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JAL-1641 added support for persisting and retrieveing SequenceGroup
[jalview.git]
/
src
/
jalview
/
gui
/
2015-05-06
tcofoegbu
JAL-1641 added support for persisting and retrieveing...
tree
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commitdiff
2015-05-05
tcofoegbu
JAL-1641 Re-implemented lost changes after sequenceFeat...
tree
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commitdiff
2015-05-01
tcofoegbu
JAL-1700 Improved the error handling mechanism for...
tree
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commitdiff
2015-05-01
gmungoc
JAL-1690 refining 'copy format from' as applied to...
tree
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commitdiff
2015-04-30
Mungo Carstairs
JAL-845 reduced height to allow for Desktop decorators...
tree
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commitdiff
2015-04-30
tcofoegbu
Merge branch 'bug/JAL-1717_make-pbd-id-case_insensitive...
tree
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commitdiff
2015-04-30
tcofoegbu
JAL-1717 updated the PDBEntry model and updated the...
tree
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commitdiff
2015-04-29
gmungoc
JAL-1690 preserve scaling in New View, synch id width...
tree
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commitdiff
2015-04-28
gmungoc
JAL-1684 removed reflection from ViewStyle (to Junit...
tree
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commitdiff
2015-04-27
tcofoegbu
JAL-1715 implemented selection validation for the new...
tree
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commitdiff
2015-04-27
tcofoegbu
Merge branch 'features/JAL-1714_specify-mulitple-id_PDB...
tree
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commitdiff
2015-04-27
tcofoegbu
JAL-1714 improved the new PDB Sequence fetcher by enabl...
tree
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commitdiff
2015-04-27
gmungoc
Merge branch 'Release_2_8_3_Branch' of https://source...
tree
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commitdiff
2015-04-27
gmungoc
JAL-1691 more stable linked scrolling across split...
tree
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commitdiff
2015-04-24
tcofoegbu
Merge branch 'features/JAL-1711_PDB-specify-chain'...
tree
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commitdiff
2015-04-24
tcofoegbu
Merge branch 'Release_2_8_3_Branch' of https://source...
tree
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commitdiff
2015-04-24
tcofoegbu
JAL-1710, JAL-1711 Bug fix for exception thrown when...
tree
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commitdiff
2015-04-24
gmungoc
JAL-1691 prevent propagation of scrolling on mouseover...
tree
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commitdiff
2015-04-24
tcofoegbu
Merge branch 'bug/JAL-1707_retrieve-pdb-structure-for...
tree
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commitdiff
2015-04-24
tcofoegbu
JAL-1707 bug fix - also search using sequence name
tree
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commitdiff
2015-04-23
gmungoc
JAL-1702 corrected check for 'no colours selected'
tree
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commitdiff
2015-04-23
gmungoc
JAL-1706 distinguish between 'font too small' and ...
tree
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commitdiff
2015-04-23
gmungoc
JAL-1681 create mappings before AlignFrame to ensure...
tree
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commitdiff
2015-04-23
gmungoc
JAL-1706 fixed to correctly restore the last dialog...
tree
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commitdiff
2015-04-22
gmungoc
JAL-845 fix SplitFrame sizing on eXpand Views
tree
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commitdiff
2015-04-22
gmungoc
JAL-1690 fix NPE on Cancel when not in split frame
tree
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commitdiff
2015-04-17
tcofoegbu
JAL-1697 added ablity to select/view cached structures...
bug/JAL-1697_browse-local-structures
tree
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commitdiff
2015-04-17
tcofoegbu
JAL-1698 bug fix to enable addition of a single structu...
bug/JAL-1698_Append-Structures
tree
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commitdiff
2015-04-13
gmungoc
JAL-1690 show 'scale protein' in protein _and_ dna...
tree
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commitdiff
2015-04-13
gmungoc
JAL-1695 new property ENABLE_SPLIT_FRAME
tree
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commitdiff
2015-04-13
gmungoc
JAL-1695 parameter controls whether SplitFrame is enabled
tree
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commitdiff
2015-04-08
gmungoc
JAL-1270 protection against NullPointer when run as...
tree
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commitdiff
2015-04-08
gmungoc
JAL-1691 applet SplitFrame scrolling; pull up of 5...
tree
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commitdiff
2015-04-07
gmungoc
JAL-1691 linked scrollling in split frame (Desktop)
tree
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commitdiff
2015-04-02
gmungoc
JAL-1690 'scale protein as cDNA' options in Preferences...
tree
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commitdiff
2015-04-01
gmungoc
JAL-1264 reinstate Show annotations menu item
tree
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commitdiff
2015-03-30
gmungoc
JAL-1596 refactoring to allow unit tests to start and...
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-03-26
gmungoc
JAL-1688 compiler warnings removed
tree
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commitdiff
2015-03-25
tcofoegbu
JAL-1667 clean up commented codes in PopupMenu.java...
tree
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commitdiff
2015-03-25
tcofoegbu
JAL-1668 Tab for summary config, auto refresh after...
tree
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commitdiff
2015-03-18
Charles Ofoegbu
JAL-1668 added PDBDocFieldPreference for configuring...
tree
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commitdiff
2015-03-16
Charles Ofoegbu
JAL-1668 added validation for manual entry of pdb struc...
tree
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commitdiff
2015-03-15
Charles Ofoegbu
JAL-1667 updated test and internationalization messages
tree
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commitdiff
2015-03-09
Jim Procter
JAL-1565 loading a concise file causes insertions to...
tree
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commitdiff
2015-03-06
Charles Ofoegbu
JAL-1668 added filtering and sorting capabilites
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-03-06
Charles Ofoegbu
JAL-1667 refactoring to support JAL-1668
tree
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commitdiff
2015-03-04
Charles Ofoegbu
JAL-1668 First version JAL-1668
tree
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commitdiff
2015-03-02
Charles Ofoegbu
house keeping
tree
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commitdiff
2015-02-26
Charles Ofoegbu
JAL-1667 PDBe Search Interface implementation
tree
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commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
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commitdiff
2015-02-02
Charles Ofoegbu
Merge commit
tree
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commitdiff
2015-02-02
Charles Ofoegbu
JAL-1644 revised Finder's implementation to use a flag...
tree
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commitdiff
2015-01-27
gmungoc
JAL-1588 new class renamed
tree
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commitdiff
2015-01-26
gmungoc
Merge branch 'features/JAL-1588saveChimeraSession'...
tree
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commitdiff
2015-01-26
gmungoc
JAL-1588 restoring saved Chimera session(s)
tree
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commitdiff
2015-01-23
gmungoc
JAL-1588 first working (?) restore of Chimera session...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-969 hasHiddenRows is now an interface method
tree
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commitdiff
2015-01-23
Jim Procter
JAL-969 drop the hiddenColumns flag in favour of checki...
tree
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commitdiff
2015-01-23
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 JAL-962 formatting and code change ripples...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1628 drop getShowAnnotation accessor in favour...
tree
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commitdiff
2015-01-22
Charles Ofoegbu
JAL-1553 added applet support for the select-column...
tree
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commitdiff
2015-01-21
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
Further abstractions and clean up
tree
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commitdiff
2015-01-20
Charles Ofoegbu
basic house keeping
tree
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commitdiff
2015-01-20
Charles Ofoegbu
JAL-1553 enhancement of column selection by annotation...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1372 i18n and tweaking set/unset representative...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 employ new AnnotationFile reader method to...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 method to hide insertions to current sequence...
tree
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commitdiff
2015-01-14
Charles Ofoegbu
Merge branch 'features/JAL-1553_select-columns-by-annot...
tree
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commitdiff
2015-01-14
Charles Ofoegbu
Modified AnnotationColumnChooser to maintain state...
features/JAL-1553_select-columns-by-annotation
tree
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commitdiff
2015-01-13
Charles Ofoegbu
Merge branch 'features/JAL-1553_select-columns-by-annot...
tree
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commitdiff
2015-01-13
Charles Ofoegbu
Refactored AnnotationColumnChoser and AnnotationColorCh...
tree
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commitdiff
2015-01-10
Charles Ofoegbu
JAL-1553 merge commit
tree
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commitdiff
2015-01-10
Charles Ofoegbu
JAL-1553 implementation of column selection by annotati...
tree
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commitdiff
2015-01-09
Jim Procter
Merge branch 'JAL-1372_referenceseq' into feature_29...
tree
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commitdiff
2015-01-09
gmungoc
JAL-1588 check Chimera session file still exists
tree
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commitdiff
2015-01-08
gmungoc
JAL-1588 part work save/restore of Chimera session
tree
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commitdiff
2015-01-07
Jim Procter
Merge branch 'develop' into JAL-1483_29dev
tree
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commitdiff
2015-01-07
Jim Procter
JAL-1483 refactor NJTree constructor to allow preconfig...
tree
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commitdiff
2015-01-07
Jim Procter
JAL-1483 organise imports
tree
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commitdiff
2015-01-07
gmungoc
JAL-1551 formatting applied
tree
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commitdiff
2015-01-07
gmungoc
JAL-1588 refactoring to StructureViewerBase and related
tree
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commitdiff
2015-01-06
gmungoc
JAL-1588 refactoring prior to 'save Chimera project'
tree
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commitdiff
2014-12-28
gmungoc
Merge branch 'features/JAL-1596ChimeraREST' into develop
tree
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commitdiff
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
tree
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
tree
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commitdiff
2014-12-09
gmungoc
JAL-1616 loading of datasets from XML patched
tree
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commitdiff
2014-12-09
gmungoc
JAL-1616 loading of datasets from XML patched
Release_2_8_2_Branch
tree
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commitdiff
2014-12-08
Charles Ofoegbu
merge commit
tree
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commitdiff
2014-12-08
Charles Ofoegbu
JAL-1613 hotfix for duplicated sequence after pairwise...
tree
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commitdiff
2014-12-08
Charles Ofoegbu
JAL-1613 hotfix for duplicated sequence after pairwise...
tree
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commitdiff
2014-12-05
Charles Ofoegbu
Merge branch 'features/JAL-1605_html-svg-export' into...
tree
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commitdiff
2014-12-05
Charles Ofoegbu
JAL-1605 added command line support for html export...
tree
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commitdiff
2014-12-05
Charles Ofoegbu
JAL-1605 merge commit
tree
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commitdiff
2014-12-05
Charles Ofoegbu
Change the Html export to utilize svg
tree
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commitdiff
2014-12-05
gmungoc
JAL-1609 refactored colour by sequence command, now...
tree
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commitdiff
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