Merge branch 'develop' into bug/JAL-1841rnaSecStr
[jalview.git] / src / jalview / analysis / SequenceIdMatcher.java
2016-06-09 gmungocJAL-2110 work in progress
2016-06-01 Jim ProcterJAL-2038 ensure bare Strings are lowercased before...
2016-05-30 tcofoegbuJAL-2038 fix to enable case-insensitive file name ...
2016-03-21 gmungocJAL-2029 many-to-many EnsemblCDS-to-Uniprot mappings
2016-03-11 gmungocMerge branch 'develop' into features/JAL-653_JAL-1766_h...
2016-03-11 gmungocJAL-1270 unit test for SequenceIdMatcher.SeqIdName
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge
2015-11-30 gmungocJAL-652 refactored to remove one method
2015-10-15 tcofoegbuJAL-1479 refactored SequenceI interface - changed getDB...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-06-05 Jim ProcterJAL-1115 JAL-653 partial introduction of List interface...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-06-13 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-04-21 Jim ProcterJAL-1427 make sure we are working with dataset sequence...
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-07-21 jprocterretrieve all sequences matching a particular name ...
2011-07-09 jproctertodo re JAL-732
2011-01-17 jproctereliminate utf8 compilation errors
2011-01-07 jprocterrefactored to use SequenceI
2010-09-23 jprocterJalview 2.6 source licence
2010-04-30 jprocterjalview 2.5 release banner
2009-06-08 jprocterapply gpl development license
2009-06-01 jprocterlook in database references for more ID strings to...
2008-09-04 jproctermerge from 2_4_Release branch
2007-02-07 amwaterhouseFormatting
2006-10-10 jprocterrefined id matching to pick the closest match (by lengt...
2006-08-21 amwaterhouseheader updated
2005-08-22 jproctercomment on WORD_SEP values
2005-08-17 jprocterFixed basic name to sequence ID matching (bug dragonfly...
2005-08-12 jprocterfixed leafMapping bug for Id's like SequenceX (where...
2005-06-30 amwaterhouseFormatting changes
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-06-02 jprocterminor changes to try and make jalopy happy
2005-05-05 jprocterMoved tree leafname to alignment set matching into...