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Merge develop to Release_2_8_3_Branch
[jalview.git] / src / jalview / gui /
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-03-26 gmungocJAL-1688 compiler warnings removed tree | commitdiff
2015-03-09 Jim ProcterJAL-1565 loading a concise file causes insertions to... tree | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... tree | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... tree | commitdiff
2015-02-02 Charles OfoegbuMerge commit tree | commitdiff
2015-02-02 Charles OfoegbuJAL-1644 revised Finder's implementation to use a flag... tree | commitdiff
2015-01-27 gmungocJAL-1588 new class renamed tree | commitdiff
2015-01-26 gmungocMerge branch 'features/JAL-1588saveChimeraSession'... tree | commitdiff
2015-01-26 gmungocJAL-1588 restoring saved Chimera session(s) tree | commitdiff
2015-01-23 gmungocJAL-1588 first working (?) restore of Chimera session... tree | commitdiff
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method tree | commitdiff
2015-01-23 Jim ProcterJAL-969 drop the hiddenColumns flag in favour of checki... tree | commitdiff
2015-01-23 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen... tree | commitdiff
2015-01-23 Jim ProcterJAL-1551 JAL-962 formatting and code change ripples... tree | commitdiff
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour... tree | commitdiff
2015-01-22 Charles OfoegbuJAL-1553 added applet support for the select-column... tree | commitdiff
2015-01-21 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen... tree | commitdiff
2015-01-20 Charles OfoegbuFurther abstractions and clean up tree | commitdiff
2015-01-20 Charles Ofoegbubasic house keeping tree | commitdiff
2015-01-20 Charles OfoegbuJAL-1553 enhancement of column selection by annotation... tree | commitdiff
2015-01-18 Jim ProcterJAL-1372 i18n and tweaking set/unset representative... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 employ new AnnotationFile reader method to... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 method to hide insertions to current sequence... tree | commitdiff
2015-01-14 Charles OfoegbuMerge branch 'features/JAL-1553_select-columns-by-annot... tree | commitdiff
2015-01-14 Charles OfoegbuModified AnnotationColumnChooser to maintain state... features/JAL-1553_select-columns-by-annotation tree | commitdiff
2015-01-13 Charles OfoegbuMerge branch 'features/JAL-1553_select-columns-by-annot... tree | commitdiff
2015-01-13 Charles OfoegbuRefactored AnnotationColumnChoser and AnnotationColorCh... tree | commitdiff
2015-01-10 Charles OfoegbuJAL-1553 merge commit tree | commitdiff
2015-01-10 Charles OfoegbuJAL-1553 implementation of column selection by annotati... tree | commitdiff
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29... tree | commitdiff
2015-01-09 gmungocJAL-1588 check Chimera session file still exists tree | commitdiff
2015-01-08 gmungocJAL-1588 part work save/restore of Chimera session tree | commitdiff
2015-01-07 Jim ProcterMerge branch 'develop' into JAL-1483_29dev tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 refactor NJTree constructor to allow preconfig... tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 organise imports tree | commitdiff
2015-01-07 gmungocJAL-1551 formatting applied tree | commitdiff
2015-01-07 gmungocJAL-1588 refactoring to StructureViewerBase and related tree | commitdiff
2015-01-06 gmungocJAL-1588 refactoring prior to 'save Chimera project' tree | commitdiff
2014-12-28 gmungocMerge branch 'features/JAL-1596ChimeraREST' into develop tree | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 tree | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes tree | commitdiff
2014-12-09 gmungocJAL-1616 loading of datasets from XML patched tree | commitdiff
2014-12-09 gmungocJAL-1616 loading of datasets from XML patched Release_2_8_2_Branch tree | commitdiff
2014-12-08 Charles Ofoegbumerge commit tree | commitdiff
2014-12-08 Charles OfoegbuJAL-1613 hotfix for duplicated sequence after pairwise... tree | commitdiff
2014-12-08 Charles OfoegbuJAL-1613 hotfix for duplicated sequence after pairwise... tree | commitdiff
2014-12-05 Charles OfoegbuMerge branch 'features/JAL-1605_html-svg-export' into... tree | commitdiff
2014-12-05 Charles OfoegbuJAL-1605 added command line support for html export... tree | commitdiff
2014-12-05 Charles OfoegbuJAL-1605 merge commit tree | commitdiff
2014-12-05 Charles OfoegbuChange the Html export to utilize svg tree | commitdiff
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now... tree | commitdiff
2014-12-01 Jim ProcterMerge branch 'bug/JAL-1610refAnnotationsInViews' into... tree | commitdiff
2014-12-01 Jim ProcterMerge branch 'bug/JAL-1610refAnnotationsInViews' into... tree | commitdiff
2014-11-28 Jim ProcterMerge branch 'JAL-1517_release282' into develop tree | commitdiff
2014-11-28 gmungocJAL-1610 check reference annotations against alignment... tree | commitdiff
2014-11-28 Jim ProcterJAL-1517 formatting tree | commitdiff
2014-11-28 Jim ProcterJAL-1611 revise log level to reduce verbosity tree | commitdiff
2014-11-28 Jim ProcterJAL-1583 javadoc and fix constructor signature tree | commitdiff
2014-11-28 Jim ProcterJAL-1604 formatting tree | commitdiff
2014-11-28 Jim ProcterJAL-1604 revised wording and internationalised dialog tree | commitdiff
2014-11-28 Jim ProcterJAL-1583 refactored addInternalFrame to allow webservic... tree | commitdiff
2014-11-28 Jim ProcterJAL-1517 formatting/tidy tree | commitdiff
2014-11-27 Jim ProcterMerge branch 'patchJAL-674_offset' into Release_2_8_2_B... tree | commitdiff
2014-11-27 Jim ProcterMerge branch 'patchJAL-674_offset' into develop tree | commitdiff
2014-11-27 Jim ProcterJAL-1177 JAL-905 cannot recover sequences from dataset... tree | commitdiff
2014-11-27 Jim ProcterJAL-674 avoid writing \0 for chain code tree | commitdiff
2014-11-27 Jim ProcterMerge branch 'patchJAL-674_offset' into develop tree | commitdiff
2014-11-27 Jim ProcterMerge branch 'patchJAL-674_offset' into Release_2_8_2_B... tree | commitdiff
2014-11-27 gmungocJAL-1603 if Chimera selected in Preferences, warn if... tree | commitdiff
2014-11-27 gmungocMerge branch 'Release_2_8_2_Branch' of https://source... tree | commitdiff
2014-11-27 Jim ProcterJAL-674 JAL-966 new method to retrieve all views tree | commitdiff
2014-11-27 Jim ProcterJAL-966 promote getName to an api method tree | commitdiff
2014-11-27 Charles OfoegbuMerge branch 'bug/JAL-1604_Entire-alignment-submission... tree | commitdiff
2014-11-27 Charles OfoegbuJAL-1604 Entire sequence submision for MSA job bugfix tree | commitdiff
2014-11-27 gmungocMerge branch 'Release_2_8_2_Branch' of https://source... tree | commitdiff
2014-11-26 Charles OfoegbuMerge branch 'bug/JAL-207_pairwise-alignment-context... tree | commitdiff
2014-11-26 Charles OfoegbuMerge branch 'bug/JAL-207_pairwise-alignment-context... tree | commitdiff
2014-11-26 Charles OfoegbuJAL-207 pairwise alignment sequence contexts propergati... tree | commitdiff
2014-11-26 Charles OfoegbuMerge branch 'bug/JAL-998_wrap-sequence-tooltip' into... tree | commitdiff
2014-11-26 Charles OfoegbuMerge branch 'bug/JAL-998_wrap-sequence-tooltip' into... tree | commitdiff
2014-11-26 Charles OfoegbuJAL-998 fixed empty tooltip bug when only one sequence... tree | commitdiff
2014-11-26 Jim ProcterMerge branch 'JAL-674_fixannotlabels' into develop tree | commitdiff
2014-11-26 Jim ProcterJAL-1578 fix logic for showing score when no descriptio... tree | commitdiff
2014-11-26 Jim ProcterJAL-674 JAL-1578 commented code for displaying annotati... tree | commitdiff
2014-11-26 gmungocJAL-1528 NullPointer check / more informative PDB fetch... tree | commitdiff
2014-11-25 Jim ProcterMerge branch 'bug/JAL-689' into develop tree | commitdiff
2014-11-25 Jim Procterfix for JAL-689 ensure fastpainting flag set only when... tree | commitdiff
2014-11-25 Jim Procterformatting tree | commitdiff
2014-11-25 Jim Procterpatch for JAL-1599 - annotation row constructed by... tree | commitdiff
2014-11-25 Charles Ofoegbumerge commit tree | commitdiff
2014-11-25 Charles Ofoegbumerge commit features/JAL-1469_svg-output-for-figure-export tree | commitdiff
2014-11-25 Charles OfoegbuJAL-1469 Added SVGOptions.java for lineart/text renderi... tree | commitdiff
2014-11-25 gmungocJFAL-1594 fix Undo bug; enum EditCommand.Action; basic... tree | commitdiff
2014-11-24 Jim ProcterMerge branch 'JAL-1569_wuss_vienna_broke' into develop tree | commitdiff
2014-11-24 Jim ProcterMerge branch 'JAL-1569_wuss_vienna_broke' into Release_... tree | commitdiff
2014-11-24 Jim ProcterJAL-1264 update annotation panel dimensions before... tree | commitdiff
2014-11-23 Jim ProcterJAL-1569 interactive editing of secondary structure... tree | commitdiff
2014-11-23 Jim ProcterMerge branch 'JAL-1569_wuss_vienna_broke' into develop tree | commitdiff
2014-11-23 Jim ProcterMerge branch 'JAL-1569_wuss_vienna_broke' into Release_... tree | commitdiff
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