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[jalview.git] / src / jalview / gui / AlignmentPanel.java

2014-12-15	Jim Procter	JAL-1620 version bump and release notes	blob \| commitdiff
2014-11-27	Jim Procter	JAL-966 promote getName to an api method	blob \| commitdiff \| diff to current
2014-11-13	Jim Procter	Merge branch 'features/JAL-1469_svg-output-for-figure...	blob \| commitdiff \| diff to current
2014-11-12	Charles Ofoegbu	Added support for SVG Export	blob \| commitdiff \| diff to current
2014-10-31	gmungoc	JAL-1152 menu tweaks plus new option to put Autocalc...	blob \| commitdiff \| diff to current
2014-10-30	gmungoc	JAL-1152 with sticky annotation sort order that updates...	blob \| commitdiff \| diff to current
2014-09-23	darolmar	JAL-1355	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 source formatting	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 fix copyright for 2.8.2	blob \| commitdiff \| diff to current
2014-06-05	Jim Procter	JAL-1517 update copyright to version 2.8.2	blob \| commitdiff \| diff to current
2014-05-22	Jim Procter	JAL-1503 update version in GPL header	blob \| commitdiff \| diff to current
2014-04-04	Jim Procter	JAL-1211 - set annotation panel height according to...	blob \| commitdiff \| diff to current
2014-01-29	Jim Procter	JAL-1432 updated copyright notices	blob \| commitdiff \| diff to current
2013-06-13	Jim Procter	fix for JAL-1315	blob \| commitdiff \| diff to current
2013-05-24	Jim Procter	JAL-1291 reinstate fastPaint flag manipulation to make...	blob \| commitdiff \| diff to current
2013-05-24	Jim Procter	JAL-1161 only trigger an annotation repaint in unwrappe...	blob \| commitdiff \| diff to current
2013-05-24	Jim Procter	JAL-1161 enable fastPaint for nudges from scroll bars...	blob \| commitdiff \| diff to current
2012-11-08	jprocter	tidy imports	blob \| commitdiff \| diff to current
2012-10-22	jprocter	Jalview 2.8 Source Header	blob \| commitdiff \| diff to current
2012-10-03	jprocter	formatting	blob \| commitdiff \| diff to current
2012-09-24	jprocter	JAL-958 JAL-966 refactor group/alignment associated...	blob \| commitdiff \| diff to current
2012-09-06	jprocter	JAL-958 flag indicating if visualization settings for...	blob \| commitdiff \| diff to current
2012-07-02	jprocter	JAL-1129 progress bar - this patch doesn't provide...	blob \| commitdiff \| diff to current
2012-07-02	jprocter	JAL-968 incremental - PNG/EPS output has annotation...	blob \| commitdiff \| diff to current
2012-07-02	jprocter	tidy imports	blob \| commitdiff \| diff to current
2012-07-02	jprocter	JAL-974 - refactor FeatureRenderer constructor to Align...	blob \| commitdiff \| diff to current
2012-05-30	jprocter	JAL-1114 - refactor methods handling Vectors and Hashta...	blob \| commitdiff \| diff to current
2011-11-09	jprocter	Merge branch 'JAL-986_idwidthprefs' into JAL-976_jabaws...	blob \| commitdiff \| diff to current
2011-11-09	jprocter	Merge branch 'JAL-986_idwidthprefs' into develop	blob \| commitdiff \| diff to current
2011-11-09	jprocter	(JAL-986) rendering to imageMap counts as rendering...	blob \| commitdiff \| diff to current
2011-11-09	jprocter	Merge branch 'JAL-986_idwidthprefs' into develop	blob \| commitdiff \| diff to current
2011-11-09	jprocter	(JAL-985,JAL-986) allow different ID margin calculation...	blob \| commitdiff \| diff to current
2011-10-27	jprocter	(JAL-969) refactored alignmentViewport base class to...	blob \| commitdiff \| diff to current
2011-10-21	jprocter	extend alignPanel api with OOMHandler call to raise...	blob \| commitdiff \| diff to current
2011-10-21	jprocter	remove unnecessary import	blob \| commitdiff \| diff to current
2011-10-14	jprocter	(JAL-958) - normalised sequence logo for applet	blob \| commitdiff \| diff to current
2011-10-11	jprocter	normalised logo rendering (JAL-958)	blob \| commitdiff \| diff to current
2011-10-10	jprocter	update author list in license for (JAL-826)	blob \| commitdiff \| diff to current
2011-09-27	jprocter	apply version 2.7 copyright	blob \| commitdiff \| diff to current
2011-07-22	jprocter	ensure propagation of colour change on annotation updat...	blob \| commitdiff \| diff to current
2011-05-17	jprocter	refactor to allow distinct StructureSelectionManager...	blob \| commitdiff \| diff to current
2011-04-21	jprocter	separated alignment annotation height calculation from...	blob \| commitdiff \| diff to current
2011-04-08	jprocter	todo	blob \| commitdiff \| diff to current
2011-02-18	jprocter	new alignmentPanel api + JAL-777/JAL-641 debugging	blob \| commitdiff \| diff to current
2011-02-04	jprocter	javadoc	blob \| commitdiff \| diff to current
2011-01-21	jprocter	logic bug for auto scrolling	blob \| commitdiff \| diff to current
2011-01-18	jprocter	patch for JAL-695	blob \| commitdiff \| diff to current
2010-09-23	jprocter	apply jalview code style	blob \| commitdiff \| diff to current
2010-09-23	jprocter	Jalview 2.6 source licence	blob \| commitdiff \| diff to current
2010-06-11	jprocter	patched for JAL-531 - only display full symbol distribu...	blob \| commitdiff \| diff to current
2010-06-04	jprocter	update group annotation for new treegroups (JAL-552)	blob \| commitdiff \| diff to current
2010-06-01	jprocter	patches for # JAL-254 and JAL-548	blob \| commitdiff \| diff to current
2010-05-12	jprocter	debug comment	blob \| commitdiff \| diff to current
2010-04-30	jprocter	jalview 2.5 release banner	blob \| commitdiff \| diff to current
2010-04-14	jprocter	profile visualizations are now logos	blob \| commitdiff \| diff to current
2010-03-30	jprocter	group autoannotation and consensus display settings	blob \| commitdiff \| diff to current
2010-03-22	jprocter	ensure that all bits of annotation panel (slider, annot...	blob \| commitdiff \| diff to current
2009-08-21	jprocter	reversed order of addition of group consensus and conse...	blob \| commitdiff \| diff to current
2009-07-24	jprocter	annotation update method synchronises group annotation	blob \| commitdiff \| diff to current
2009-06-19	jprocter	smoother scroll-to-position action	blob \| commitdiff \| diff to current
2009-06-08	jprocter	ensure listeners are deregistered when panel is closed...	blob \| commitdiff \| diff to current
2009-02-24	jprocter	change method signature to allow caller to test if...	blob \| commitdiff \| diff to current
2008-11-12	jprocter	selection sending and receiving, autoscrolling to highl...	blob \| commitdiff \| diff to current
2008-09-04	jprocter	merge from 2_4_Release branch	blob \| commitdiff \| diff to current
2008-06-30	jprocter	javadoc and constraint to ensure annotation labels...	blob \| commitdiff \| diff to current
2007-10-31	jprocter	added bugfix todo	blob \| commitdiff \| diff to current
2007-05-07	amwaterhouse	Image size must allow for scale height	blob \| commitdiff \| diff to current
2007-04-18	amwaterhouse	checks for scrollbar height	blob \| commitdiff \| diff to current
2007-04-16	amwaterhouse	Too many calls to paintAlignment	blob \| commitdiff \| diff to current
2007-04-04	amwaterhouse	paintALignment	blob \| commitdiff \| diff to current
2007-04-02	amwaterhouse	Allow for scroll bar height	blob \| commitdiff \| diff to current
2007-04-02	amwaterhouse	Must allow for scrollbar height	blob \| commitdiff \| diff to current
2007-02-27	amwaterhouse	Use paintAlignment	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2007-02-02	amwaterhouse	22 = scrollbar and insets widthcvs diff gui/AlignmentPa...	blob \| commitdiff \| diff to current
2007-02-02	amwaterhouse	Must allow for scollbar and frame insets when getting...	blob \| commitdiff \| diff to current
2007-02-01	amwaterhouse	get fontmetrics from pg	blob \| commitdiff \| diff to current
2007-01-29	amwaterhouse	ID_ITALICS option in preferences	blob \| commitdiff \| diff to current
2007-01-23	amwaterhouse	Hidden representatives moved from sequence to viewport	blob \| commitdiff \| diff to current
2006-11-21	amwaterhouse	Right align print and images	blob \| commitdiff \| diff to current
2006-11-13	amwaterhouse	colours in viewport	blob \| commitdiff \| diff to current
2006-11-02	amwaterhouse	Update editMenuBar after alignment changed	blob \| commitdiff \| diff to current
2006-10-27	amwaterhouse	PaintRefresher can calculate seqs added or removed	blob \| commitdiff \| diff to current
2006-10-24	amwaterhouse	Must catch image outOfMemoryError	blob \| commitdiff \| diff to current
2006-10-05	amwaterhouse	Multiple Views	blob \| commitdiff \| diff to current
2006-09-12	amwaterhouse	Allow alt for group editing	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	Remove system.outs	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	get idWidth should use italic font when getting size	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	Remove system.out	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	getVisibleIdWidth() for making images	blob \| commitdiff \| diff to current
2006-08-29	amwaterhouse	Additional repaint	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	H key updates	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	Hold onto selected region when hiding all columns only	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	control and shift	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	Control and alt for toggle hide	blob \| commitdiff \| diff to current
2006-08-16	amwaterhouse	Fire alignment changed if seqs hidden / revealed	blob \| commitdiff \| diff to current
2006-08-15	amwaterhouse	H key to hide / reveal	blob \| commitdiff \| diff to current
2006-07-27	amwaterhouse	Remove immediate call to repaint when deleting	blob \| commitdiff \| diff to current
2006-07-19	amwaterhouse	Remove b keystroke	blob \| commitdiff \| diff to current
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