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Merge branch 'develop' into features/JAL-2110_makeSenseOfCrossRef
[jalview.git]
/
src
/
jalview
/
analysis
/
CrossRef.java
2016-06-03
gmungoc
JAL-2110 random stuff
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2016-05-20
gmungoc
JAL-2110 unit tests for and minor refactoring of CrossRef
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2016-04-29
gmungoc
JAL-2051 better checking of retrieved / duplicated...
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2016-04-01
gmungoc
JAL-1705 reworked AlignmentUtils.makeCdsAlignment and...
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2016-03-21
gmungoc
JAL-2029 further fixes to get correct xrefs and xrefs...
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2016-03-21
gmungoc
JAL-2029 many-to-many EnsemblCDS-to-Uniprot mappings
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2016-03-11
gmungoc
JAL-1705 refactoring etc for fetching Ensembl --> Uniprot
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2016-02-19
gmungoc
JAL-1705 refactor show products, set initial split...
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2016-02-12
gmungoc
JAL-1705 various refactoring towards Uniprot-to-Ensembl...
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2016-01-28
gmungoc
Merge branch 'develop' into JAL-1705_trialMerge
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2016-01-27
gmungoc
JAL-1705 add exon name to features and render on peptid...
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2016-01-23
gmungoc
JAL-1705 compute peptide variants from dna; add "conseq...
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2016-01-21
gmungoc
JAL-1705 get xrefs only for dna/peptide; code tidy
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2015-11-30
gmungoc
JAL-1421 generics loop syntax; 'bug?' comment added
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2015-10-15
tcofoegbu
JAL-1479 refactored SequenceI interface - changed getDB...
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2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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diff to current
2015-04-13
gmungoc
JAL-1693 make exon alignment for get-xref splitframe...
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2015-03-30
gmungoc
JAL-1264 remove broken applet build dependencies
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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diff to current
2012-10-22
jprocter
Jalview 2.8 Source Header
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2012-10-03
jprocter
formatting
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2012-06-13
jprocter
javatidy
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2012-06-12
jprocter
JAL-1115 refactor base collection for Alignment from...
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-09-27
jprocter
apply version 2.7 copyright
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2010-09-23
jprocter
apply jalview code style
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2010-09-23
jprocter
Jalview 2.6 source licence
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2010-04-30
jprocter
jalview 2.5 release banner
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2009-06-19
jprocter
debug
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2009-06-08
jprocter
apply gpl development license
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2009-02-06
jprocter
fix occasional nullpointer ref when seq ID retrieval...
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2008-09-04
jprocter
merge from 2_4_Release branch
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2008-08-19
jprocter
better check for molecule type when identifying interna...
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2008-08-06
jprocter
extra checks for datasetsequence for when getDbRefs...
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2007-11-16
jprocter
refactor abstract sequence fetching and DBSource machin...
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2007-11-12
jprocter
crossrefs have properly updated pdbId lists
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2007-09-07
jprocter
formatting and ensure that dataset is actually searched...
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2007-08-01
jprocter
null pointer exception bug fix
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2007-07-25
jprocter
fix crossRef retrieval so either protein OR nucleotide
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2007-07-13
jprocter
methods for traversing database reference space
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diff to current