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JAL-2144 TODO - new methods for canonicalisation and comparison of source strings...
[jalview.git] / src / jalview / viewmodel /
2016-06-27 gmungocJAL-2133 refactored duplicated code to AlignmentViewport tree | commitdiff
2016-06-22 gmungocJAL-1982 defensive checks for null annotations array tree | commitdiff
2016-06-21 Jim ProcterMerge branch 'features/JAL-1956_featureStyles' into... tree | commitdiff
2016-06-02 tcofoegbuJAL-1944 java doc update and minor house keeping tree | commitdiff
2016-06-01 tcofoegbuJAL-1944 updated bugfix implementation tree | commitdiff
2016-05-31 tcofoegbuJAL-1944 fix for visible seqs sometimes been replaced... tree | commitdiff
2016-05-27 gmungocJAL-1989 tightened up use of flag for 'column selection... tree | commitdiff
2016-05-10 gmungocMerge branch 'develop' into features/JAL-1956_featureStyles tree | commitdiff
2016-05-09 gmungocJAL-2018 export graduated feature colours correctly tree | commitdiff
2016-04-27 Jim ProcterJAL-2085 JAL-2086 fix hiddenRepSequence and new referen... tree | commitdiff
2016-04-14 gmungocJAL-1421 typed map / lists, explicit imports, method... tree | commitdiff
2016-04-04 Jim ProcterJAL-969 refactor columnselection operation (during... tree | commitdiff
2016-03-07 gmungocJAL-2023 CDS sequences added to / share alignment dataset tree | commitdiff
2016-03-01 gmungocMerge branch 'develop' into features/JAL-653_JAL-1766_h... tree | commitdiff
2016-02-26 tcofoegbuJAL-1994 updated implementation for broken tests tree | commitdiff
2016-02-26 tcofoegbuJAL-1994 fix for broken tests tree | commitdiff
2016-02-25 gmungocMerge branch 'develop' into features/JAL-653_JAL-1766_h... tree | commitdiff
2016-02-24 gmungocJAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles tree | commitdiff
2016-02-22 tcofoegbuJAL-1944 bugfix for error when exporting hidden sequenc... tree | commitdiff
2016-02-22 gmungocJAL-1705 first pass at applying preset feature colourin... tree | commitdiff
2016-02-12 gmungocJAL-2008 avoid unnecessary repaints; signatures changed... tree | commitdiff
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge tree | commitdiff
2016-01-11 gmungocJAL-1989 more unit tests and encapsulation for ColumnSe... tree | commitdiff
2015-12-22 gmungocJAL-653 realise virtual mappings and align when adding... tree | commitdiff
2015-09-24 gmungocJAL-1904 parse feature file colours on to alignment... tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports tree | commitdiff
2015-09-03 Jim ProcterJAL-961 TODO use workers for calculations supporting... tree | commitdiff
2015-09-03 Jim ProcterJAL-1551 source tidy tree | commitdiff
2015-08-17 gmungocJAL-1691 scan full width and depth of alignment for... tree | commitdiff
2015-07-23 Jim ProcterJAL-1819 use Float.isNaN() to check for NaNs! tree | commitdiff
2015-06-30 gmungocJAL-1691 trackpad scrolling goes to full width even... tree | commitdiff
2015-06-19 Jim ProcterJAL-653 JAL-1780 dropped av.setHasHiddenRows() and... tree | commitdiff
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports tree | commitdiff
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments tree | commitdiff
2015-06-10 tcofoegbuJAL-1641 updated applet version tree | commitdiff
2015-06-05 Jim ProcterJAL-1482 JAL-653 refactor feature file import code... tree | commitdiff
2015-04-29 gmungocJAL-1686 ViewStyle.hashCode implemented tree | commitdiff
2015-04-28 gmungocJAL-1684 removed reflection from ViewStyle (to Junit... tree | commitdiff
2015-04-27 gmungocJAL-1691 more stable linked scrolling across split... tree | commitdiff
2015-04-13 gmungocJAL-1690 show 'scale protein' in protein _and_ dna... tree | commitdiff
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5... tree | commitdiff
2015-04-02 gmungocJAL-1690 'scale protein as cDNA' options in Preferences... tree | commitdiff
2015-04-01 gmungocJAL-1264 reinstate Show annotations menu item tree | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... tree | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... tree | commitdiff
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor tree | commitdiff
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method tree | commitdiff
2015-01-23 Jim ProcterJAL-969 drop the hiddenColumns flag in favour of checki... tree | commitdiff
2015-01-23 Jim ProcterJAL-969 javadoc and mark interface overrides for clarity tree | commitdiff
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour... tree | commitdiff
2015-01-21 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen... tree | commitdiff
2015-01-20 Charles OfoegbuFurther abstractions and clean up tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 method to hide insertions to current sequence... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 wrappers for common checks on ColumnSelection tree | commitdiff
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29... tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 null features not displayed tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 check dataset for features if none found on... tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 organise imports tree | commitdiff
2015-01-07 Jim ProcterJAL-1483 making type visible also adds it to registry tree | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 tree | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes tree | commitdiff
2014-11-17 gmungocJAL-1293 hide/show sequence annotations with hide/revea... tree | commitdiff
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc tree | commitdiff
2014-09-12 j.procter@dundee... JAL-1486 JAL-535 refactor code for trimming alignment... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1482 feature renderer and manipulation code refacto... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 move show sequence feature and sequence featur... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 abstract feature renderer model holds render... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 feature renderer settings for store/exchange... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 model and api for feature display list on... tree | commitdiff
2014-08-08 j.procter@dundee... JAL-1482 nascent feature settings model and controller... tree | commitdiff
2014-06-13 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-1483_featu... tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 tree | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header tree | commitdiff
2014-05-02 Jim ProcterMerge branch 'Release_2_8_1_Branch' into JAL-1372_refer... tree | commitdiff
2014-05-01 Jim ProcterJAL-1492 JAL-1397 JAL-643 JAL-969 pull up global and... tree | commitdiff
2014-05-01 Jim ProcterJAL-961 store result of conservation analysis worker... tree | commitdiff
2014-04-21 Jim ProcterJAL-967 abstract feature renderer tree | commitdiff
2014-04-21 Jim Procterdon't unhook existing group associated annotation JAL... tree | commitdiff
2014-04-21 Jim Procterdon't finness the alignment annotation modification... tree | commitdiff
2014-04-21 Jim ProcterJAL-1473 show available score matrices for use in PCA... tree | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge tree | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices tree | commitdiff
2013-10-11 Jim ProcterJAL-1164 regression on JAL-1292 use bitset to mark... tree | commitdiff
2013-10-11 Jim ProcterJAL-1164 regression on JAL-1292 use bitset to mark... tree | commitdiff
2013-10-11 Jim ProcterJAL-1385 expose core view model methods in interface tree | commitdiff
2013-10-07 Jim ProcterJAL-1385 JAL-535 refactor sequence colour settings... tree | commitdiff
2013-10-07 Jim ProcterJAL-1385 expose core view model methods in interface tree | commitdiff
2013-08-30 Jim ProcterJAL-1367 allow reference sequence to be shown in bold... tree | commitdiff
2013-08-30 Jim ProcterJAL-1370 JAL-1371 flags for display and colour of view... tree | commitdiff
2013-06-23 Jim ProcterJAL-1230 simplify initialisation of consensus, conserva... tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2012-10-03 jprocterformatting tree | commitdiff
2012-09-27 jprocterJAL-1179 - regression from JAL-1030 patch implicitly... tree | commitdiff
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated... tree | commitdiff
2012-08-29 jprocterJAL-1155 fix panel length calculation for grouped graph... tree | commitdiff
2012-06-15 jprocterJAL-1125 option to switch between Jalview and SeqSpace... tree | commitdiff
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