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2020-08-03	gmungoc	JAL-3692 set CDS /product as EMBLCDSPROTEIN description	commit \| commitdiff \| tree
2020-08-03	gmungoc	JAL-3692 refactor/complete parsing, more unit test...	commit \| commitdiff \| tree
2020-08-03	gmungoc	JAL-3692 parse DE for description, and other refactoring...	commit \| commitdiff \| tree
2020-08-03	gmungoc	JAL-3692 URL tests updated	commit \| commitdiff \| tree
2020-08-03	gmungoc	JAL-3692 unit test (J03321), fixes, dbrefs; todo: protein...	commit \| commitdiff \| tree
2020-08-03	gmungoc	JAL-3692 EMBL flatfile fetcher / parser (todo: CDS...	commit \| commitdiff \| tree
2020-07-29	Jim Procter	Merge branch 'bug/JAL-2983negativeSliderMin' into releases...	commit \| commitdiff \| tree
2020-07-29	Jim Procter	JAL-3371 JAL-2983 don't modify 'extent' of slider ...	commit \| commitdiff \| tree
2020-07-29	Jim Procter	JAL-3675 mention -open argument in the command line...	commit \| commitdiff \| tree
2020-07-29	Jim Procter	JAL-3675 JAL-3570 JAL-3608 JAL-2983 release notes and...	commit \| commitdiff \| tree
2020-07-28	Jim Procter	JAL-3675 update release note for JAL-2656	commit \| commitdiff \| tree
2020-07-28	Jim Procter	JAL-2656 recognise non-HTTP URI input streams as gzipped...	commit \| commitdiff \| tree
2020-07-28	Jim Procter	JAL-2656 recognise Gzipped file input streams by their...	commit \| commitdiff \| tree
2020-07-28	Jim Procter	JAL-3615 update tests for Rfam/Pfam specific gzip endpoints	commit \| commitdiff \| tree
2020-07-27	Jim Procter	JAL-3675 release notes for JAL-3615 and JAL-2656	commit \| commitdiff \| tree
2020-07-27	gmungoc	JAL-2656 JAL-3615 check response headers to test for...	commit \| commitdiff \| tree
2020-07-27	gmungoc	JAL-3615 used gzip endpoints for Pfam and Rfam	commit \| commitdiff \| tree
2020-07-27	Jim Procter	Merge branch 'bug/JAL-2983negativeSliderMin' into releases...	commit \| commitdiff \| tree
2020-07-27	Jim Procter	JAL-3675 release notes for JAL-3621	commit \| commitdiff \| tree
2020-07-27	gmungoc	JAL-3621 corrected sequence feature sort and test	commit \| commitdiff \| tree
2020-07-27	gmungoc	JAL-3621 update to intervalstore v1.1	commit \| commitdiff \| tree
2020-07-27	Jim Procter	JAL-3675 release notes for JAL-3695 JAL-3696 JAL-3697	commit \| commitdiff \| tree
2020-07-27	Jim Procter	JAL-3697 show total number of features not shown	commit \| commitdiff \| tree
2020-07-27	Jim Procter	JAL-3696 log the error message from the exception to...	commit \| commitdiff \| tree
2020-07-27	Jim Procter	JAL-3695 htsjdk 2.12 -> 2.23 (library change only,...	commit \| commitdiff \| tree
2020-07-04	Jim Procter	Merge branch 'merge/JAL-3609_and_JAL-3608' into releases...	commit \| commitdiff \| tree
2020-07-04	Jim Procter	JAL-3675 version update and documentation for JAL-3493...	commit \| commitdiff \| tree
2020-07-04	Jim Procter	JAL-3638 JAL-3680 fix docs for Alt + Arrow LRUD in...	commit \| commitdiff \| tree
2020-07-04	Jim Procter	JAL-3638 don’t move cursor to next gap after moving...	commit \| commitdiff \| tree
2020-07-04	Jim Procter	JAL-3680 check whether a sequence selection exists...	commit \| commitdiff \| tree
2020-07-04	Jim Procter	JAL-3638 shift+arrow keys in cursor mode jumps cursor...	commit \| commitdiff \| tree
2020-06-29	Jim Procter	JAL-3675 2.11.1.1 release notes	commit \| commitdiff \| tree
2020-06-29	Jim Procter	Merge branch 'patch/Clear_Highlight_JAL-3493' into...	commit \| commitdiff \| tree
2020-06-29	Jim Procter	JAL-3493 clear search highlights when escape/deselect all	commit \| commitdiff \| tree
2020-06-29	Jim Procter	JAL-3493 failing test - creates a highlight and column...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3407 add GPL license to Jalview source files	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3407 release notes - JAL-247 - for auto-set-ID...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3407 fix JAL-3574 - remove from known issues for...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3574 JAL-3407 release notes	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'bug/JAL-3574filterByPOS' into documentation...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'documentation/JAL-3407_2.11.1_release...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3407 add and document ComputePeptideVariants.groovy	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'develop' of http://source.jalview.org...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3567 JAL-3407 document sequence features report...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	Merge branch 'bug/JAL-3567virtualFeatureCoordinates...	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-367 code tidy	commit \| commitdiff \| tree
2020-04-21	Jim Procter	JAL-3567 translated rather than imputed peptide	commit \| commitdiff \| tree
2020-04-14	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-14	Jim Procter	JAL-3407 JAL-3529 release notes	commit \| commitdiff \| tree
2020-04-14	Jim Procter	Merge branch 'bug/JAL-3529_uniprotidsinstockholm' into...	commit \| commitdiff \| tree
2020-04-14	Jim Procter	JAL-3529 revert ordering of DBRef addition so it reflects...	commit \| commitdiff \| tree
2020-04-14	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-14	Jim Procter	JAL-3597 improved Memory test suite by detecting base...	commit \| commitdiff \| tree
2020-04-14	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-14	Jim Procter	JAL-3407 release date set to 16th April, known issue...	commit \| commitdiff \| tree
2020-04-14	Jim Procter	Merge branch 'testing/JAL-3577_jalviewversion_autoset_fixed...	commit \| commitdiff \| tree
2020-04-09	Jim Procter	JAL-3577 automatically configure JALVIEW_VERSION for...	commit \| commitdiff \| tree
2020-04-06	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-06	Jim Procter	JAL-3407 redact java 8 incompatible type inference	commit \| commitdiff \| tree
2020-04-06	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-06	Jim Procter	JAL-3407 updated release date to Thursday 9th April...	commit \| commitdiff \| tree
2020-04-06	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-04-02	Jim Procter	Merge branch 'develop' into releases/Release_2_11_1_Branch	commit \| commitdiff \| tree
2020-03-31	Jim Procter	Merge branch 'documentation/Release_2_11_1_Branch'...	commit \| commitdiff \| tree
2020-03-31	Jim Procter	Merge branch 'documentation/Release_2_11_1_Branch'...	commit \| commitdiff \| tree
2020-03-31	Jim Procter	JAL-3407 basic doc for releasing jalview - will be...	commit \| commitdiff \| tree
2020-03-31	Jim Procter	Merge branch 'documentation/Release_2_11_1_Branch'...	commit \| commitdiff \| tree
2020-03-31	Jim Procter	JAL-3407 updated release date to 2nd April, and first...	commit \| commitdiff \| tree
2020-03-31	Jim Procter	Merge branch 'documentation/Release_2_11_1_Branch'...	commit \| commitdiff \| tree
2020-03-30	Jim Procter	JAL-3407 2.11.1.0 release date bump - maybe tomorrow...	commit \| commitdiff \| tree
2020-03-30	Jim Procter	JAL-3407 JAL-3130 back out java 9+ syntax that breaks...	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3562 exclude testNG groups from a build via -PtestngExcl...	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3407 JAL-3562 release notes	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3407 rejigging new features - simplify release...	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3407 reformat releases.html	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3407 JAL-3549 javadoc	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3407 - release notes for JAL-3547	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3549 javadoc	commit \| commitdiff \| tree
2020-03-16	Jim Procter	JAL-3407 JAL-3187 help documentation for virtual features...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	JAL-3407 JAL-3549 explicitly mention the ‘no features...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	JAL-3407 group together ‘virtual feature’ related features...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	Merge branch 'develop' of http://source.jalview.org...	commit \| commitdiff \| tree
2020-03-05	Jim Procter	Merge branch 'improvement/JAL-3543_dont_report_null_versions...	commit \| commitdiff \| tree
2020-03-03	Jim Procter	Merge branch 'groovy/JAL-3547_conservationsequenceexport...	commit \| commitdiff \| tree
2020-03-03	Jim Procter	JAL-3547 groovy script to get the conservation sequence...	commit \| commitdiff \| tree
2020-03-02	Jim Procter	JAL-3407 redact Java 8 incompatible '<>' with anonymous...	commit \| commitdiff \| tree
2020-02-27	Jim Procter	Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...	commit \| commitdiff \| tree
2020-02-27	Jim Procter	JAL-3407 release notes for JAL-3412	commit \| commitdiff \| tree
2020-02-27	Jim Procter	JAL-3412 patch for failing test	commit \| commitdiff \| tree
2020-02-27	Jim Procter	Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...	commit \| commitdiff \| tree
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