source.jalview.org Git - jalview.git/history - src/jalview/bin/Jalview.java

git://source.jalview.org / jalview.git / history

[jalview.git] / src / jalview / bin / Jalview.java

2011-04-08	jprocter	allow groovy scripts to be run when in headless mode...	blob \| commitdiff
2011-04-07	jprocter	allow groovy scripts to be run when in headless mode...	blob \| commitdiff \| diff to current
2011-04-07	jprocter	allow groovy scripts to be run when in headless mode...	blob \| commitdiff \| diff to current
2011-01-07	jprocter	refactored dropFile allowing known information to be...	blob \| commitdiff \| diff to current
2010-11-14	jprocter	refactored to decouple dependencies due to FileParse...	blob \| commitdiff \| diff to current
2010-11-14	jprocter	refactored protocol check to jalview.io.FileParse	blob \| commitdiff \| diff to current
2010-09-23	jprocter	apply jalview code style	blob \| commitdiff \| diff to current
2010-09-23	jprocter	Jalview 2.6 source licence	blob \| commitdiff \| diff to current
2010-08-31	jprocter	notes re JAL-629	blob \| commitdiff \| diff to current
2010-08-06	jprocter	interactive/batch mode test for groovy scripting (See...	blob \| commitdiff \| diff to current
2010-06-12	jprocter	documented the -colour command line argument.	blob \| commitdiff \| diff to current
2010-06-09	jprocter	OSX look and feel JAL-577	blob \| commitdiff \| diff to current
2010-05-14	jprocter	standard function for bootstrapping discovery threads	blob \| commitdiff \| diff to current
2010-04-30	jprocter	jalview 2.5 release banner	blob \| commitdiff \| diff to current
2010-02-10	jprocter	das feature fetch followed by png output fixed (bug...	blob \| commitdiff \| diff to current
2009-11-09	jprocter	more spin on GA prompt	blob \| commitdiff \| diff to current
2009-11-09	jprocter	user friendly GA and privacy statement	blob \| commitdiff \| diff to current
2009-10-13	jprocter	prompt user to enable usage stats	blob \| commitdiff \| diff to current
2009-07-24	jprocter	explicitly grab all permissions for application executi...	blob \| commitdiff \| diff to current
2009-06-12	jprocter	retrieve and init vamsas session from vdoc at URL	blob \| commitdiff \| diff to current
2009-06-08	jprocter	clargs documentation, new vamsas session import and...	blob \| commitdiff \| diff to current
2009-06-01	jprocter	first experiment with GA application use tracking	blob \| commitdiff \| diff to current
2009-03-17	jprocter	sortbytree/nosortbytree and defprop arguments. (defprop...	blob \| commitdiff \| diff to current
2008-12-04	jprocter	added local das sequence source CLI and documentation	blob \| commitdiff \| diff to current
2008-12-04	jprocter	allow sequence source to be specified as sequence:mydas...	blob \| commitdiff \| diff to current
2008-09-04	jprocter	merge from 2_4_Release branch	blob \| commitdiff \| diff to current
2008-06-30	jprocter	safer retrieval of groovy scripts from URLs	blob \| commitdiff \| diff to current
2008-01-29	jprocter	groovy scripts can be read from stdin	blob \| commitdiff \| diff to current
2008-01-11	jprocter	added groovy argument for launching a groovy script...	blob \| commitdiff \| diff to current
2007-11-12	jprocter	javadoc and introduction of dasserver and fetchdas...	blob \| commitdiff \| diff to current
2007-08-01	jprocter	added the '-tree' parameter to open a tree from the...	blob \| commitdiff \| diff to current
2007-07-30	jprocter	test cc change revoked.	blob \| commitdiff \| diff to current
2007-07-30	jprocter	test cc	blob \| commitdiff \| diff to current
2007-05-04	amwaterhouse	New example file for version 2.3	blob \| commitdiff \| diff to current
2007-05-04	amwaterhouse	New example file for version 2.3	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2007-02-06	jprocter	hardwired default user questionnaire url and by default...	blob \| commitdiff \| diff to current
2007-02-05	jprocter	command line hook for questionnaire url argument.	blob \| commitdiff \| diff to current
2007-02-02	amwaterhouse	LookandFeel must be set in headless state as window...	blob \| commitdiff \| diff to current
2006-11-06	amwaterhouse	Remember fileName in alignFrame	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	Error message if file not found moved for headless...	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-10	amwaterhouse	file: is a URL	blob \| commitdiff \| diff to current
2006-07-07	amwaterhouse	Colour argument added, to mirror applet view	blob \| commitdiff \| diff to current
2006-06-09	amwaterhouse	parseFeaturesFile	blob \| commitdiff \| diff to current
2006-05-11	amwaterhouse	Recently loaded files, urls, append sequences to Alignment	blob \| commitdiff \| diff to current
2006-04-04	amwaterhouse	Add annoations from the command line	blob \| commitdiff \| diff to current
2006-04-04	amwaterhouse	Jalview2XML does not use static load	blob \| commitdiff \| diff to current
2006-03-08	amwaterhouse	IdentifyFile should not be static	blob \| commitdiff \| diff to current
2006-01-12	jprocter	ensured properties are loaded before loggers are initia...	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	after merge	blob \| commitdiff \| diff to current
2005-10-07	amwaterhouse	Don't exit if file not found and not headless	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	blob \| commitdiff \| diff to current
2005-09-15	amwaterhouse	Logger moved to prefs so that class not found error...	blob \| commitdiff \| diff to current
2005-08-17	jprocter	<No Comment Entered>	blob \| commitdiff \| diff to current
2005-08-17	amwaterhouse	Use getDefault for exampleFile	blob \| commitdiff \| diff to current
2005-08-15	amwaterhouse	Output java version, os version on startup	blob \| commitdiff \| diff to current
2005-08-09	amwaterhouse	Properties file is used in preference to viewport/cache...	blob \| commitdiff \| diff to current
2005-08-03	amwaterhouse	Can run headless=true	blob \| commitdiff \| diff to current
2005-07-07	amwaterhouse	Runs if no files to open and -nodisplay is not used	blob \| commitdiff \| diff to current
2005-06-30	amwaterhouse	Formatting changes	blob \| commitdiff \| diff to current
2005-06-10	jprocter	added castor logger configuration.	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	Formatted source	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	GPL license added	blob \| commitdiff \| diff to current
2005-06-02	amwaterhouse	Check startup file is not null	blob \| commitdiff \| diff to current
2005-05-25	jprocter	tidied up system.out messages and moved many to stderr.	blob \| commitdiff \| diff to current
2005-05-20	amwaterhouse	look for startup file	blob \| commitdiff \| diff to current
2005-04-29	amwaterhouse	read in preferences at start up	blob \| commitdiff \| diff to current
2005-04-25	amwaterhouse	if applet, load properties in void init	blob \| commitdiff \| diff to current
2005-04-21	amwaterhouse	Allow for -open arg	blob \| commitdiff \| diff to current
2005-04-07	amwaterhouse	remove setdecorated line	blob \| commitdiff \| diff to current
2005-03-31	jprocter	added a an axis log4j appender property to the jalview...	blob \| commitdiff \| diff to current
2005-03-30	jprocter	fixed the log4j messages.	blob \| commitdiff \| diff to current
2005-03-21	amwaterhouse	use system l&f	blob \| commitdiff \| diff to current
2005-03-15	amwaterhouse	stick with cross platform look and feel!!!	blob \| commitdiff \| diff to current
2005-03-15	amwaterhouse	try system look and feel for a change	blob \| commitdiff \| diff to current
2005-02-07	amwaterhouse	load properties on startup	blob \| commitdiff \| diff to current
2005-01-25	amwaterhouse	system.exit or destroy if applet or app	blob \| commitdiff \| diff to current
2005-01-25	amwaterhouse	extends Applet	blob \| commitdiff \| diff to current
2004-12-10	amwaterhouse	Use cross platform lookandfeel	blob \| commitdiff \| diff to current
2004-11-16	amwaterhouse	don't use setdefaultlookandfeeldecorated, its buggy	blob \| commitdiff \| diff to current
2004-11-02	amwaterhouse	Jalview Imported Sources start	blob \| commitdiff \| diff to current

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