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jalview.git
2015-01-18
Jim Procter
JAL-1628 formatting and javadoc
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2015-01-18
Jim Procter
JAL-1628 method to hide insertions to current sequence...
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2015-01-18
Jim Procter
JAL-1628 wrappers for common checks on ColumnSelection
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2015-01-18
Jim Procter
JAL-1628 ColumnSelection method to hide insertions...
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2015-01-18
Jim Procter
JAL-1628 new method to get a list of insertions in...
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2015-01-18
Jim Procter
always use interface rather than field access
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2015-01-18
Jim Procter
JAL-1372 JAL-1114 JAL-1628 tidy sequenceI/sequence
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2015-01-09
Jim Procter
Merge branch 'JAL-1372_referenceseq' into feature_29...
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2015-01-09
Charles Ofoegbu
Merge branch 'features/JAL-1605_html-svg-export' into...
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2015-01-09
Jim Procter
Merge branch 'JAL-1483_29dev' into develop
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2015-01-09
Jim Procter
JAL-1483 formatting
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2015-01-09
Jim Procter
JAL-1483 remember to look at base dataset sequence...
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2015-01-08
Jim Procter
Merge branch 'JAL-1483_29dev' into develop
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2015-01-07
Jim Procter
Merge branch 'develop' into JAL-1483_29dev
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2015-01-07
Jim Procter
JAL-1483 patches to make test case pass: hamming distan...
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2015-01-07
Jim Procter
JAL-1483 basic test of sequence similarity score model...
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2015-01-07
Jim Procter
JAL-1483 source formatting
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2015-01-07
Jim Procter
JAL-1483 refactor NJTree constructor to allow preconfig...
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2015-01-07
Jim Procter
JAL-1483 register feature similarity model
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2015-01-07
Jim Procter
JAL-1483 null features not displayed
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2015-01-07
Jim Procter
JAL-1483 check dataset for features if none found on...
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2015-01-07
Jim Procter
JAL-1483 organise imports
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2015-01-07
Jim Procter
JAL-1483 making type visible also adds it to registry
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2014-12-28
gmungoc
Merge branch 'features/JAL-1596ChimeraREST' into develop
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2014-12-22
Charles Ofoegbu
Patch to synchronize title svg and allignment svg scrolling
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2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
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2014-12-15
Charles Ofoegbu
update HtmlSvgOutput to ignore browser invocation when...
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2014-12-15
Charles Ofoegbu
update HtmlSvgOutput to ignore browser invocation when...
features/JAL-1605_html-svg-export
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2014-12-14
Mungo Carstairs
JAL-1596 set HTTP 1.1 in HttpClient
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2014-12-09
gmungoc
JAL-1616 loading of datasets from XML patched
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2014-12-08
Charles Ofoegbu
merge commit
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2014-12-08
Charles Ofoegbu
JAL-1613 hotfix for duplicated sequence after pairwise...
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2014-12-08
Charles Ofoegbu
Added annotation export configuration for Html export...
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2014-12-05
Charles Ofoegbu
Merge branch 'features/JAL-1605_html-svg-export' into...
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2014-12-05
Charles Ofoegbu
JAL-1605 added command line support for html export...
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2014-12-05
Charles Ofoegbu
modified html css
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2014-12-05
Charles Ofoegbu
JAL-1605 merge commit
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2014-12-05
Charles Ofoegbu
Change the Html export to utilize svg
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2014-12-05
gmungoc
JAL-1614 flag 'protein' removed
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2014-12-05
gmungoc
JAL-1614 flag 'protein' removed
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2014-12-05
gmungoc
JAL-1609 refactored colour by sequence command, now...
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2014-12-05
gmungoc
Merge branch 'Release_2_8_2_Branch' of local repository...
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2014-12-03
gmungoc
Merge branch 'Release_2_8_2_Branch' of https://source...
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2014-12-03
gmungoc
JAL-1609 wip on Chimera colour by sequence
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2014-12-03
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-03
Jim Procter
JAL-1517 update applet authors list
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2014-12-03
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-03
Jim Procter
JAL-1517 disable desktop 'take snapshot' menu item...
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2014-12-03
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-03
Jim Procter
JAL-1517 dropped jnlp file in help documentation in...
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2014-12-03
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-03
Jim Procter
JAL-1517 updated library licensing info
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2014-12-03
Jim Procter
JAL-1517 release notes
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2014-12-02
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-02
Jim Procter
JAL-1517 typo
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2014-12-02
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-02
Jim Procter
JAL-1517 TOC items must be on one line for help2Website
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2014-12-02
Jim Procter
Merge branch 'JAL-1602_282_release' into Release_2_8_2_...
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2014-12-02
Jim Procter
JAL-1602 tweak VM inclusion options
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2014-12-02
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-12-02
Jim Procter
JAL-1517 documentation for 2.8.2 release
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2014-12-02
Jim Procter
Merge branch 'JAL-1602_282_release' into Release_2_8_2_...
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2014-12-02
Jim Procter
JAL-1602 typo in jsonsimple jar
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2014-12-02
Jim Procter
Merge branch 'JAL-1602_282_release' into Release_2_8_2_...
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2014-12-02
Jim Procter
JAL-1602 add missing jars to install
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2014-12-01
Jim Procter
Merge branch 'JAL-1602_282_release' into Release_2_8_2_...
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2014-12-01
Jim Procter
JAL-1602 upgrade to InstallAnywhere 2014 J17 runtimes
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2014-12-01
Jim Procter
JAL-1199 JAL-1569 incremental patch allow non-standard...
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2014-12-01
Jim Procter
JAL-1517 updating author list
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2014-12-01
Jim Procter
JAL-1517 updating authors list
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2014-12-01
Jim Procter
JAL-795 hack to ignore black colour in annotation element.
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2014-12-01
Jim Procter
JAL-1601 ignore the JABA Jpred client in Jalview 2...
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2014-12-01
gmungoc
JAL-429 Phylip added to help page
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2014-12-01
gmungoc
JAL-1544 typos/formatting in help (and Phylip added)
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2014-12-01
Jim Procter
Merge branch 'bug/JAL-1610refAnnotationsInViews' into...
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2014-12-01
Jim Procter
Merge branch 'bug/JAL-1610refAnnotationsInViews' into...
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2014-12-01
Jim Procter
file for JAL-1268 jalview.io.Jalview2xmlTests.testTCoff...
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2014-11-28
Jim Procter
Merge branch 'JAL-1517_release282' into develop
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2014-11-28
Jim Procter
Merge branch 'JAL-1517_release282' into Release_2_8_2_B...
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2014-11-28
Jim Procter
JAL-1517 first stab at release notes... lots of documen...
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2014-11-28
gmungoc
JAL-1610 check reference annotations against alignment...
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2014-11-28
Jim Procter
JAL-1522 output installation type to stdout
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2014-11-28
Jim Procter
JAL-1522 remove build/deployment details imported from...
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2014-11-28
Jim Procter
JAL-1517 formatting
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2014-11-28
Jim Procter
JAL-1611 revise log level to reduce verbosity
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2014-11-28
Jim Procter
JAL-1583 javadoc and fix constructor signature
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2014-11-28
Jim Procter
JAL-1342 document argument to specify preferred JABA...
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2014-11-28
Jim Procter
JAL-1604 formatting
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2014-11-28
Jim Procter
JAL-1604 revised wording and internationalised dialog
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2014-11-28
Jim Procter
JAL-1583 back out original fix and simply check MSAWSTh...
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2014-11-28
Jim Procter
JAL-1583 formatting
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2014-11-28
Jim Procter
JAL-1583 new validInput flag set according to validity...
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2014-11-28
Jim Procter
JAL-1583 refactored addInternalFrame to allow webservic...
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2014-11-28
Jim Procter
JAL-1517 formatting/tidy
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2014-11-28
gmungoc
JAL-1596 first REST interface coded
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2014-11-27
Jim Procter
JAL-1517 svg==scalable :)
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2014-11-27
Jim Procter
Merge branch 'patchJAL-674_offset' into Release_2_8_2_B...
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2014-11-27
Jim Procter
Merge branch 'patchJAL-674_offset' into develop
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2014-11-27
Jim Procter
JAL-674 add sequence associated annotation rows to...
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2014-11-27
Jim Procter
JAL-1177 JAL-905 cannot recover sequences from dataset...
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