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[jalview.git] / src / jalview / api /
2015-08-11 tcofoegbuadd ability to launch jalview from exported html +... tree | commitdiff
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring tree | commitdiff
2015-06-26 tcofoegbuJAL-1780 improvement to ensure export settings dialog... tree | commitdiff
2015-06-18 Jim ProcterJAL-653 JAL-1780 javadoc for FeatureRenderer prior... tree | commitdiff
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference... tree | commitdiff
2015-06-17 Jim ProcterMerge branch 'features/JAL-653_gffalignments' into... tree | commitdiff
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments tree | commitdiff
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile tree | commitdiff
2015-06-17 tcofoegbuJAL-1780 Export settings for flatfile output tree | commitdiff
2015-06-15 tcofoegbuJAL-1641 clean up tree | commitdiff
2015-06-15 tcofoegbuJAL-1641 docs for ComplexAlignFile interface tree | commitdiff
2015-06-12 tcofoegbuJAL-1641 refactor tree | commitdiff
2015-06-10 tcofoegbuJAL-1641 updated applet version tree | commitdiff
2015-06-05 tcofoegbuJAL-1760 JAL-1641 Serialisation of Hidden Seqs and... tree | commitdiff
2015-06-05 Jim ProcterJAL-1482 JAL-653 refactor feature file import code... tree | commitdiff
2015-06-05 Jim ProcterJAL-1482 refactor setTableData to more sensible name... tree | commitdiff
2015-06-01 tcofoegbuJAL-1641 remove all refs/imports from gui package tree | commitdiff
2015-05-19 tcofoegbuJAL-1641 Further refactoring of JSON export option... tree | commitdiff
2015-04-28 gmungocJAL-1684 removed reflection from ViewStyle (to Junit... tree | commitdiff
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5... tree | commitdiff
2015-04-02 gmungocJAL-1690 'scale protein as cDNA' options in Preferences... tree | commitdiff
2015-03-30 gmungocJAL-1596 refactoring to allow unit tests to start and... tree | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... tree | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... tree | commitdiff
2015-01-26 gmungocMerge branch 'features/JAL-1588saveChimeraSession'... tree | commitdiff
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method tree | commitdiff
2015-01-23 Jim ProcterJAL-969 javadoc and mark interface overrides for clarity tree | commitdiff
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour... tree | commitdiff
2015-01-20 Charles Ofoegbuclean up tree | commitdiff
2015-01-20 Charles Ofoegbuclean up tree | commitdiff
2015-01-20 Charles Ofoegbubasic house keeping tree | commitdiff
2015-01-13 Charles OfoegbuMerge branch 'features/JAL-1553_select-columns-by-annot... tree | commitdiff
2015-01-13 Charles OfoegbuRefactored AnnotationColumnChoser and AnnotationColorCh... tree | commitdiff
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29... tree | commitdiff
2015-01-07 Jim ProcterMerge branch 'develop' into JAL-1483_29dev tree | commitdiff
2015-01-06 gmungocJAL-1588 refactoring prior to 'save Chimera project' tree | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 tree | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes tree | commitdiff
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now... tree | commitdiff
2014-11-27 Jim ProcterJAL-966 promote getName to an api method tree | commitdiff
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc tree | commitdiff
2014-09-12 j.procter@dundee... JAL-1486 JAL-535 refactor code for trimming alignment... tree | commitdiff
2014-09-12 j.procter@dundee... JAL-535 tidy interface definition and documentation tree | commitdiff
2014-08-08 j.procter@dundee... formatting/typo tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 move show sequence feature and sequence featur... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 sort by feature score/density made first class... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 JAL-1104 method to pass operations for undo... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 abstract feature renderer model holds render... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 model and api for feature display list on... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1482 nascent feature settings model and controller... tree | commitdiff
2014-07-04 j.procter@dundee... JAL-1333 more abstraction and refactoring and working... tree | commitdiff
2014-07-02 Jim Procterformatting tree | commitdiff
2014-07-02 Jim ProcterJAL-1333 JAL-1527 refactors to create core structure... tree | commitdiff
2014-06-13 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-1483_featu... tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 tree | commitdiff
2014-05-23 Jim ProcterJAL-1445 extend functionality to select or toggle selec... tree | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header tree | commitdiff
2014-05-02 Jim ProcterMerge branch 'Release_2_8_1_Branch' into JAL-1372_refer... tree | commitdiff
2014-05-01 Jim ProcterJAL-961 store result of conservation analysis worker... tree | commitdiff
2014-04-21 Jim ProcterJAL-1483 interface to allow score model to be parameter... tree | commitdiff
2014-04-21 Jim ProcterJAL-967 JAL-1482 new feature renderer api - needs more... tree | commitdiff
2014-04-21 Jim ProcterJAL-1473 refactor score matrices and tree score calcula... tree | commitdiff
2014-02-17 Jim ProcterJAL-1445 ported routine for selecting containing/non... tree | commitdiff
2014-02-17 Jim ProcterJAL-1445 expose columnSelection setter. tree | commitdiff
2014-02-17 Jim ProcterJAL-535 interface for GUI state update methods that... tree | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge tree | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices tree | commitdiff
2013-10-11 Jim ProcterJAL-1385 expose core view model methods in interface tree | commitdiff
2013-10-07 Jim ProcterJAL-1385 JAL-535 refactor sequence colour settings... tree | commitdiff
2013-10-07 Jim ProcterJAL-1385 expose core view model methods in interface tree | commitdiff
2013-10-07 Jim ProcterJAL-1385 Alignment view controller logic implementation... tree | commitdiff
2013-08-30 Jim ProcterJAL-1370 JAL-1371 flags for display and colour of view... tree | commitdiff
2012-11-08 jproctertidy imports tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2012-10-03 jprocterformatting tree | commitdiff
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated... tree | commitdiff
2012-08-29 jprocterJAL-1155 fix panel length calculation for grouped graph... tree | commitdiff
2012-08-28 jprocterremove contaminant imports tree | commitdiff
2012-06-19 jprocterJAL-961 JAL-975 extend api to support removal of worker... tree | commitdiff
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel. tree | commitdiff
2012-06-12 jprocterJAL-961, JAL-1115 - pending test to ensure only one... tree | commitdiff
2012-06-07 jprocterjavatidy tree | commitdiff
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta... tree | commitdiff
2011-11-03 jprocter(JAL-812,JAL-811) - generic test for 'calculation invol... tree | commitdiff
2011-11-03 jprocter(JAL-811) - workers hold references to generated annota... tree | commitdiff
2011-11-03 jprocter(JAL-812) javadoc and api method to relayout annotation... tree | commitdiff
2011-10-28 jprocterextend API tree | commitdiff
2011-10-27 jprocter(JAL-961) methods for checking calculation status tree | commitdiff
2011-10-27 jprocter(JAL-961) more calculation annotation and result object... tree | commitdiff
2011-10-21 jprocterRefactored alignment viewport to use common base, exten... tree | commitdiff
2011-10-21 jprocterextend alignPanel api with OOMHandler call to raise... tree | commitdiff
2011-10-21 jprocterIntroduced new AlignCalcWorker/manager interface. tree | commitdiff
2011-10-18 jprocterbackout parts of the interface from another development... tree | commitdiff
2011-10-18 jprocter(Jalview 3) refactored Graphics2D annotation rendering... tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager... tree | commitdiff
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