Merge branch 'JAL-3878_ws-overhaul-3' into with_ws_overhaul-3
[jalview.git] / src / jalview / gui / SequenceFetcher.java
2022-12-14 Jim ProcterMerge branch 'develop' into update_212_Dec_merge_with_2...
2022-11-21 Jim ProcterMerge commit 'alpha/update_2_12_for_2_11_2_series_merge...
2022-02-11 Jim ProcterJAL-3949 - refactor logging from jalview.bin.Cache...
2022-02-11 Ben SoaresJAL-3949 Complete new abstracted logging framework...
2021-09-29 Ben SoaresJAL-3885 Made the database JComboBox have StringPair...
2021-09-02 Jim ProcterMerge branch 'develop' into features/r2_11_2/JAL-3829_3...
2021-09-02 gmungocJAL-3509 JAL-1842 minor tidying of code
2021-08-30 Jim ProcterJAL-3829 3d-beacons has a custom alignment retrieval...
2021-04-06 Jim ProcterJAL-3832 dummy 3d-beacons database client and code...
2020-06-06 BobHansonJAL-3446 no actual changes; just using meaningful frame...
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider...
2020-02-06 gmungocJAL-3509 JAL-1842 minor tidying of code
2019-07-16 gmungocJAL-3144 better error message if no database selected
2019-01-30 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of
2019-01-30 gmungocJAL-3144 don't change comma to semi-colon if not requested!
2019-01-30 hansonrwoops.
2019-01-30 hansonrfixes unidentified Java problem
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
2019-01-21 hansonradded Platform settings separating mouse use of win...
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
2018-10-30 gmungocJAL-3144 left aligned looks better (and works in Jalvie...
2018-10-30 gmungocJAL-3144 close SequenceFetcher before opening PDB/Unipr...
2018-10-30 gmungocJAL-3144 spelling, Javadoc, abstract method for JalviewJS
2018-10-29 gmungocJAL-3144 SequenceFetcher without JDatabaseTree
2018-10-04 gmungocJAL-3132 set status message when over sequence id or...
2018-08-27 hansonrJAL-3026 alignmentFrame.statusBar.setText -> .setStatus
2018-06-27 hansonrJAL-3032 just the changes pulled already
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency...
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more !
2018-06-22 gmungocJAL-3032 avoid assignments on the same line as synchronized
2018-04-12 gmungocJAL-2944 tidies for review comments
2017-11-15 gmungocJAL-2835 spike updated with latest
2017-11-07 Jim ProcterJAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher...
2017-11-07 Jim ProcterJAL-2810 working back button shown for bulk ID retrieva...
2017-10-27 Jim ProcterJAL-2810 prototype retrieve ID tab for the Uniprot...
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-05-12 gmungocJAL-2480 efficient test for features present on sequence
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom...
2016-11-28 gmungocMerge branch 'develop' into trialMerge
2016-11-25 gmungocMerge branch 'develop' into trialMerge
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-08-30 Jim ProcterMerge branch 'develop' into merge/develop_bug/JAL-2154p... merge/develop_bug/JAL-2154projectMappings
2016-08-30 gmungocJAL-2183 simplified database tree actionPerformed,...
2016-08-30 gmungocJAL-2183 removed redundant (overriden) add panel to...
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum
2016-08-13 Jim ProcterJAL-2154 ignore all but the primary source resolved...
2016-08-13 Jim ProcterJAL-2154 make sure we wait for constructor thread to...
2016-08-11 Jim ProcterJAL-2154 jalview.gui.SequenceFetcher.fetchAndShow(db...
2016-08-11 Jim ProcterJAL-2154 JAL-1993 relocate show dbchooser action out...
2016-07-12 gmungocFileFormat enum wip changes
2016-06-21 Jim ProcterMerge branch 'features/JAL-2110_crossRefDuplications...
2016-06-16 gmungocJAL-1993 close sequence fetcher when opening database...
2016-06-16 gmungocJAL-1993 hide sequence fetcher dialogue until database...
2016-06-03 gmungocJAL-2110 random stuff
2016-05-26 gmungocJAL-1993 open sequence fetcher tree on 'fetch sequences'
2016-05-03 gmungocJAL-2050 hide introns also when fetching Ensembl xrefs...
2016-04-29 tcofoegbumerge
2016-04-29 gmungocJAL-2051 better checking of retrieved / duplicated...
2016-04-27 tcofoegbure-enabled new uniprot sequence fetcher on spike branch
2016-04-26 tcofoegbuJAL-1563 reverted to old uniprot fetcher to enable...
2016-04-22 tcofoegbuJAL-2071 further refactoring, optimisation, and house...
2016-04-19 tcofoegbuJAL-2071 architectural improvement for Plugable Free...
2016-04-12 gmungocJAL-2050 only hide introns if exons are present! Remove...
2016-04-11 gmungocJAL-2051 fetch Ensembl Gene accessions one at a time
2016-04-11 gmungocJAL-1705 (new preference option to) hide introns when...
2016-03-15 gmungocJAL-2016 FeatureSettingsI now FeatureSettingsModelI
2016-02-22 gmungocJAL-1705 first pass at applying preset feature colourin...
2016-02-19 gmungocJAL-1705 more lenient test for 'sequence retrieved'
2016-02-12 gmungocJAL-1705 various refactoring towards Uniprot-to-Ensembl...
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods...
2016-01-05 gmungocMerge remote-tracking branch 'origin/features/JAL-1705_...
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-15 Jim ProcterMerge branch 'develop' into features/JAL-1705_ensembl
2015-10-15 tcofoegbuJAL-1479 refactored SequenceI interface - changed getDB...
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-08-13 tcofoegbuJAL-1826 bug fix to select pdb sequence fetcher via...
2015-06-28 Jim ProcterJAL-1705 refactored code for dbsource reggae validator...
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export...
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports
2015-06-04 gmungocClear status bar message when initialisation complete
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-15 Charles OfoegbuJAL-1667 updated test and internationalization messages
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-04 Charles OfoegbuJAL-1668 First version JAL-1668
2015-03-02 Charles Ofoegbuhouse keeping
2015-02-26 Charles OfoegbuJAL-1667 PDBe Search Interface implementation
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-09-26 darolmarJAL-1355
2014-09-23 darolmarJAL-1355
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