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JAL-3751 only merge strictly contiguous ranges of mappings
[jalview.git] / src / jalview / util / MapList.java
2020-10-22 gmungocJAL-3751 only merge strictly contiguous ranges of mappings blob | commitdiff
2019-06-11 gmungocJAL-3187 CDS has same dataset sequence as transcript blob | commitdiff | diff to current
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList blob | commitdiff | diff to current
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... blob | commitdiff | diff to current
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec... blob | commitdiff | diff to current
2017-12-01 gmungocJAL-2835 spike updated to latest (use specific SO term... blob | commitdiff | diff to current
2017-11-28 gmungocJAL-2850 MapList.isToForwardStrand added blob | commitdiff | diff to current
2017-10-05 gmungocJAL-2738 update spikes/mungo blob | commitdiff | diff to current
2017-10-05 gmungocJAL-2738 method to compound / traverse / convolve two... blob | commitdiff | diff to current
2017-10-03 gmungocJAL-2738 copy to spikes/mungo blob | commitdiff | diff to current
2017-08-16 Jim ProcterJAL-2418 source formatting blob | commitdiff | diff to current
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch blob | commitdiff | diff to current
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... blob | commitdiff | diff to current
2016-10-05 Jim ProcterJAL-2189 source formatting blob | commitdiff | diff to current
2016-08-09 Jim ProcterJAL-2154 test for CDS->protein map blob | commitdiff | diff to current
2016-08-04 Jim ProcterJAL-2154 test for CDS->protein map blob | commitdiff | diff to current
2016-06-14 gmungocJAL-1686 JAL-2110 equals and/or hashCode method added blob | commitdiff | diff to current
2016-06-09 gmungocJAL-2110 work in progress blob | commitdiff | diff to current
2016-04-01 gmungocJAL-1705 tweak to MapList.toString for debugging blob | commitdiff | diff to current
2016-03-11 gmungocJAL-1705 javadoc added only blob | commitdiff | diff to current
2016-03-01 gmungocJAL-1705 align CDS and peptide products to transcripts blob | commitdiff | diff to current
2016-01-28 gmungocJAL-1705 merge contiguous ranges when constructing... blob | commitdiff | diff to current
2016-01-21 gmungocJAL-1705 isFromForwardStrand added; toString (for debug... blob | commitdiff | diff to current
2015-12-22 gmungocJAL-653 AlignedCodonFrame internal refactor, merge... blob | commitdiff | diff to current
2015-11-30 gmungocJAL-653 MapList constructor merges any contiguous ranges blob | commitdiff | diff to current
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 blob | commitdiff | diff to current
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports blob | commitdiff | diff to current
2015-06-04 gmungoctoString method added to aid viewing in the debugger blob | commitdiff | diff to current
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch blob | commitdiff | diff to current
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... blob | commitdiff | diff to current
2014-12-15 Jim ProcterJAL-1620 version bump and release notes blob | commitdiff | diff to current
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 blob | commitdiff | diff to current
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 blob | commitdiff | diff to current
2014-05-22 Jim ProcterJAL-1503 update version in GPL header blob | commitdiff | diff to current
2014-01-29 Jim ProcterJAL-1432 updated copyright notices blob | commitdiff | diff to current
2012-10-22 jprocterJalview 2.8 Source Header blob | commitdiff | diff to current
2011-10-10 jprocterupdate author list in license for (JAL-826) blob | commitdiff | diff to current
2011-09-27 jprocterapply version 2.7 copyright blob | commitdiff | diff to current
2010-09-23 jprocterJalview 2.6 source licence blob | commitdiff | diff to current
2010-04-30 jprocterjalview 2.5 release banner blob | commitdiff | diff to current
2009-06-19 jprocternew coverage comparison - no test case in main method yet blob | commitdiff | diff to current
2009-06-08 jprocterapply gpl development license blob | commitdiff | diff to current
2008-09-04 jproctermerge from 2_4_Release branch blob | commitdiff | diff to current
2007-11-30 jprocterbugfixed MapList (must be propagated to vamsas version... blob | commitdiff | diff to current
2007-07-13 jprocterbugfix and comments blob | commitdiff | diff to current
2007-05-02 jprocterfixed getIntervals bug to ensure it returns range from... blob | commitdiff | diff to current
2007-04-25 jproctermoving word methods to MapList and begin bug-fix for... blob | commitdiff | diff to current
2007-04-17 jprocterproper copy constructor (not clone) blob | commitdiff | diff to current
2007-04-02 amwaterhouseaddElement blob | commitdiff | diff to current
2007-03-23 jprocterremoved Iterator usage. blob | commitdiff | diff to current
2007-03-19 jproctermapping implemented by MapList added to DBRefEntry. blob | commitdiff | diff to current
2007-02-07 amwaterhouseFormatting blob | commitdiff | diff to current
2007-01-25 jprocterchecks for irreflexive mapping in main tester blob | commitdiff | diff to current
2007-01-24 jprocterkkv change blob | commitdiff | diff to current
2007-01-24 jprocterMap arbitrary series of non-overlapping integer interva... blob | commitdiff | diff to current