create method to test HMM model as string
[jalview.git] / test / jalview / datamodel / SequenceTest.java
2016-11-24 tcofoegbuJAL-2326 added setup method for JvOptionPane in all... features/JAL-2326_JOptionPane-refactoring
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 format tests
2016-10-03 gmungocJAL-2110 additional tests for setDatasetSequence, javad...
2016-09-28 Jim ProcterJAL-2210 JAL-2235 fix deriveSequence test for tightened...
2016-09-28 Jim ProcterJAL-2235 implicit test to check that exception is raise...
2016-09-16 gmungocJAL-2157 JAL-1803 refactored Sequence.updatePDBIds...
2016-09-05 gmungocJAL-2106 increased coverage for testGetPrimaryDbRefs
2016-09-04 Jim ProcterJAL-1803 JAL-2106 patch tests for tighter PDB Primary...
2016-08-25 Jim ProcterJAL-2106 tighten DBRefEntry primary seq test for PDB
2016-08-25 Jim ProcterMerge branch 'develop' into refactor/JAL-2106_sourceDbR...
2016-08-24 Jim ProcterJAL-2106 removed setSourceDBRef, refactor getSourceDBRe...
2016-08-24 Jim ProcterJAL-2106 rejig test to minimally verify patch that...
2016-08-23 gmungocJAL-2174 markColumns() refactored inside ColumnSelection
2016-07-04 gmungocJAL-2110 added another test case (should fail but doesn't)
2016-07-04 gmungocRevert "JAL-2110 use shared alignment dataset when...
2016-07-04 gmungocJAL-2110 use shared alignment dataset when copying...
2016-06-23 Jim ProcterJAL-2110 SequenceI.isProtein method
2016-05-31 gmungocJAL-2110 refactor + tests to allow a dbref version...
2016-05-17 tcofoegbuJAL-1270 Fixed anntatedPDBFileInputTest and updated...
2016-04-05 Jim ProcterJAL-2046 RFC about cyclic dataset sequence references...
2016-04-05 Jim ProcterJAL-2046 revise test for ambiguous case
2016-04-05 Jim ProcterJAL-2046 ambiguous test for addSequenceFeature when...
2016-04-05 Jim ProcterJAL-2046 RFC on addSequenceFeature behaviour after...
2016-04-05 Jim ProcterJAL-2046 test behaviour of copy constructor in differen...
2016-04-04 Jim ProcterJAL-2046 basic test to make sure any derived sequence...
2016-04-01 gmungocJAL-2046 fix for broken test for deriveSequence
2016-03-01 gmungocJAL-1705 align CDS and peptide products to transcripts
2016-02-04 gmungocJAL-1705 additional tests, validation regexp tweaks...
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge
2015-11-30 gmungocJAL-1270 constructor tests added, compiler warnings...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 licencing for new files in test and utils
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-07-23 tcofoegbuJAL-1805 modified test setup's so the are ran for group...
2015-07-08 gmungocJAL-1759 merge from develop
2015-07-07 tcofoegbuJAL-1805 test envirionment separation
2015-06-19 tcofoegbuJAL-1270 test suits import order refactor features/JAL-1270_JUnit-to-TestNG features/JAL-1782_JUnit-to-TestNG
2015-06-19 tcofoegbuJAL-1270 JUnit to TestNG refactoring
2015-05-12 gmungocJAL-1712 fixes/tests for Castor binding and 'show flank...
2015-03-27 tcofoegbumerge commit
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor
2015-01-18 Jim ProcterJAL-1628 new method to get a list of insertions in...
2015-01-18 Jim Procteralways use interface rather than field access
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-11-28 gmungocJAL-1610 check reference annotations against alignment...
2014-10-23 gmungocJAL-1264 new unit tests