Merge branch 'develop' into features/JAL-1793VCF
[jalview.git] / src / jalview / api / AlignViewportI.java
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into...
2017-10-11 kiramtJAL-2742 removed unused getViewAsCigars
2017-09-14 gmungocJAL-2727 null more fields in AlignmentViewport.dispose...
2017-03-31 gmungocJAL-2435 slightly more sensible behaviour changing...
2017-03-30 gmungocMerge branch 'develop' into features/JAL-2435splitScree...
2017-03-21 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into...
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code
2017-03-16 kiramtJAL-2388 Renamed viewport position props to viewport...
2017-03-08 gmungocJAL-2435 copy font changes across split screen
2017-03-01 gmungocMerge branch 'features/JAL-2295setChimeraAttributes...
2017-02-28 kiramtJAL-2388 First move of endRes etc out of AlignmentViewp...
2017-02-09 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-02-09 kiramtJAL-2388 Initial refactor of OverviewPanel
2017-01-31 gmungocJAL-2371 rename global/viewportColourScheme to residueS...
2017-01-31 gmungocJAL-2385 more tests/bug fixes mostly for gui.SliderPane...
2017-01-27 gmungocJAL-2371 CollectionColourScheme renamed ResidueShader...
2017-01-04 gmungocJAL-2371 CollectionColourScheme wraps ColourSchemeI
2016-12-01 Jim ProcterJAL-1933 basic hack to get gap counts shown as an annot...
2016-11-22 Jim ProcterMerge branch 'features/JAL-1738_JAL-345_selectionfromhi...
2016-11-17 gmungocJAL-98 ProfilesI container for profiles for columns
2016-11-02 gmungocJAL-98 ProfileI interface for Profile
2016-11-02 gmungocJAL-98 Profile and ResidueCount moved from analysis...
2016-10-28 Jim ProcterJAL-966 SearchResultsI now on viewmodels.AlignmentViewp...
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 gmungocMerge branch 'develop' into bug/JAL-98consensusMemory
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-10-03 gmungocJAL-98 use Profile to store consensus, ResidueCount...
2016-09-22 gmungocJAL-2216 new dispose() method to null references
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection...
2016-08-31 Jim ProcterJAL-2034 moved ‘isDefinedGroup’ flag to a test method...
2016-06-02 tcofoegbuJAL-1944 java doc update and minor house keeping
2016-06-01 tcofoegbuJAL-1944 updated bugfix implementation
2016-05-31 tcofoegbuJAL-1944 fix for visible seqs sometimes been replaced...
2016-03-23 tcofoegbuJAL-2009 added programmatic custom feature setting...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference...
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile
2015-06-10 tcofoegbuJAL-1641 updated applet version
2015-05-19 tcofoegbuJAL-1641 Further refactoring of JSON export option...
2015-04-28 gmungocJAL-1684 removed reflection from ViewStyle (to Junit...
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method
2015-01-23 Jim ProcterJAL-969 javadoc and mark interface overrides for clarity
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour...
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29...
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc
2014-09-12 j.procter@dundee... JAL-1486 JAL-535 refactor code for trimming alignment...
2014-08-08 j.procter@dundee... JAL-1483 move show sequence feature and sequence featur...
2014-08-08 j.procter@dundee... JAL-1483 model and api for feature display list on...
2014-06-06 Jim ProcterJAL-1517 source formatting
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-05-02 Jim ProcterMerge branch 'Release_2_8_1_Branch' into JAL-1372_refer...
2014-05-01 Jim ProcterJAL-961 store result of conservation analysis worker...
2014-02-17 Jim ProcterJAL-1445 expose columnSelection setter.
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-10-11 Jim ProcterJAL-1385 expose core view model methods in interface
2013-10-07 Jim ProcterJAL-1385 JAL-535 refactor sequence colour settings...
2013-10-07 Jim ProcterJAL-1385 expose core view model methods in interface
2013-08-30 Jim ProcterJAL-1370 JAL-1371 flags for display and colour of view...
2012-11-08 jproctertidy imports
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated...
2012-08-29 jprocterJAL-1155 fix panel length calculation for grouped graph...
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta...
2011-10-28 jprocterextend API
2011-10-27 jprocter(JAL-961) more calculation annotation and result object...
2011-10-21 jprocterRefactored alignment viewport to use common base, exten...
2011-10-18 jprocterbackout parts of the interface from another development...
2011-10-18 jprocter(Jalview 3) refactored Graphics2D annotation rendering...