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[jalview.git]
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src
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jalview
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ws
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jws2
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2015-07-23
Jim Procter
Merge branch 'features/JAL-1759jmolUpdate' into develop
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commitdiff
2015-07-23
Jim Procter
JAL-1819 use Float.isNaN() to check for NaNs!
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commitdiff
2015-06-26
gmungoc
Merge branch 'develop' into features/JAL-1759jmolUpdate
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commitdiff
2015-06-26
gmungoc
JAL-1759 updates for Jmol 14.2.14_25.06.11
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commitdiff
2015-06-25
Jim Procter
JAL-1691 avoid NPE when original split frame has been...
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
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commitdiff
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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commitdiff
2014-12-01
Jim Procter
JAL-1601 ignore the JABA Jpred client in Jalview 2...
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commitdiff
2014-11-28
Jim Procter
JAL-1611 revise log level to reduce verbosity
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commitdiff
2014-11-28
Jim Procter
JAL-1583 back out original fix and simply check MSAWSTh...
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commitdiff
2014-11-28
Jim Procter
JAL-1583 formatting
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commitdiff
2014-11-28
Jim Procter
JAL-1583 new validInput flag set according to validity...
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commitdiff
2014-11-28
Jim Procter
JAL-1517 formatting/tidy
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commitdiff
2014-11-27
Charles Ofoegbu
JAL-1604 Entire sequence submision for MSA job bugfix
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commitdiff
2014-11-27
Charles Ofoegbu
Merge branch 'bug/JAL-1583_MSA_webservice_validation...
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commitdiff
2014-11-27
Charles Ofoegbu
Merge branch 'bug/JAL-1583_MSA_webservice_validation...
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commitdiff
2014-11-27
Charles Ofoegbu
modified regex for sequence validation
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commitdiff
2014-11-19
Charles Ofoegbu
JAL-1583 MSA webservice validation
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commitdiff
2014-11-19
gmungoc
JAL-1342 new command-line parameter -jabaws <URL>
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commitdiff
2014-11-19
Charles Ofoegbu
merge commit
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commitdiff
2014-11-18
gmungoc
JAL-1582 removing finalize() as may have unexpected...
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commitdiff
2014-11-18
Charles Ofoegbu
JAL-1583 MSA webservice client side validation
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commitdiff
2014-11-18
gmungoc
JAL-1582 quicker tooltip on service presets (and code...
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commitdiff
2014-11-18
Jim Procter
Merge branch 'JAL-1587_promotedisorder' into Release_2_...
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commitdiff
2014-11-17
Charles Ofoegbu
Undo changes to JabaWsServerQuery.java
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commitdiff
2014-11-17
Charles Ofoegbu
Undo changes to JabaWsServerQuery.java
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commitdiff
2014-11-17
Jim Procter
JAL-1587 propagate results of JABA sequence based predi...
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commitdiff
2014-11-17
Charles Ofoegbu
JAL-1043 patch to show warning dialog when webservice...
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commitdiff
2014-11-14
Jim Procter
Merge branch 'develop' into JAL-1483_featureBasedTreeCalc
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commitdiff
2014-10-03
Jim Procter
JAL-1355 removed all top level html tags from message...
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commitdiff
2014-09-26
darolmar
JAL-1355
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commitdiff
2014-09-23
darolmar
JAL-1355
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commitdiff
2014-09-19
darolmar
JAL-1355
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commitdiff
2014-09-19
darolmar
JAL-1355
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commitdiff
2014-07-18
j.procter@dundee...
JAL-1379 new look JPred results
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commitdiff
2014-06-13
Jim Procter
Merge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
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commitdiff
2014-06-10
Jim Procter
JAL-1379 a JPred v3.0.1 client via JABA 2.1
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commitdiff
2014-06-10
Jim Procter
JAL-1379 allow services with an MSA interface to create...
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commitdiff
2014-06-10
Jim Procter
tidy source
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commitdiff
2014-06-10
Jim Procter
JAL-1379 refactor Jws2 service client so dynamic servic...
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commitdiff
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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commitdiff
2014-05-13
Jim Procter
JAL-1239 make doubly sure sub job status is set to...
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commitdiff
2014-04-27
Jim Procter
workaround for JAL-1319 - catch unexpected NPE thrown...
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commitdiff
2014-04-27
Jim Procter
JAL-1164 (regression) reinstate 'apply disorder predict...
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commitdiff
2014-04-21
Jim Procter
JAL-967 JAL-1482 new feature renderer api - needs more...
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commitdiff
2014-04-21
Jim Procter
patch for JAL-1465 - set min/max thresholds for each...
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commitdiff
2014-02-21
Jim Procter
patch for JAL-1449 - continuance of JAL-1364 - check...
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commitdiff
2014-02-03
Jim Procter
Merge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
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commitdiff
2014-02-03
Jim Procter
Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
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commitdiff
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
2013-12-25
darolmar
JAL-1355 (basic i18n support)
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commitdiff
2013-10-11
Jim Procter
Merge branch 'JAL-1164_disorderforselection' into Relea...
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commitdiff
2013-10-11
Jim Procter
JAL-1164 scope bySequence analysis methods to start...
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commitdiff
2013-10-11
Jim Procter
JAL-1164 only predict on currently selected sequences...
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commitdiff
2013-10-05
Jim Procter
JAL-1379 JAL-1378 exclusion list property to ignore...
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commitdiff
2013-10-05
Jim Procter
JAL-1378 hack to place 'Predictors' into Secondary...
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commitdiff
2013-10-05
Jim Procter
JAL-1364 use gapMap to map RNAalifold annotation onto...
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commitdiff
2013-10-05
Jim Procter
JAL-1379 JAL-1358 only enable/disable menu entries...
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commitdiff
2013-10-04
Jim Procter
JAL-1378 JWS-71 update to from-source build of JABA...
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commitdiff
2013-09-25
Jim Procter
JAL-1365 unified GUI building for AACon and RNAAliFold...
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commitdiff
2013-09-25
Jim Procter
JAL-1365 use AlignAnalysisUIText class to provide metad...
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commitdiff
2013-09-25
Jim Procter
JAL-1365 refactored core methods from RNAAliFold and...
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commitdiff
2013-09-20
Jim Procter
formatting
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commitdiff
2013-09-03
Jim Procter
Merge branch 'JAL-1373_precision' into RNAalifold
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commitdiff
2013-08-30
Daniel Barton
Colour be RNA helices bug fixed
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commitdiff
2013-08-30
Daniel Barton
JAL-1358 Cleaned up RNAalifoldClient.java. RNA helices...
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commitdiff
2013-08-28
Daniel Barton
RNAalifoldClient updated to be more like AAConClient...
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 jalview displays some RNA struture annotation...
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commitdiff
2013-08-27
Jim Procter
JAL-1359 simpler logic for deciding if all threads...
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 RNAStructExportImport test file mirrors Disord...
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commitdiff
2013-08-27
Daniel Barton
JAL-1358 Just the eclipse project/classpath files so...
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commitdiff
2013-06-18
Jim Procter
JAL-1320 ascending alphabetical order
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commitdiff
2013-06-18
Jim Procter
JAL-1320 sort options and parameters according to their...
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commitdiff
2013-06-18
Jim Procter
typo
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commitdiff
2013-06-17
Jim Procter
JAL-1319 (blacklist fix) check for presence of a score...
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commitdiff
2013-05-24
Jim Procter
typo
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commitdiff
2012-12-11
jprocter
JAL-1217 check and avoid NPE if no datastore object...
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commitdiff
2012-12-11
jprocter
JAL-1217 report exception for service when no datastore...
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commitdiff
2012-11-08
jprocter
tidy imports
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commitdiff
2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
2012-10-03
jprocter
formatting
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commitdiff
2012-09-21
jprocter
JAL-849 try harder and wait for longer for JABAWS to...
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commitdiff
2012-09-21
jprocter
JAL-1171 refactor code to allow gui update for global...
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commitdiff
2012-09-21
jprocter
JAL-1165 visual delay whilst results are processed.
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commitdiff
2012-09-05
jprocter
formatting
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commitdiff
2012-09-05
jprocter
patch for NPE when no services are available to resolve...
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commitdiff
2012-09-05
jprocter
JAL-975 null any existing preset if user has supplied...
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commitdiff
2012-09-05
jprocter
JAL-976 fix AACon name typo in source and GUI
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commitdiff
2012-09-04
jprocter
off by one for sequence associated annotation
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commitdiff
2012-09-04
jprocter
unused variable
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commitdiff
2012-09-04
jprocter
JAL-974 JRonn thresholds
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commitdiff
2012-09-03
jprocter
JAL-975 JAL-974 JAL-976 always adjust height after...
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commitdiff
2012-09-03
jprocter
JAL-974 show thresholds for disorder predictor annotati...
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commitdiff
2012-08-31
jprocter
JAL-974 - ensure annotation created in local sequence...
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commitdiff
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