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[jalview.git] / src / jalview / gui / Preferences.java

2016-05-27	gmungoc	JAL-1911 use existing object when setting 'Prompt each...	blob \| commitdiff
2016-05-27	tcofoegbu	JAL-1911 further improvement to bugfix - do not save...	blob \| commitdiff \| diff to current
2016-05-26	tcofoegbu	JAL-1911 improvement to bugfix - do not save i18n text...	blob \| commitdiff \| diff to current
2016-05-26	tcofoegbu	JAL-1911 bugfix - do not save i18n text in preference...	blob \| commitdiff \| diff to current
2016-04-14	gmungoc	JAL-1421 type parameter added to some collections	blob \| commitdiff \| diff to current
2016-04-12	gmungoc	JAL-2050 only hide introns if exons are present! Remove...	blob \| commitdiff \| diff to current
2016-04-11	gmungoc	JAL-1705 (new preference option to) hide introns when...	blob \| commitdiff \| diff to current
2015-11-25	tcofoegbu	JAL-1479 bugfix after decoupling SIFTS preference settings	blob \| commitdiff \| diff to current
2015-11-17	tcofoegbu	JAL-1479 Refactored Sifts configuration preference...	blob \| commitdiff \| diff to current
2015-10-22	tcofoegbu	JAL-1479 implemented preferences for SIFTs / Needleman...	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 source formatting and organise imports	blob \| commitdiff \| diff to current
2015-09-02	gmungoc	JAL-1768 set initial 'enabled' state for id width label...	blob \| commitdiff \| diff to current
2015-09-02	gmungoc	JAL-1768 enable fixed width output when auto-width...	blob \| commitdiff \| diff to current
2015-08-18	tcofoegbu	JAL-1835 added UI for BioJSON embbeding preference	blob \| commitdiff \| diff to current
2015-04-13	gmungoc	JAL-1695 new property ENABLE_SPLIT_FRAME	blob \| commitdiff \| diff to current
2015-04-02	gmungoc	JAL-1690 'scale protein as cDNA' options in Preferences...	blob \| commitdiff \| diff to current
2015-03-26	gmungoc	Merge develop to Release_2_8_3_Branch	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	JAL-1683 replace year/version strings with tokens in...	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...	blob \| commitdiff \| diff to current
2015-01-07	gmungoc	JAL-1588 refactoring to StructureViewerBase and related	blob \| commitdiff \| diff to current
2014-12-22	Jim Procter	Merge: 497958b 68dcaa7	blob \| commitdiff \| diff to current
2014-12-15	Jim Procter	JAL-1620 version bump and release notes	blob \| commitdiff \| diff to current
2014-11-27	gmungoc	JAL-1603 if Chimera selected in Preferences, warn if...	blob \| commitdiff \| diff to current
2014-11-18	gmungoc	Merge branch 'Release_2_8_2_Branch' of https://source...	blob \| commitdiff \| diff to current
2014-11-18	Jim Procter	JAL-674 make temperature factor, local secondary struct...	blob \| commitdiff \| diff to current
2014-11-17	gmungoc	JAL-1586 chimera file chooser added, validate on OK...	blob \| commitdiff \| diff to current
2014-11-17	gmungoc	JAL-1528 new Preference CHIMERA_PATH (Preferences ...	blob \| commitdiff \| diff to current
2014-11-13	gmungoc	JAL-1528 new Preference CHIMERA_PATH (Preferences ...	blob \| commitdiff \| diff to current
2014-11-05	gmungoc	JAL-1152 new Structure tab on Preferences for SS deriva...	blob \| commitdiff \| diff to current
2014-11-03	gmungoc	JAL-1152 annotation sorting preferences and help docume...	blob \| commitdiff \| diff to current
2014-09-23	darolmar	JAL-1355	blob \| commitdiff \| diff to current
2014-09-19	darolmar	JAL-1355	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 source formatting	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 fix copyright for 2.8.2	blob \| commitdiff \| diff to current
2014-06-05	Jim Procter	JAL-1517 update copyright to version 2.8.2	blob \| commitdiff \| diff to current
2014-05-22	Jim Procter	JAL-1503 update version in GPL header	blob \| commitdiff \| diff to current
2014-04-21	Jim Procter	JAL-1383 scrubbed envision GUI and documentation	blob \| commitdiff \| diff to current
2014-02-03	Jim Procter	Merge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...	blob \| commitdiff \| diff to current
2014-02-03	Jim Procter	Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge	blob \| commitdiff \| diff to current
2014-01-29	Jim Procter	JAL-1432 updated copyright notices	blob \| commitdiff \| diff to current
2014-01-13	Jim Procter	Merge branch 'JAL-1422_srs' into JAL-1422_srs_r281	blob \| commitdiff \| diff to current
2014-01-13	Jim Procter	JAL-1422 update any existing configuration to replace...	blob \| commitdiff \| diff to current
2014-01-13	Jim Procter	JAL-1422 change default link to EMBL-EBI Search	blob \| commitdiff \| diff to current
2013-12-25	darolmar	JAL-1355 (basic i18n support)	blob \| commitdiff \| diff to current
2013-08-29	darolmar	i18n	blob \| commitdiff \| diff to current
2012-11-08	jprocter	tidy imports	blob \| commitdiff \| diff to current
2012-10-22	jprocter	Jalview 2.8 Source Header	blob \| commitdiff \| diff to current
2012-10-03	jprocter	formatting	blob \| commitdiff \| diff to current
2011-11-09	jprocter	Merge branch 'JAL-986_idwidthprefs' into develop	blob \| commitdiff \| diff to current
2011-11-09	jprocter	(JAL-985,JAL-986) documentation and tooltips	blob \| commitdiff \| diff to current
2011-11-09	jprocter	(JAL-985,JAL-986) preference widgets for settings	blob \| commitdiff \| diff to current
2011-10-10	jprocter	update author list in license for (JAL-826)	blob \| commitdiff \| diff to current
2011-09-27	jprocter	apply version 2.7 copyright	blob \| commitdiff \| diff to current
2011-09-16	jprocter	JAL-468 JAL-936 sort alignment by tree and autosort...	blob \| commitdiff \| diff to current
2011-08-17	jprocter	fix for JAL-888	blob \| commitdiff \| diff to current
2011-07-28	jprocter	refer to local default setting for proxy when connecting to	blob \| commitdiff \| diff to current
2011-07-25	jprocter	use proper encoding for storing colour as user preferen...	blob \| commitdiff \| diff to current
2011-07-22	jprocter	default parameter for colours in annotation shading...	blob \| commitdiff \| diff to current
2010-09-23	jprocter	apply jalview code style	blob \| commitdiff \| diff to current
2010-09-23	jprocter	Jalview 2.6 source licence	blob \| commitdiff \| diff to current
2010-09-17	jprocter	make sure web service menu is always refreshed on 'OK'	blob \| commitdiff \| diff to current
2010-08-04	jprocter	reorganised colourscheme enumeration to make it easier...	blob \| commitdiff \| diff to current
2010-06-19	jprocter	new web services preference tab (JAL-589)	blob \| commitdiff \| diff to current
2010-04-30	jprocter	jalview 2.5 release banner	blob \| commitdiff \| diff to current
2010-04-15	jprocter	ID tooltip preference settings and doc	blob \| commitdiff \| diff to current
2010-04-14	jprocter	profile visualizations are now logos	blob \| commitdiff \| diff to current
2010-04-01	jprocter	refactored copy of groupURL mechanism into new Envision...	blob \| commitdiff \| diff to current
2010-03-30	jprocter	group autoannotation and consensus display settings	blob \| commitdiff \| diff to current
2010-02-10	jprocter	commented out enfin/envision2 sequence submission URL...	blob \| commitdiff \| diff to current
2010-02-09	jprocter	groupURL link preference variables	blob \| commitdiff \| diff to current
2009-10-13	jprocter	added preferences for usage stats, questionnaire check...	blob \| commitdiff \| diff to current
2009-06-08	jprocter	apply gpl development license	blob \| commitdiff \| diff to current
2009-02-06	jprocter	showUnconserved view and group setting	blob \| commitdiff \| diff to current
2008-09-04	jprocter	merge from 2_4_Release branch	blob \| commitdiff \| diff to current
2008-08-15	jprocter	allow '\|' in regex for URL links to be recovered from...	blob \| commitdiff \| diff to current
2007-10-26	jprocter	use new utility class for platform info	blob \| commitdiff \| diff to current
2007-08-13	jprocter	fixed typo in new 2_3 startup file default value	blob \| commitdiff \| diff to current
2007-05-04	amwaterhouse	New example file for version 2.3	blob \| commitdiff \| diff to current
2007-02-09	jprocter	added 'show overview' preference.	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2007-01-29	amwaterhouse	ID_ITALICS option in preferences	blob \| commitdiff \| diff to current
2006-11-20	amwaterhouse	Right align as pref	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-07-26	amwaterhouse	Switch to new srs url	blob \| commitdiff \| diff to current
2006-06-09	amwaterhouse	Size adjustments for MacOSX	blob \| commitdiff \| diff to current
2006-06-07	amwaterhouse	Wrap alignment added to preferences	blob \| commitdiff \| diff to current
2006-06-07	amwaterhouse	DAS sources added	blob \| commitdiff \| diff to current
2006-04-07	amwaterhouse	ModellerOutput set in preferences	blob \| commitdiff \| diff to current
2006-04-07	amwaterhouse	Autocalculate consensus set in preferences	blob \| commitdiff \| diff to current
2006-02-03	amwaterhouse	Slightly bigger for Mac	blob \| commitdiff \| diff to current
2006-01-30	amwaterhouse	Smooth fonts added	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	After merge	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	blob \| commitdiff \| diff to current
2005-09-13	amwaterhouse	EPSOptions added	blob \| commitdiff \| diff to current
2005-09-01	amwaterhouse	Sort by added to preferences	blob \| commitdiff \| diff to current
2005-08-29	amwaterhouse	Include None in default colours	blob \| commitdiff \| diff to current
2005-08-29	amwaterhouse	load sequenceURLLinks static method	blob \| commitdiff \| diff to current
2005-08-19	amwaterhouse	Reset browser every time	blob \| commitdiff \| diff to current
2005-08-19	amwaterhouse	If browser not set, remove property	blob \| commitdiff \| diff to current
2005-08-18	jprocter	made changes to DEFAULT_BROWSER in user preferences...	blob \| commitdiff \| diff to current
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