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Merge branch 'patch/JAL-4345_pae_epas1_doubleclick' into develop
[jalview.git] / src / jalview / viewmodel / seqfeatures /
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 tree | commitdiff
2022-01-26 Jim ProcterMerge branch 'task/JAL-3763_newDatasetForCds' into... tree | commitdiff
2021-09-02 gmungocJAL-3509 coerce RESNUM to hidden (really) after fetchin... tree | commitdiff
2020-10-22 gmungocJAL-3763 refactored getCoveringMapping for virtual... tree | commitdiff
2020-10-08 gmungocJAL-3763 refactored getCoveringMapping for virtual... tree | commitdiff
2020-07-31 Ben SoaresMerge branch 'releases/Release_2_11_1_Branch' into... tree | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop tree | commitdiff
2020-04-21 Jim ProcterJAL-367 code tidy tree | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... tree | commitdiff
2020-04-07 gmungocJAL-3210 fudge for JalviewJS to avoid IntervalStore... tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-06 gmungocJAL-3187 unit test for findComplementFeaturesAtResidue tree | commitdiff
2020-02-06 gmungocJAL-3509 coerce RESNUM to hidden (really) after fetchin... tree | commitdiff
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-08-07 gmungocJAL-3187 (fudge) look in both alignments for stored... feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-06-14 gmungocJAL-3302 transfer visible 'linked' features to Chimera tree | commitdiff
2019-06-11 gmungocJAL-3187 CDS has same dataset sequence as transcript tree | commitdiff
2019-06-06 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-13 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into... tree | commitdiff
2019-02-21 gmungocJAL-3187 handle no mapping / complement features withou... tree | commitdiff
2019-02-19 gmungocJAL-3187 hacks to get peptide variant in to Jmol hover... tree | commitdiff
2019-01-22 gmungocJAL-3187 clunky sort by renderorder in findComplementFe... tree | commitdiff
2019-01-21 gmungocJAL-3187 findFeaturesAtResidue answer in render order... tree | commitdiff
2019-01-21 gmungocJAL-3187 (hacked up) show complement features on struct... tree | commitdiff
2019-01-18 gmungocJAL-3187 basic first version for tooltips only (renderi... tree | commitdiff
2018-10-23 gmungocJAL-3139 check group visibility when removing 'redundan... bug/JAL-3139colocatedFeatures tree | commitdiff
2018-09-27 gmungocJAL-2791 method that tests all conditions for feature... tree | commitdiff
2018-07-09 gmungocJAL-3060 extract FeatureEditor class task/JAL-3060featureEditor tree | commitdiff
2018-04-18 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-04-18 gmungocJAL-2593 render 'duplicate' features if transparency... tree | commitdiff
2018-01-10 gmungocJAL-1793 update spike branch to latest tree | commitdiff
2018-01-10 gmungocJAL-2791 ignore feature type visibility in getColor() tree | commitdiff
2017-12-08 gmungocJAL-2843 FeatureRenderer.getFeatureFilters returns... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range tooltip... tree | commitdiff
2017-11-23 gmungocJAL-2808 refactor KeyedMatcher as FeatureMatcher with... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present... tree | commitdiff
2017-11-23 gmungocJAL-2808 pass FeatureSettings to controller as array... tree | commitdiff
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings) tree | commitdiff
2017-11-22 gmungocJAL-2808 JAL-2069 FeatureTypeSettings (with new Filters... tree | commitdiff
2017-11-15 gmungocJAL-2816 exclude filtered / thresholded out features... tree | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest tree | commitdiff
2017-11-15 gmungocJAL-2835 code tidy (generic type constructors) tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike branch with latest tree | commitdiff
2017-11-07 gmungocJAL-2069 add 'by attribute' options to graduated featur... tree | commitdiff
2017-11-07 gmungocJAL-2816 tweaks to feature visibility checks tree | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest tree | commitdiff
2017-11-02 gmungocJAL-2808 feature filters held on FeatureRenderer, getCo... tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting tree | commitdiff
2017-08-10 gmungocJAL-2593 don't filter out 'colour by label' features tree | commitdiff
2017-07-24 gmungocspike branch updated from latest features/JAL-2446 tree | commitdiff
2017-07-23 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-22 gmungocJAL-2624 check feature colour threshold when colouring... tree | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch tree | commitdiff
2017-06-09 gmungocJAL-2593 avoid redundant rendering of co-located features tree | commitdiff
2017-06-01 gmungocJAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn tree | commitdiff
2017-05-31 gmungocJAL-2483 JAL-2575 don't sort newly discovered features tree | commitdiff
2017-05-31 gmungocJAL-2574 preparation for Sequence.findFeatures(col1... tree | commitdiff
2017-05-23 gmungocJAL-2490 find features for export as GFF, JAL-2548... tree | commitdiff
2017-05-22 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-09 gmungocJAL-2483 JAL-2481 fixed findAllFeatures to handle null... tree | commitdiff
2017-05-05 gmungocJAL-964 JAL-2510 update Feature Settings from Amend... tree | commitdiff
2017-04-26 gmungocJAL-2490 findFeaturesAtRes with performant feature... tree | commitdiff
2017-04-20 gmungocJAL-2483 JAL-2481 findAllFeatures without scanning... tree | commitdiff
2017-03-22 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-03-14 gmungocJAL-2438 Javadoc updates tree | commitdiff
2017-03-14 gmungocJAL-2438 comment/Javadoc tidies tree | commitdiff
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen... tree | commitdiff
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum, tree | commitdiff
2016-11-21 Jim ProcterJAL-2335 patched FeatureRendererModel.findFeaturesAtRes... bug/JAL-2323disulfideOverview tree | commitdiff
2016-11-16 gmungocJAL-2323 render disulfide bond correctly on overview... tree | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch tree | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... tree | commitdiff
2016-10-05 Jim ProcterJAL-2189 source formatting tree | commitdiff
2016-07-18 Jim ProcterMerge branch 'features/JAL-2068groovyAnnotationWorker... tree | commitdiff
2016-06-20 Jim ProcterMerge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker tree | commitdiff
2016-05-10 gmungocMerge branch 'develop' into features/JAL-1956_featureStyles tree | commitdiff
2016-05-09 gmungocJAL-2018 export graduated feature colours correctly tree | commitdiff
2016-05-03 gmungocJAL-2068 minimised jalview.gui imports, test for remove... tree | commitdiff
2016-04-14 gmungocJAL-1421 typed map / lists, explicit imports, method... tree | commitdiff
2016-02-24 gmungocJAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles tree | commitdiff
2016-02-22 gmungocJAL-1705 first pass at applying preset feature colourin... tree | commitdiff
2016-02-12 gmungocJAL-2008 avoid unnecessary repaints; signatures changed... tree | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 tree | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright tree | commitdiff
2015-10-05 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch tree | commitdiff
2015-09-24 gmungocJAL-1904 parse feature file colours on to alignment... tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports tree | commitdiff
2015-07-23 Jim ProcterJAL-1819 use Float.isNaN() to check for NaNs! tree | commitdiff
2015-06-05 Jim ProcterJAL-1482 JAL-653 refactor feature file import code... tree | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 null features not displayed tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 check dataset for features if none found on... tree | commitdiff
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