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Merge branch 'develop' into bug/JAL-4059_update_swingJS_for_JalviewJS_2_11_2_and_2_11_3
[jalview.git]
/
src
/
jalview
/
ws
/
jws2
/
2014-09-19
darolmar
JAL-1355
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commitdiff
2014-09-19
darolmar
JAL-1355
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commitdiff
2014-07-18
j.procter@dundee...
JAL-1379 new look JPred results
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commitdiff
2014-06-13
Jim Procter
Merge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
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commitdiff
2014-06-10
Jim Procter
JAL-1379 a JPred v3.0.1 client via JABA 2.1
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commitdiff
2014-06-10
Jim Procter
JAL-1379 allow services with an MSA interface to create...
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commitdiff
2014-06-10
Jim Procter
tidy source
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commitdiff
2014-06-10
Jim Procter
JAL-1379 refactor Jws2 service client so dynamic servic...
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commitdiff
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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commitdiff
2014-05-13
Jim Procter
JAL-1239 make doubly sure sub job status is set to...
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commitdiff
2014-04-27
Jim Procter
workaround for JAL-1319 - catch unexpected NPE thrown...
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commitdiff
2014-04-27
Jim Procter
JAL-1164 (regression) reinstate 'apply disorder predict...
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commitdiff
2014-04-21
Jim Procter
JAL-967 JAL-1482 new feature renderer api - needs more...
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commitdiff
2014-04-21
Jim Procter
patch for JAL-1465 - set min/max thresholds for each...
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commitdiff
2014-02-21
Jim Procter
patch for JAL-1449 - continuance of JAL-1364 - check...
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commitdiff
2014-02-03
Jim Procter
Merge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
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commitdiff
2014-02-03
Jim Procter
Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
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commitdiff
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
2013-12-25
darolmar
JAL-1355 (basic i18n support)
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commitdiff
2013-10-11
Jim Procter
Merge branch 'JAL-1164_disorderforselection' into Relea...
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commitdiff
2013-10-11
Jim Procter
JAL-1164 scope bySequence analysis methods to start...
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commitdiff
2013-10-11
Jim Procter
JAL-1164 only predict on currently selected sequences...
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commitdiff
2013-10-05
Jim Procter
JAL-1379 JAL-1378 exclusion list property to ignore...
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commitdiff
2013-10-05
Jim Procter
JAL-1378 hack to place 'Predictors' into Secondary...
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commitdiff
2013-10-05
Jim Procter
JAL-1364 use gapMap to map RNAalifold annotation onto...
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commitdiff
2013-10-05
Jim Procter
JAL-1379 JAL-1358 only enable/disable menu entries...
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commitdiff
2013-10-04
Jim Procter
JAL-1378 JWS-71 update to from-source build of JABA...
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commitdiff
2013-09-25
Jim Procter
JAL-1365 unified GUI building for AACon and RNAAliFold...
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commitdiff
2013-09-25
Jim Procter
JAL-1365 use AlignAnalysisUIText class to provide metad...
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commitdiff
2013-09-25
Jim Procter
JAL-1365 refactored core methods from RNAAliFold and...
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commitdiff
2013-09-20
Jim Procter
formatting
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commitdiff
2013-09-03
Jim Procter
Merge branch 'JAL-1373_precision' into RNAalifold
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commitdiff
2013-08-30
Daniel Barton
Colour be RNA helices bug fixed
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commitdiff
2013-08-30
Daniel Barton
JAL-1358 Cleaned up RNAalifoldClient.java. RNA helices...
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commitdiff
2013-08-28
Daniel Barton
RNAalifoldClient updated to be more like AAConClient...
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 jalview displays some RNA struture annotation...
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commitdiff
2013-08-27
Jim Procter
JAL-1359 simpler logic for deciding if all threads...
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 RNAStructExportImport test file mirrors Disord...
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 Just the eclipse project/classpath files so...
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commitdiff
2013-06-18
Jim Procter
JAL-1320 ascending alphabetical order
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commitdiff
2013-06-18
Jim Procter
JAL-1320 sort options and parameters according to their...
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commitdiff
2013-06-18
Jim Procter
typo
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commitdiff
2013-06-17
Jim Procter
JAL-1319 (blacklist fix) check for presence of a score...
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commitdiff
2013-05-24
Jim Procter
typo
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commitdiff
2012-12-11
jprocter
JAL-1217 check and avoid NPE if no datastore object...
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commitdiff
2012-12-11
jprocter
JAL-1217 report exception for service when no datastore...
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commitdiff
2012-11-08
jprocter
tidy imports
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commitdiff
2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
2012-10-03
jprocter
formatting
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commitdiff
2012-09-21
jprocter
JAL-849 try harder and wait for longer for JABAWS to...
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commitdiff
2012-09-21
jprocter
JAL-1171 refactor code to allow gui update for global...
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commitdiff
2012-09-21
jprocter
JAL-1165 visual delay whilst results are processed.
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commitdiff
2012-09-05
jprocter
formatting
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commitdiff
2012-09-05
jprocter
patch for NPE when no services are available to resolve...
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commitdiff
2012-09-05
jprocter
JAL-975 null any existing preset if user has supplied...
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commitdiff
2012-09-05
jprocter
JAL-976 fix AACon name typo in source and GUI
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commitdiff
2012-09-04
jprocter
off by one for sequence associated annotation
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commitdiff
2012-09-04
jprocter
unused variable
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commitdiff
2012-09-04
jprocter
JAL-974 JRonn thresholds
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commitdiff
2012-09-03
jprocter
JAL-975 JAL-974 JAL-976 always adjust height after...
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commitdiff
2012-09-03
jprocter
JAL-974 show thresholds for disorder predictor annotati...
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commitdiff
2012-08-31
jprocter
JAL-974 - ensure annotation created in local sequence...
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commitdiff
2012-08-29
jprocter
JAL-974 skip empty rows
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commitdiff
2012-08-29
jprocter
JAL-974 set GlobPlot raw/smooth score annotation rows...
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commitdiff
2012-08-29
jprocter
JAL-1153 new runtime property set to first non-null...
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commitdiff
2012-08-28
jprocter
remove contaminant imports
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commitdiff
2012-08-28
jprocter
JAL-676 JAL-1001 - simple menu item to access documenta...
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commitdiff
2012-08-28
jprocter
formatting
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commitdiff
2012-08-28
jprocter
formatting
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commitdiff
2012-08-28
jprocter
JAL-974 create mixture of sequence features marking...
tree
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commitdiff
2012-08-28
jprocter
JAL-974 refactored creation of Annotation rows from...
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commitdiff
2012-08-28
jprocter
JAL-974 JAL-975 try to cope with temporary server error...
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commitdiff
2012-08-28
jprocter
JAL-1001 - hack to extract the global URL for a service...
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commitdiff
2012-08-14
Anne Menard
last version stay many bugs ..
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commitdiff
2012-08-07
jprocter
JAL-1137 clean up old-style menu code and look
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commitdiff
2012-08-07
jprocter
JAL-1137 JAL-975 simpler menu for the AACon service...
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commitdiff
2012-08-07
jprocter
JAL-975 JAL-1137 debug messages for web service client...
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commitdiff
2012-08-03
jprocter
JAL-1136 allow parameter sets to be transferred across...
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commitdiff
2012-08-03
jprocter
JAL-1136 less code-dependent formula for creating serve...
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commitdiff
2012-08-03
jprocter
JAL-1136 - fix abstraction for parameter container...
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commitdiff
2012-08-02
jprocter
JAL-976 better logging/error reporting for disorder...
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commitdiff
2012-08-01
jprocter
JAL-976 don't clear menu out before adding jabaws servi...
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commitdiff
2012-07-08
jprocter
JAL-976 clean out associated annotation
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commitdiff
2012-07-08
jprocter
JAL-976 implement additional calcId method
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commitdiff
2012-07-08
jprocter
JAL-976 simpler parameter update model
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commitdiff
2012-07-08
jprocter
JAL-961 JAL-976 allow access to service URI for paramet...
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commitdiff
2012-07-08
jprocter
JAL-961 JAL-976 recover current settings from associate...
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commitdiff
2012-07-08
jprocter
JAL-976 pick an available instance of a service based...
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commitdiff
2012-07-08
jprocter
bugfix - use currently held parameters
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commitdiff
2012-07-08
jprocter
JAL-976 - storing service parameters on the view model
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commitdiff
2012-07-06
jprocter
JAL-976 test if the sliders have been modified from...
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commitdiff
2012-07-06
jprocter
unique URI for service type
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commitdiff
2012-07-06
jprocter
JAL-961 JAL-976 abstracted container for dynamic calcul...
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commitdiff
2012-07-05
Anne Menard
Add support RNAML format
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commitdiff
2012-07-03
jprocter
JAL-961 allow calcId to be specified independently...
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commitdiff
2012-07-02
jprocter
JAL-974 create graduated feature colours for annotation...
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commitdiff
2012-06-20
jprocter
formatting
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commitdiff
next