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Merge branch 'features/mchmmer' into features/mchmmer_merge_JAL-1950
[jalview.git] / resources /
2018-05-30 gmungocJAL-3005 JAL-2629 file chooser argument for HMM search... tree | commitdiff
2018-05-28 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2018-05-25 gmungocJAL-2995 tooltip on fields with double-click to browse... tree | commitdiff
2018-05-10 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into... tree | commitdiff
2018-05-09 gmungocJAL-2714 HMMSearch cutoff by E-Value, Score or None tree | commitdiff
2018-05-08 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-04-20 gmungocJAL-2629 tweaks to text tree | commitdiff
2018-04-17 gmungocJAL-2629 choice of hmm profile now a parameter not... tree | commitdiff
2018-04-16 gmungocJAL-2937 use preferences for presets, simplify some... tree | commitdiff
2018-04-12 gmungocJAL-2944 tidies for review comments tree | commitdiff
2018-04-09 Mungo CarstairsJAL-2937 Cygwin path preference, method refactoring tree | commitdiff
2018-03-16 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-02-27 gmungocJAL-2717 JAL-2668 fixes to HMMER colour scheme display... tree | commitdiff
2018-02-26 Jim ProcterJAL-2920 parse variation and original elements of the... tree | commitdiff
2018-02-22 Jim ProcterJAL-984 remove all references to idwidth.gif and use... tree | commitdiff
2018-02-20 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-02-19 gmungocJAL-2629 refactoring of Hmmer preferences tree | commitdiff
2018-02-02 gmungocJAL-984 merged to spikes-mungo tree | commitdiff
2018-01-30 gmungocJAL-2069 menu item now "Variable colour..." to hint... tree | commitdiff
2018-01-30 gmungocJAL-1793 update spike build to latest incl stop and... tree | commitdiff
2018-01-26 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2018-01-18 gmungocJAL-2810 JAL-2886 i18n tree | commitdiff
2018-01-10 gmungocJAL-1793 update spike branch to latest tree | commitdiff
2018-01-09 gmungocJAL-2843 unit tests for Save/Load colours and filters... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present... tree | commitdiff
2017-11-23 gmungocJAL-2808 added conditions Present, NotPresent as options tree | commitdiff
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings) tree | commitdiff
2017-11-22 gmungocJAL-2808 JAL-2069 FeatureTypeSettings (with new Filters... tree | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest tree | commitdiff
2017-11-15 gmungocJAL-2069 dialog title now 'Variable colour' tree | commitdiff
2017-11-13 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-13 Jim ProcterJAL-2810 simpler tooltip (assume user will work out... tree | commitdiff
2017-11-08 gmungocJAL-2808 i18n, widget state settings tree | commitdiff
2017-11-07 Jim ProcterJAL-2810 i18n tab label tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike to latest (no value colour options) tree | commitdiff
2017-11-07 gmungocJAL-2069 choice of no / min / max colour if 'no attribu... tree | commitdiff
2017-11-07 Jim ProcterJAL-2804 clearer tooltip for autosearch checkbox tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike branch with latest tree | commitdiff
2017-11-07 gmungocJAL-2069 add 'by attribute' options to graduated featur... tree | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest tree | commitdiff
2017-11-02 gmungocJAL-2808 new Filters tab in Feature Settings tree | commitdiff
2017-10-31 gmungocJAL-2808 revised util.matcher package, 2 filter conditi... tree | commitdiff
2017-10-31 Jim ProcterJAL-2810 checkbox label for Autosearch tree | commitdiff
2017-10-30 gmungocJAL-2808 classes to support filtering by attribute... tree | commitdiff
2017-10-27 Jim ProcterJAL-2804 checkbox to enable/disable auto search (with... tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-09-28 gmungocJAL-2738 separate thread to load VCF; update FeatureSet... tree | commitdiff
2017-09-28 gmungocJAL-2744 simple Feature Details report from Popup menu tree | commitdiff
2017-09-25 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-09-25 gmungocJAL-2738 extract SNP variants from SNP or MIXED variant... tree | commitdiff
2017-09-21 gmungocJAL-2738 PoC of Load VCF file on to gene sequence tree | commitdiff
2017-09-19 kiramtJAL-2737 Checkstyle error fixes tree | commitdiff
2017-09-05 Jim ProcterMerge branch 'master' into portforward/JAL-2675_2102b1t... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2587' into documentation... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... tree | commitdiff
2017-08-31 kiramtJAL-2527 Fix typo tree | commitdiff
2017-08-31 kiramtJAL-2527 Updated Spanish, adjusted UI so Spanish fits tree | commitdiff
2017-08-30 kiramtJAL-2527 Added default setting/resetting and first... tree | commitdiff
2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up... tree | commitdiff
2017-08-28 tzvanaaltenJAL-2629 add option to set HMM Logo letter height to... tree | commitdiff
2017-08-28 kiramtJAL-2527 Started adding overview preferences tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 hmmbuild runs on the alignment by default tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 add multiple options for running hmmbuild... tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 add adjustable parameters to hmmbuild tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 hmmsearch no longer throws an error if no... tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 hmmsearch now works for different databases tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 add ability to add and select a DB for hmmsearch tree | commitdiff
2017-08-25 TZVanaaltenJAL-2629 add basic parameter adjustment to hmmsearch... tree | commitdiff
2017-08-18 TZVanaaltenMerge branch 'develop' into features/hmmer tree | commitdiff
2017-08-15 TZVanaaltenJAL-2629 add checks for executing hmmer commands as... tree | commitdiff
2017-08-15 TZVanaaltenJAL-2629 selected HMM name now shown in HMMER menu tree | commitdiff
2017-08-15 TZVanaaltenJAL-2629 the HMMER tab is now disabled when HMMER is... tree | commitdiff
2017-08-14 TZVanaaltenJAL-2629 add validation for HMMER path tree | commitdiff
2017-08-13 TZVanaaltenJAL-2629 add HMMER tab in preferences menu tree | commitdiff
2017-08-11 TZVanaaltenJAL-2629 add ability to select HMMs tree | commitdiff
2017-08-08 TZVanaaltenJAL-2629 add ability to select hmmer binaries folder tree | commitdiff
2017-08-08 kiramtJAL-2587 Added progress bar to overview. Not fully... tree | commitdiff
2017-08-07 TZVanaaltenJAL-2629 current hmmer commands are now executed in... tree | commitdiff
2017-08-04 TZVanaaltenJAL-2629 multiple HMMs can now be dropped onto an alignment tree | commitdiff
2017-07-31 TZVanaaltenJAL-2629 add hmmalign command tree | commitdiff
2017-07-27 TZVanaaltenJAL-2629 implement hmmbuild tree | commitdiff
2017-07-25 TZVanaaltenJAL-2629 add non-functional HMMER menu tree | commitdiff
2017-07-24 gmungocspike branch updated from latest features/JAL-2446 tree | commitdiff
2017-07-19 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-17 gmungocJAL-1648 JAL-2447 Spanish translations tree | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch tree | commitdiff
2017-06-02 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-25 Jim ProcterMerge branch 'develop' into features/JAL-1648_cache_use... tree | commitdiff
2017-05-24 gmungocJAL-2506 relocate Uniprot binding classes, bind to... tree | commitdiff
2017-05-22 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-19 gmungocJAL-2490 performant lookup of features for sorting tree | commitdiff
2017-05-17 Jim ProcterMerge branch 'bug/JAL-2510amendFeatures' into develop tree | commitdiff
2017-05-17 Jim ProcterMerge branch 'features/JAL-2447experimentalFlag' into... tree | commitdiff
2017-05-17 gmungocMerge branch 'develop' into bug/JAL-2510amendFeatures tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2435splitScreenFont' into... tree | commitdiff
2017-05-12 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into... tree | commitdiff
2017-05-09 gmungocJAL-1632 correct i18n and NPE tree | commitdiff
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