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JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
ext
/
2022-06-06
Ben Soares
JAL-4020 class reformatting
tree
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commitdiff
2022-06-06
Ben Soares
JAL-4020 Added search for PyMOLWinWithConsole.bat ...
tree
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commitdiff
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
tree
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commitdiff
2022-02-17
Jim Procter
JAL-3691 patch toUpper/toLower to use Locale.ROOT for...
tree
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commitdiff
2021-09-14
Ben Soares
JAL-2422 Also look in ~/Applications for ChimeraX on...
tree
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commitdiff
2021-09-14
Ben Soares
JAL-2422 Fixed URL encoding of REST calls (broken paths...
tree
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commitdiff
2021-09-13
Ben Soares
JAL-2422 Fixed URL encoding of REST calls (broken paths...
tree
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commitdiff
2021-09-13
Ben Soares
Merge branch 'develop' into feature/JAL-2422ChimeraX
tree
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commitdiff
2021-09-13
Ben Soares
JAL-2422 Added linux rpm and deb install locations...
tree
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commitdiff
2020-06-29
gmungoc
JAL-3674 more finessed asynchronous structure commands
tree
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commitdiff
2020-06-26
Jim Procter
JAL-3672 debug=false means no debug output
tree
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commitdiff
2020-06-23
gmungoc
JAL-3518 separation of ChimeraXManager, pull up of...
tree
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commitdiff
2020-05-21
gmungoc
JAL-2422 highlight ChimeraX selection (ChimeraX-1.0...
tree
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commitdiff
2020-05-11
gmungoc
JAL-2422 ChimeraX paths (versions up to 1.0) added...
tree
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commitdiff
2020-05-11
gmungoc
JAL-1333 additional Chimera versions for Windows instal...
tree
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commitdiff
2020-02-21
gmungoc
JAL-3518 more extraction of ChimeraX commands as overrides
tree
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commitdiff
2020-02-04
gmungoc
JAL-2422 remove temporary debug code
tree
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commitdiff
2020-02-04
gmungoc
JAL-2422 fixed stopProgressBar (broken in pull up refac...
tree
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commitdiff
2020-01-31
gmungoc
JAL-2422 temporary hacks removed; use hex colours for...
tree
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commitdiff
2020-01-28
gmungoc
JAL-2422 ChimeraX added to Preferences
tree
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commitdiff
2020-01-14
gmungoc
JAL-2422 proof of concept adaptations for ChimeraX...
tree
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commitdiff
2019-12-13
gmungoc
JAL-2422 basic proof of concept of ChimeraX opened...
tree
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commitdiff
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
tree
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commitdiff
2018-12-13
Ben Soares
JAL-3130 Fixing a few more tests that pass on a Mac...
tree
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commitdiff
2018-06-06
gmungoc
JAL-3013 ensure Chimera as a symlink gets resolved
tree
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commitdiff
2018-05-25
Jim Procter
JAL-2994 add a few future release points for good measu...
feature/JAL-2994chimeraPath
tree
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commitdiff
2018-05-25
gmungoc
JAL-2994 temporary patch with paths to Chimera for...
tree
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commitdiff
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
tree
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commitdiff
2017-10-18
Jim Procter
JAL-2782 remark about possible exception due to unsafe...
tree
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commitdiff
2016-12-02
gmungoc
Merge branch 'develop' into features/JAL-2295setChimera...
tree
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commitdiff
2016-11-30
Jim Procter
Merge branch 'features/JAL-2320_closeChimeraAction...
tree
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commitdiff
2016-11-29
gmungoc
Merge branch 'develop' into features/JAL-2295setChimera...
tree
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commitdiff
2016-11-24
Jim Procter
JAL-2325 applied BSD license for chimera/StrucViz2...
tree
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commitdiff
2016-11-14
gmungoc
JAL-2295 JAL-2296 skeleton 'attributes to features...
tree
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commitdiff
2016-11-10
gmungoc
JAL-2320 thread to close Chimera viewer panel if Chimer...
features/JAL-2320_closeChimeraAction
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-09-29
gmungoc
JAL-1903 increase REST reply timeout from 5 to 15 seconds
tree
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commitdiff
2016-05-26
gmungoc
JAL-2035 relocated a comment
tree
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commitdiff
2016-04-01
tcofoegbu
JAL-2048 Update to structureviz2 package from cytoscape
tree
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commitdiff
2016-03-31
tcofoegbu
JAL-2035 improvement to add binding to multiple model
tree
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commitdiff
2016-03-25
tcofoegbu
JAL-2035 improvement to bind Jalview to Chimera model...
tree
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-08-19
gmungoc
JAL-1742 suppress 'add chain' option for Jmol, pull...
tree
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commitdiff
2015-07-08
gmungoc
JAL-1759 merge from develop
tree
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commitdiff
2015-07-02
gmungoc
JAL-1677 check all response lines when parsing REST...
tree
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commitdiff
2015-06-05
gmungoc
JAL-1588 error dialog if Chimera project opened on...
tree
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commitdiff
2015-06-05
gmungoc
JAL-1622 Chimera command timeout increased to 5 secs...
tree
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commitdiff
2015-05-05
gmungoc
JAL-1725 first version of Jetty server / chimera select...
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-01-26
gmungoc
JAL-1588 restoring saved Chimera session(s)
tree
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commitdiff
2014-12-28
gmungoc
Merge branch 'features/JAL-1596ChimeraREST' into develop
tree
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commitdiff
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
tree
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
tree
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commitdiff
2014-12-03
gmungoc
JAL-1609 wip on Chimera colour by sequence
tree
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commitdiff
2014-11-28
gmungoc
JAL-1596 first REST interface coded
tree
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commitdiff
2014-11-27
gmungoc
JAL-1603 if Chimera selected in Preferences, warn if...
tree
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commitdiff
2014-11-17
gmungoc
JAL-1528 new Preference CHIMERA_PATH (Preferences ...
tree
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commitdiff
2014-11-17
gmungoc
JAL-1528 bug fixes and adjustments to Chimera interface
tree
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commitdiff
2014-11-13
gmungoc
JAL-1528 new Preference CHIMERA_PATH (Preferences ...
tree
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commitdiff
2014-11-12
gmungoc
JAL-1528 bug fixes and adjustments to Chimera interface
tree
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commitdiff
2014-09-23
darolmar
JAL-1355
tree
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commitdiff
2014-07-22
j.procter@dundee...
JAL-1333 more superposition debugging and deadlock...
tree
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commitdiff
2014-07-18
j.procter@dundee...
JAL-1333 more refinements - deadlocks still possible...
tree
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commitdiff
2014-07-04
j.procter@dundee...
JAL-1333 more abstraction and refactoring and working...
tree
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commitdiff
2014-07-02
Jim Procter
JAL-1333 Chimera specific code extracted from the...
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
tree
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commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
tree
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commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
tree
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commitdiff
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
tree
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commitdiff
2012-10-22
jprocter
Jalview 2.8 Source Header
tree
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commitdiff
2011-10-10
jprocter
update author list in license for (JAL-826)
tree
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commitdiff
2011-09-27
jprocter
apply version 2.7 copyright
tree
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commitdiff
2010-09-23
jprocter
apply jalview code style
tree
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commitdiff
2010-09-23
jprocter
Jalview 2.6 source licence
tree
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commitdiff
2010-04-30
jprocter
jalview 2.5 release banner
tree
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commitdiff
2009-06-08
jprocter
apply gpl development license
tree
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commitdiff
2008-09-04
jprocter
merge from 2_4_Release branch
tree
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commitdiff
2008-04-29
jprocter
added SeqSearch service interface. Documented and refac...
tree
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commitdiff
2007-02-07
amwaterhouse
Formatting
tree
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commitdiff
2006-08-21
amwaterhouse
header updated
tree
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commitdiff
2005-09-30
amwaterhouse
Remove redundancy in Eclipse
tree
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commitdiff
2005-08-22
jprocter
regenerated stubs from wsdl and removed old vamsas...
tree
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commitdiff
2005-08-22
jprocter
Replaced by jpred.java and associated stubs.
tree
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commitdiff
2005-08-22
jprocter
regenerated Jpred stubs and tidied client thread.
tree
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commitdiff
2005-08-17
jprocter
Simple Registry Service stubs
tree
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commitdiff
2005-06-08
amwaterhouse
Formatted source
tree
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commitdiff
2005-06-08
amwaterhouse
GPL license added
tree
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commitdiff
2005-05-22
jprocter
Added alignment ordering option to 'Sort by' and implem...
tree
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commitdiff
2005-04-28
jprocter
First try with MuscleWS
tree
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commitdiff
2005-04-08
jprocter
recent rebuild of the JPred client from WSDL2Java
tree
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commitdiff
2005-04-06
jprocter
New client code for JPred service includes return of...
tree
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commitdiff
2005-03-30
jprocter
cleaned up some comments and exception messages.
tree
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commitdiff
2005-03-18
jprocter
rough JPredService client copied from WebServices project.
tree
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commitdiff
2005-01-15
jprocter
Jemboss(emboss 2.9.0) classes to provide client functio...
tree
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commitdiff