-22
gmungoc
JAL-1705 first pass at applying preset feature colourin...
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commitdiff
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diff to current
2016-02-19
gmungoc
JAL-1705 more lenient test for 'sequence retrieved'
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diff to current
2016-02-12
gmungoc
JAL-1705 various refactoring towards Uniprot-to-Ensembl...
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2016-01-28
gmungoc
Merge branch 'develop' into JAL-1705_trialMerge
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2016-01-08
gmungoc
JAL-1705 DbSourceProxy properties converted to methods...
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diff to current
2016-01-05
gmungoc
Merge remote-tracking branch 'origin/features/JAL-1705_...
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2015-11-21
gmungoc
JAL-653 JAL-1968 FeaturesFile now handles Jalview or...
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-15
Jim Procter
Merge branch 'develop' into features/JAL-1705_ensembl
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commitdiff
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2015-10-15
tcofoegbu
JAL-1479 refactored SequenceI interface - changed getDB...
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commitdiff
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diff to current
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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commitdiff
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diff to current
2015-08-13
tcofoegbu
JAL-1826 bug fix to select pdb sequence fetcher via...
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diff to current
2015-06-28
Jim Procter
JAL-1705 refactored code for dbsource reggae validator...
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diff to current
2015-06-22
Jim Procter
JAL-1780 JAL-653 Format/AppletFormat import and export...
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commitdiff
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diff to current
2015-06-22
Jim Procter
JAL-653 JAL-1780 reorder imports
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commitdiff
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diff to current
2015-06-04
gmungoc
Clear status bar message when initialisation complete
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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commitdiff
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diff to current
2015-03-15
Charles Ofoegbu
JAL-1667 updated test and internationalization messages
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commitdiff
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diff to current
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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commitdiff
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diff to current
2015-03-04
Charles Ofoegbu
JAL-1668 First version JAL-1668
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commitdiff
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diff to current
2015-03-02
Charles Ofoegbu
house keeping
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commitdiff
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diff to current
2015-02-26
Charles Ofoegbu
JAL-1667 PDBe Search Interface implementation
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commitdiff
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diff to current
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
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diff to current
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-09-26
darolmar
JAL-1355
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2014-09-23
darolmar
JAL-1355
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