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JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
jalview
/
schemes
/
ClustalxColourScheme.java
2021-09-15
gmungoc
JAL-3788 synchronize concurrent findColour() and alignm...
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commitdiff
2019-03-12
gmungoc
JAL-3127 check for null viewport
feature/JAL-3127_seqidChainshading
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diff to current
2018-11-19
Jim Procter
JAL-3127 drop redundant hidden representative sequences...
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diff to current
2018-10-09
Jim Procter
JAL-3127 pass reference to AlignViewportI when creating...
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diff to current
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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diff to current
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
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diff to current
2017-08-16
Jim Procter
JAL-2418 source formatting
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diff to current
2017-06-14
gmungoc
JAL-2598 Sequence.getSequence return a copy of the...
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diff to current
2017-06-09
gmungoc
JAL-2446 merged to spike branch
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diff to current
2017-01-26
gmungoc
JAL-2360 corrected comment
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commitdiff
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diff to current
2017-01-06
gmungoc
JAL-2371 slight simplification of findColour overrides
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diff to current
2017-01-04
gmungoc
JAL-2371 CollectionColourScheme wraps ColourSchemeI
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commitdiff
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diff to current
2016-12-22
gmungoc
JAL-2360 structure viewers now using ColourMenuHelper...
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diff to current
2016-12-21
gmungoc
JAL-2360 comment only
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diff to current
2016-12-20
gmungoc
JAL-2360 ColourSchemes holds configured schemes, AlignF...
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diff to current
2016-12-16
gmungoc
JAL-2360 refactoring for JalviewColourScheme enum,
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diff to current
2016-12-13
gmungoc
JAL-2360 code formatting only and if-else changed to...
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diff to current
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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commitdiff
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diff to current
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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commitdiff
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diff to current
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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commitdiff
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diff to current
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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commitdiff
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diff to current
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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commitdiff
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diff to current
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
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diff to current
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
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diff to current
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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commitdiff
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diff to current
2014-05-01
Jim Procter
JAL-1492 JAL-1397 JAL-643 JAL-969 factory method to...
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commitdiff
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diff to current
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
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diff to current
2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
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diff to current
2012-10-03
jprocter
formatting
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commitdiff
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diff to current
2012-05-30
jprocter
JAL-1114 - refactor methods handling Vectors and Hashta...
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commitdiff
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diff to current
2012-05-22
jprocter
Merge remote-tracking branch 'origin/Tcoffee_JAL-1065...
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commitdiff
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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diff to current
2011-09-27
jprocter
apply version 2.7 copyright
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commitdiff
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diff to current
2010-09-23
jprocter
apply jalview code style
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commitdiff
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diff to current
2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
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diff to current
2010-05-14
jprocter
fix for JAL-533
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commitdiff
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diff to current
2010-04-30
jprocter
jalview 2.5 release banner
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diff to current
2009-06-08
jprocter
apply gpl development license
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diff to current
2008-09-04
jprocter
merge from 2_4_Release branch
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commitdiff
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diff to current
2008-06-30
jprocter
included includeGaps flag in clustalW colour calculatio...
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commitdiff
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diff to current
2007-02-07
amwaterhouse
Formatting
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commitdiff
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diff to current
2006-12-05
amwaterhouse
Sequence is char []
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diff to current
2006-11-28
amwaterhouse
CurrentColour must not be accessed by multiple sequence...
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diff to current
2006-11-28
amwaterhouse
CurrentColour must not be accessed by multiple sequence...
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diff to current
2006-10-10
amwaterhouse
aaIndex replaces aaHash
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diff to current
2006-08-21
amwaterhouse
header updated
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2006-03-16
amwaterhouse
Out of bounds check
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2005-08-22
amwaterhouse
Conservation colour scheme is no more
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commitdiff
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-05-25
amwaterhouse
reset colours added
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2005-05-25
amwaterhouse
all can threshold
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2005-05-03
amwaterhouse
1.1 compatible, formatting changes
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2005-04-15
amwaterhouse
consensus held in residueColour
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2005-03-08
amwaterhouse
if resIndex > 19 return color.white
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commitdiff
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diff to current
2005-02-23
jprocter
bug fix for unaligned sequence sets and clustal colours...
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diff to current
2005-02-10
amwaterhouse
check that we're not off the end of a sequence
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diff to current
2005-02-01
amwaterhouse
Clustal colours now work
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2005-01-14
amwaterhouse
Return color.white if a gap char is detected
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diff to current
2004-12-15
amwaterhouse
colours are right, but not the conservation bit!!
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2004-11-02
amwaterhouse
Jalview Imported Sources
start
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diff to current