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JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
jalview
/
viewmodel
/
seqfeatures
/
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
tree
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commitdiff
2022-01-26
Jim Procter
Merge branch 'task/JAL-3763_newDatasetForCds' into...
tree
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commitdiff
2021-09-02
gmungoc
JAL-3509 coerce RESNUM to hidden (really) after fetchin...
tree
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commitdiff
2020-10-22
gmungoc
JAL-3763 refactored getCoveringMapping for virtual...
tree
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commitdiff
2020-10-08
gmungoc
JAL-3763 refactored getCoveringMapping for virtual...
tree
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commitdiff
2020-07-31
Ben Soares
Merge branch 'releases/Release_2_11_1_Branch' into...
tree
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commitdiff
2020-05-18
gmungoc
Merge branch 'Jalview-JS/develop' into develop
tree
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commitdiff
2020-04-21
Jim Procter
JAL-367 code tidy
tree
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commitdiff
2020-04-16
gmungoc
JAL-3567 report mapped location for virtual features...
tree
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commitdiff
2020-04-07
gmungoc
JAL-3210 fudge for JalviewJS to avoid IntervalStore...
tree
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commitdiff
2020-03-30
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2020-03-06
gmungoc
JAL-3187 unit test for findComplementFeaturesAtResidue
tree
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commitdiff
2020-02-06
gmungoc
JAL-3509 coerce RESNUM to hidden (really) after fetchin...
tree
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commitdiff
2019-10-08
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2019-08-07
gmungoc
JAL-3187 (fudge) look in both alignments for stored...
feature/JAL-3187linkedFeatures
tree
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commitdiff
2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-06-14
gmungoc
JAL-3302 transfer visible 'linked' features to Chimera
tree
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commitdiff
2019-06-11
gmungoc
JAL-3187 CDS has same dataset sequence as transcript
tree
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commitdiff
2019-06-06
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
tree
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commitdiff
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2019-03-01
gmungoc
Merge branch 'bug/JAL-2791exportFilteredFeature' into...
tree
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commitdiff
2019-02-21
gmungoc
JAL-3187 handle no mapping / complement features withou...
tree
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commitdiff
2019-02-19
gmungoc
JAL-3187 hacks to get peptide variant in to Jmol hover...
tree
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commitdiff
2019-01-22
gmungoc
JAL-3187 clunky sort by renderorder in findComplementFe...
tree
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commitdiff
2019-01-21
gmungoc
JAL-3187 findFeaturesAtResidue answer in render order...
tree
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commitdiff
2019-01-21
gmungoc
JAL-3187 (hacked up) show complement features on struct...
tree
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commitdiff
2019-01-18
gmungoc
JAL-3187 basic first version for tooltips only (renderi...
tree
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commitdiff
2018-10-23
gmungoc
JAL-3139 check group visibility when removing 'redundan...
bug/JAL-3139colocatedFeatures
tree
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commitdiff
2018-09-27
gmungoc
JAL-2791 method that tests all conditions for feature...
tree
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commitdiff
2018-07-09
gmungoc
JAL-3060 extract FeatureEditor class
task/JAL-3060featureEditor
tree
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commitdiff
2018-04-18
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-04-18
gmungoc
JAL-2593 render 'duplicate' features if transparency...
tree
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commitdiff
2018-01-10
gmungoc
JAL-1793 update spike branch to latest
tree
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commitdiff
2018-01-10
gmungoc
JAL-2791 ignore feature type visibility in getColor()
tree
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commitdiff
2017-12-08
gmungoc
JAL-2843 FeatureRenderer.getFeatureFilters returns...
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range tooltip...
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 refactor KeyedMatcher as FeatureMatcher with...
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range, Present...
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 pass FeatureSettings to controller as array...
tree
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commitdiff
2017-11-22
gmungoc
JAL-2069 spike updated with latest (FeatureTypeSettings)
tree
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commitdiff
2017-11-22
gmungoc
JAL-2808 JAL-2069 FeatureTypeSettings (with new Filters...
tree
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commitdiff
2017-11-15
gmungoc
JAL-2816 exclude filtered / thresholded out features...
tree
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commitdiff
2017-11-15
gmungoc
JAL-2835 spike updated with latest
tree
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commitdiff
2017-11-15
gmungoc
JAL-2835 code tidy (generic type constructors)
tree
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commitdiff
2017-11-07
gmungoc
JAL-2069 update spike branch with latest
tree
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commitdiff
2017-11-07
gmungoc
JAL-2069 add 'by attribute' options to graduated featur...
tree
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commitdiff
2017-11-07
gmungoc
JAL-2816 tweaks to feature visibility checks
tree
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commitdiff
2017-11-02
gmungoc
JAL-2808 spike updated with latest
tree
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commitdiff
2017-11-02
gmungoc
JAL-2808 feature filters held on FeatureRenderer, getCo...
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-08-10
gmungoc
JAL-2593 don't filter out 'colour by label' features
tree
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commitdiff
2017-07-24
gmungoc
spike branch updated from latest features/JAL-2446
tree
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commitdiff
2017-07-23
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-07-22
gmungoc
JAL-2624 check feature colour threshold when colouring...
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-06-09
gmungoc
JAL-2593 avoid redundant rendering of co-located features
tree
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commitdiff
2017-06-01
gmungoc
JAL-2754 Sequence.findFeatures(fromCol, toCol)
features/JAL-2754findFeaturesByColumn
tree
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commitdiff
2017-05-31
gmungoc
JAL-2483 JAL-2575 don't sort newly discovered features
tree
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commitdiff
2017-05-31
gmungoc
JAL-2574 preparation for Sequence.findFeatures(col1...
tree
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commitdiff
2017-05-23
gmungoc
JAL-2490 find features for export as GFF, JAL-2548...
tree
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commitdiff
2017-05-22
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-09
gmungoc
JAL-2483 JAL-2481 fixed findAllFeatures to handle null...
tree
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commitdiff
2017-05-05
gmungoc
JAL-964 JAL-2510 update Feature Settings from Amend...
tree
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commitdiff
2017-04-26
gmungoc
JAL-2490 findFeaturesAtRes with performant feature...
tree
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commitdiff
2017-04-20
gmungoc
JAL-2483 JAL-2481 findAllFeatures without scanning...
tree
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commitdiff
2017-03-22
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-03-14
gmungoc
JAL-2438 Javadoc updates
tree
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commitdiff
2017-03-14
gmungoc
JAL-2438 comment/Javadoc tidies
tree
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commitdiff
2017-03-13
gmungoc
JAL-2438 FeatureColourFinder refactored from FeatureRen...
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 refactoring for JalviewColourScheme enum,
tree
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commitdiff
2016-11-21
Jim Procter
JAL-2335 patched FeatureRendererModel.findFeaturesAtRes...
bug/JAL-2323disulfideOverview
tree
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commitdiff
2016-11-16
gmungoc
JAL-2323 render disulfide bond correctly on overview...
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 source formatting
tree
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commitdiff
2016-07-18
Jim Procter
Merge branch 'features/JAL-2068groovyAnnotationWorker...
tree
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commitdiff
2016-06-20
Jim Procter
Merge branch 'develop' into features/JAL-2068groovyAnno...
features/JAL-2068groovyAnnotationWorker
tree
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commitdiff
2016-05-10
gmungoc
Merge branch 'develop' into features/JAL-1956_featureStyles
tree
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commitdiff
2016-05-09
gmungoc
JAL-2018 export graduated feature colours correctly
tree
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commitdiff
2016-05-03
gmungoc
JAL-2068 minimised jalview.gui imports, test for remove...
tree
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commitdiff
2016-04-14
gmungoc
JAL-1421 typed map / lists, explicit imports, method...
tree
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commitdiff
2016-02-24
gmungoc
JAL-2015 JAL-1956 rollout of FeatureColourI in place of
JAL-1956_featureStyles
tree
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commitdiff
2016-02-22
gmungoc
JAL-1705 first pass at applying preset feature colourin...
tree
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commitdiff
2016-02-12
gmungoc
JAL-2008 avoid unnecessary repaints; signatures changed...
tree
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
tree
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commitdiff
2015-10-05
Jim Procter
Merge branch 'develop' into Release_2_9_0b1_Branch
tree
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commitdiff
2015-09-24
gmungoc
JAL-1904 parse feature file colours on to alignment...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 licencing for new files in src
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-07-23
Jim Procter
JAL-1819 use Float.isNaN() to check for NaNs!
tree
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commitdiff
2015-06-05
Jim Procter
JAL-1482 JAL-653 refactor feature file import code...
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
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commitdiff
2015-01-07
Jim Procter
JAL-1483 null features not displayed
tree
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commitdiff
2015-01-07
Jim Procter
JAL-1483 check dataset for features if none found on...
tree
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commitdiff
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