JAL-1674 update both status bars when mousing over linked sequences
[jalview.git] / src / jalview / gui /
2015-02-20 gmungocJAL-1674 update both status bars when mousing over...
2015-02-19 gmungocJAL-845 applet colour by tree; translate as cDNA; pull...
2015-02-13 gmungocJAL-845 first rough applet SplitFrame (add parameter...
2015-02-12 gmungocJAL-1633 set file format on 'translate cDNA'
2015-02-12 gmungocMerge remote-tracking branch 'origin/merge/JAL-845_JAL...
2015-02-11 gmungocJAL-845 handling eXpand/Gather split frame views
2015-02-11 Jim ProcterJAL-1655 JAL-845 special support to set column width...
2015-02-11 Jim ProcterJAL-845 avoid OOBException when method is called with...
2015-02-11 Jim ProcterJAL-969 use AlignViewportI interface instance where...
2015-02-11 Jim ProcterJAL-1654 allow font to be specified without modifying...
2015-02-10 Jim Procternote about preserving/reinstating custom grid geometry...
2015-02-10 Jim ProcterJAL-1640 make font-size changes modify grid size again
2015-02-10 Jim ProcterJAL-845 - portability patch - workaround for lastToken...
2015-02-10 Jim ProcterJAL-845 @mungoc TODO comments - addAlignment needs...
2015-02-10 Jim ProcterJAL-966 @mungo TODO complete: List rather than bare...
2015-02-09 Jim ProcterMerge branch 'features/JAL-845splitPaneMergeDevelop...
2015-02-09 Jim ProcterMerge branch 'develop' into JAL-1640_stylesettings
2015-02-09 gmungocMerge remote-tracking branch 'origin/develop' into
2015-02-06 gmungocJAL-845 further code/tests/refactoring
2015-02-06 Jim ProcterJAL-1640 new menu allowing view settings to be transfer...
2015-02-06 Jim ProcterJAL-1640 Desktop.getAlignmentPanel and Desktop.getViewp...
2015-02-06 Jim ProcterJAL-1551 formatting
2015-02-06 Jim ProcterJAL-1640 more properties moved to style bean and ration...
2015-02-06 Jim ProcterJAL-1551 formatting
2015-02-06 Jim ProcterJAL-1640 JAL-966 is for boolean getter on AlignViewportI
2015-02-03 gmungocJAL-845 SplitFrame key bindings delegation to AlignFram...
2015-02-03 gmungocJAL-845 preparation for awareness of AlignFrame in...
2015-02-03 gmungocJAL-845 code/refactoring/tests related to linking DNA...
2015-02-02 Jim ProcterJAL-966 allow access to viewport interface from alignPanel
2015-02-02 Charles OfoegbuMerge commit
2015-02-02 Charles OfoegbuJAL-1644 revised Finder's implementation to use a flag...
2015-02-02 Jim ProcterJAL-1640 JAL-1551 formatting/imports/remove dead code
2015-02-02 Jim ProcterJAL-1640 updates to use get/setter on viewportI: effici...
2015-02-02 Jim ProcterJAL-1640 separated style operations into a new ViewStyl...
2015-01-30 gmungocJAL-845 linked protein/dna 'slave' further PoC function... features/JAL-845linkedProteinDnaEditing
2015-01-27 gmungocJAL-1588 new class renamed
2015-01-26 gmungocMerge branch 'features/JAL-1588saveChimeraSession'...
2015-01-26 gmungocJAL-1588 restoring saved Chimera session(s)
2015-01-23 gmungocJAL-1588 first working (?) restore of Chimera session...
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method
2015-01-23 Jim ProcterJAL-969 drop the hiddenColumns flag in favour of checki...
2015-01-23 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen...
2015-01-23 gmungocJAL-1635 show warning if less than 3 columns selected...
2015-01-23 Jim ProcterJAL-1551 JAL-962 formatting and code change ripples...
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour...
2015-01-22 Charles OfoegbuJAL-1553 added applet support for the select-column...
2015-01-22 gmungocJAL-1619 refactoring / tests to support 'align linked...
2015-01-21 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen...
2015-01-20 Charles OfoegbuFurther abstractions and clean up
2015-01-20 Charles Ofoegbubasic house keeping
2015-01-20 Charles OfoegbuJAL-1553 enhancement of column selection by annotation...
2015-01-19 gmungocJAL-1619 refactored cDNA translation; modified codon...
2015-01-19 gmungocJAL-1636 fix for mouseover of 'X' in translated protein
2015-01-18 Jim ProcterJAL-1372 i18n and tweaking set/unset representative...
2015-01-18 Jim ProcterJAL-1628 employ new AnnotationFile reader method to...
2015-01-18 Jim ProcterJAL-1628 method to hide insertions to current sequence...
2015-01-18 gmungocJAL-1619 refactoring wip
2015-01-16 gmungocJAL-1619 refactoring in progress for Dna translation
2015-01-14 gmungocJAL-1619 modified repaint after 'Align As' action
2015-01-14 Charles OfoegbuMerge branch 'features/JAL-1553_select-columns-by-annot...
2015-01-14 Charles OfoegbuModified AnnotationColumnChooser to maintain state... features/JAL-1553_select-columns-by-annotation
2015-01-13 Charles OfoegbuMerge branch 'features/JAL-1553_select-columns-by-annot...
2015-01-13 Charles OfoegbuRefactored AnnotationColumnChoser and AnnotationColorCh...
2015-01-12 gmungocJAL-1619 load/align cDNA for protein (wip)
2015-01-10 Charles OfoegbuJAL-1553 merge commit
2015-01-10 Charles OfoegbuJAL-1553 implementation of column selection by annotati...
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29...
2015-01-09 gmungocJAL-1588 check Chimera session file still exists
2015-01-08 gmungocJAL-1588 part work save/restore of Chimera session
2015-01-07 Jim ProcterMerge branch 'develop' into JAL-1483_29dev
2015-01-07 Jim ProcterJAL-1483 refactor NJTree constructor to allow preconfig...
2015-01-07 Jim ProcterJAL-1483 organise imports
2015-01-07 gmungocJAL-1551 formatting applied
2015-01-07 gmungocJAL-1588 refactoring to StructureViewerBase and related
2015-01-06 gmungocJAL-1588 refactoring prior to 'save Chimera project'
2015-01-04 gmungocJAL-1619 first draft of 'linked protein and cDNA'
2014-12-28 gmungocMerge branch 'features/JAL-1596ChimeraREST' into develop
2014-12-28 gmungocJAL-845 first working linked edit protein -> cDNA
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-09 gmungocJAL-1616 loading of datasets from XML patched
2014-12-09 gmungocJAL-1616 loading of datasets from XML patched Release_2_8_2_Branch
2014-12-08 Charles Ofoegbumerge commit
2014-12-08 Charles OfoegbuJAL-1613 hotfix for duplicated sequence after pairwise...
2014-12-08 Charles OfoegbuJAL-1613 hotfix for duplicated sequence after pairwise...
2014-12-05 Charles OfoegbuMerge branch 'features/JAL-1605_html-svg-export' into...
2014-12-05 Charles OfoegbuJAL-1605 added command line support for html export...
2014-12-05 Charles OfoegbuJAL-1605 merge commit
2014-12-05 Charles OfoegbuChange the Html export to utilize svg
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now...
2014-12-01 Jim ProcterMerge branch 'bug/JAL-1610refAnnotationsInViews' into...
2014-12-01 Jim ProcterMerge branch 'bug/JAL-1610refAnnotationsInViews' into...
2014-11-28 Jim ProcterMerge branch 'JAL-1517_release282' into develop
2014-11-28 gmungocJAL-1610 check reference annotations against alignment...
2014-11-28 Jim ProcterJAL-1517 formatting
2014-11-28 Jim ProcterJAL-1611 revise log level to reduce verbosity
2014-11-28 Jim ProcterJAL-1583 javadoc and fix constructor signature
2014-11-28 Jim ProcterJAL-1604 formatting
2014-11-28 Jim ProcterJAL-1604 revised wording and internationalised dialog
2014-11-28 Jim ProcterJAL-1583 refactored addInternalFrame to allow webservic...
2014-11-28 Jim ProcterJAL-1517 formatting/tidy
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