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JAL-4046 JAL-3993 patch for 2.11.2.4 release
[jalview.git] / test /
2021-08-30 Jim ProcterJAL-3863 fix test and note about fragility tree | commitdiff
2021-08-30 Jim ProcterJAL-3863 mark first accession retrieved from Uniprot... tree | commitdiff
2021-08-30 Jim ProcterMerge branch 'feature/JAL-3855_ebi_alphafold_import... tree | commitdiff
2021-08-30 Jim ProcterJAL-3829 3d-beacons structure chooser logic (not yet... tree | commitdiff
2021-08-30 Jim ProcterJAL-3829 updated tests for 3db fetcher’s working FTS... tree | commitdiff
2021-08-30 Jim ProcterJAL-3829 fixed up the 3d-beacons data columns definitio... tree | commitdiff
2021-08-30 Jim ProcterJAL-3829 tidying up PDBFTSRestClient test responses... tree | commitdiff
2021-08-30 Jim ProcterJAL-3829 pushed the PDBFTSClient specific code to new... tree | commitdiff
2021-08-30 arngucciJAL-3829_spike minor changes tree | commitdiff
2021-08-30 arngucciJAL-3832 Gui working, with 3DBeacons parameters tree | commitdiff
2021-06-09 Jim ProcterJAL-3840 failing test - show that addGaps overflows tree | commitdiff
2021-06-09 Jim ProcterJAL-3840 failing test - show that addGaps overflows tree | commitdiff
2021-04-06 arngucciJAL-3829 more testing wit tdbeacons data columns and... arnaud/develop tree | commitdiff
2021-04-01 ArnaldoJAL-3829 attempt to fix my changes to follow the Jira... tree | commitdiff
2021-03-29 Arnaldofixed last commit tree | commitdiff
2021-03-29 ArnaldoRequest now parses the whole structures, need to fix... tree | commitdiff
2021-03-25 ArnaldoTDB.executeRequest fix & test passed tree | commitdiff
2021-03-25 ArnaldoAdded (and passed !)all the FTS tests from test.fts... tree | commitdiff
2021-03-25 ArnaldoCreated 3Dbeacons data_columns.txt Test passed for... tree | commitdiff
2021-03-15 Arnaldoadded untracked parsing attempts files tree | commitdiff
2021-03-15 ArnaldoAdding tests for 3DB, currently 2/4 corrects on PanelTest tree | commitdiff
2021-03-04 Jim ProcterRevert "Merge branch 'bug/JAL-3806_mappingCoversSequenc... tree | commitdiff
2021-02-18 gmungocJAL-3822 pass panel height and width to wrapped geometr... tree | commitdiff
2021-02-17 Jim ProcterMerge branch 'feature/JAL-3692enaEndpoint' into patch... tree | commitdiff
2021-02-05 gmungocJAL-2422 updated unit test for ChimeraX command change Develop-2_11_2_0-d20210205 tree | commitdiff
2021-02-04 gmungocJAL-3806 fix and test for one-to-many sequence mapping... bug/JAL-3806_mappingCoversCDS_reprise tree | commitdiff
2020-12-14 Ben SoaresJAL-3628 Test for doubly saved single backup file scheme tree | commitdiff
2020-12-14 Ben SoaresJAL-3280 Test for remote release build_properties file... tree | commitdiff
2020-12-04 Ben SoaresJAL-3775 added the Platform.isLinux() check for test... tree | commitdiff
2020-12-01 Ben SoaresJAL-3609 JAL-3775 Tests for jalview.bin.HiDPISetting tree | commitdiff
2020-10-29 Jim ProcterJAL-3759 fix compilation error for test tree | commitdiff
2020-10-29 Jim ProcterMerge branch 'patch/JAL-3700_JAL-3748_JAL-3763_for_2_11... tree | commitdiff
2020-10-29 gmungocJAL-3700 mapped sequence group includes short (or all... patch/JAL-3700_JAL-3748_JAL-3763_for_2_11_1_3 tree | commitdiff
2020-10-28 Jim ProcterJAL-3725 fix tests for EMBLFlatFile parser when mapping... tree | commitdiff
2020-10-28 gmungocJAL-3725 restrict mapped virtual feature location to... tree | commitdiff
2020-10-28 gmungocJAL-3725 helper methods for computing mapped feature... tree | commitdiff
2020-10-28 gmungocJAL-3725 exclude stop codon from CDS-to-protein mapping tree | commitdiff
2020-10-28 Jim ProcterJAL-3760 fix tests for changed behaviour tree | commitdiff
2020-10-28 Jim ProcterMerge branch 'bug/JAL-3760_protsTreatedAsNucleotides... tree | commitdiff
2020-10-28 Jim ProcterJAL-3765 fix test tree | commitdiff
2020-10-27 Jim ProcterJAL-3768 noticed failure of test when run as part of... tree | commitdiff
2020-10-22 gmungocJAL-3763 Javadoc, check for null, additional tests tree | commitdiff
2020-10-22 gmungocJAL-3751 only merge strictly contiguous ranges of mappings tree | commitdiff
2020-10-22 gmungocJAL-3763 test coverage for AlignedCodonFrame.markMapped... tree | commitdiff
2020-10-22 gmungocJAL-3700 JAL-3763 create datasets for test sequences tree | commitdiff
2020-10-22 gmungocJAL-3700 additions and corrections to unit tests tree | commitdiff
2020-10-22 gmungocJAL-3763 Javadoc, check for null, additional tests task/JAL-3763_newDatasetForCds tree | commitdiff
2020-10-22 gmungocJAL-3751 only merge strictly contiguous ranges of mappings tree | commitdiff
2020-10-22 gmungocJAL-3763 test coverage for AlignedCodonFrame.markMapped... tree | commitdiff
2020-10-20 Jim ProcterJAL-3765 fix test bug/JAL-3765_Find_bugs_in_21112 tree | commitdiff
2020-10-19 Jim ProcterJAL-3765 simple test that findAll finds all matches... tree | commitdiff
2020-10-08 gmungocJAL-3700 JAL-3763 create datasets for test sequences tree | commitdiff
2020-09-29 Jim ProcterJAL-3760 fix tests for changed behaviour bug/JAL-3760_protsTreatedAsNucleotides tree | commitdiff
2020-09-23 Ben SoaresMerge branch 'develop' into bug/JAL-3753_resources_dupl... tree | commitdiff
2020-09-23 Jim ProcterJAL-3748 maximal test for JAL-3748 using covid19 CDS... tree | commitdiff
2020-09-23 Ben SoaresJAL-3477 Added 10k leeway to amount of memory reserved... tree | commitdiff
2020-09-23 Jim ProcterJAL-3748 more tests verifying reconstruction of Alignem... tree | commitdiff
2020-09-23 Jim ProcterJAL-3748 reusable assert to trace specific issues with... tree | commitdiff
2020-09-22 Jim ProcterJAL-3748 simple test for SeqCigar preservation of start... tree | commitdiff
2020-09-22 Jim ProcterJAL-3748 additional asserts to verify start/end after... tree | commitdiff
2020-09-21 Jim ProcterMerge branch 'merge_review/JAL-3490_2_11_2_develop... tree | commitdiff
2020-09-17 gmungocJAL-3700 additions and corrections to unit tests bug/JAL-3700_mapSequenceSelection tree | commitdiff
2020-09-16 Jim ProcterJAL-3748 store an AlignmentView for the complement... tree | commitdiff
2020-09-14 Ben SoaresMerge branch 'feature/JAL-3615gzipXfam' into develop tree | commitdiff
2020-09-02 Ben SoaresJAL-3280 Test for remote release build_properties file... tree | commitdiff
2020-08-27 Ben SoaresMerge branch 'releases/Release_2_11_1_Branch' into... merge/JAL_1842+JAL-3509+releases_Release_2_11_1_Branch tree | commitdiff
2020-08-21 Jim ProcterJAL-3675 2.11.1.1 java 8 compatible patch for JAL-3615... tree | commitdiff
2020-08-21 Jim ProcterJAL-3615 code tidy, improve unit test tree | commitdiff
2020-08-18 gmungocJAL-2656 Java 8 compatible test for gzipped, refactored... tree | commitdiff
2020-08-18 gmungocJAL-3692 parse multiline CDS location correctly tree | commitdiff
2020-08-17 Jim ProcterMerge branch 'patch/JAL-3561_JAL-3660_fileformatexport_... tree | commitdiff
2020-08-17 Jim ProcterJAL-3490 merged with 2.11.2 develop tree | commitdiff
2020-08-17 Jim ProcterMerge branch 'patch/Release_2_11_1_Branch_patch_JAL... tree | commitdiff
2020-08-17 Jim ProcterMerge branch 'task/JAL-3597memoryLeakTest' into develop tree | commitdiff
2020-08-13 Ben SoaresJAL-3597 Increased heap passmark to <= 45MB and report... tree | commitdiff
2020-08-13 gmungocJAL-3597 slight tidying of code and Javadoc, passmark... tree | commitdiff
2020-08-13 gmungocJAL-3597 additional references nulled, bug in test... tree | commitdiff
2020-08-13 Ben SoaresJAL-3597 Increased heap passmark to <= 45MB and report... tree | commitdiff
2020-08-10 gmungocJAL-3490 match count independent of contiguous matches... patch/Release_2_11_1_Branch_patch_JAL-3490 tree | commitdiff
2020-08-05 Jim ProcterJAL-3628 init log after loading testProps for each... tree | commitdiff
2020-08-05 gmungocJAL-3692 unit test updated for ?gzip download endpoint URL patch/JAL-3692enaEndpointFlatfile tree | commitdiff
2020-08-05 gmungocJAL-3692 parse multiline feature qualifiers and escaped... tree | commitdiff
2020-08-05 gmungocJAL-3692 unit test updated for ?gzip download endpoint URL feature/JAL-3692enaEndpoint tree | commitdiff
2020-08-05 gmungocJAL-3692 parse multiline feature qualifiers and escaped... tree | commitdiff
2020-08-03 Jim ProcterJAL-3692 fix up test for 2.11.1 series datamodel API tree | commitdiff
2020-08-03 gmungocJAL-3692 set CDS /product as EMBLCDSPROTEIN description tree | commitdiff
2020-08-03 gmungocJAL-3692 refactor/complete parsing, more unit test... tree | commitdiff
2020-08-03 gmungocJAL-3692 parse DE for description, and other refactoring... tree | commitdiff
2020-08-03 gmungocJAL-3692 URL tests updated tree | commitdiff
2020-08-03 gmungocJAL-3692 unit test (J03321), fixes, dbrefs; todo: prote... tree | commitdiff
2020-08-03 gmungocJAL-3692 EMBL flatfile fetcher / parser (todo: CDS... tree | commitdiff
2020-07-31 Ben SoaresMerge branch 'releases/Release_2_11_1_Branch' into... tree | commitdiff
2020-07-28 Jim ProcterJAL-3615 update tests for Rfam/Pfam specific gzip endpoints tree | commitdiff
2020-07-28 Jim ProcterJAL-3615 update tests for Rfam/Pfam specific gzip endpoints tree | commitdiff
2020-07-27 gmungocJAL-2656 JAL-3615 check response headers to test for... tree | commitdiff
2020-07-27 gmungocJAL-3615 used gzip endpoints for Pfam and Rfam tree | commitdiff
2020-07-27 gmungocJAL-3692 set CDS /product as EMBLCDSPROTEIN description tree | commitdiff
2020-07-27 gmungocJAL-3692 refactor/complete parsing, more unit test... tree | commitdiff
2020-07-27 gmungocJAL-3621 corrected sequence feature sort and test tree | commitdiff
2020-07-24 gmungocJAL-3692 parse DE for description, and other refactoring... tree | commitdiff
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