source.jalview.org Git - jalview.git/search

git://source.jalview.org / jalview.git / search

2018-05-11	gmungoc	JAL-2629 update spike branch to latest	commit \| commitdiff \| tree
2018-04-23	gmungoc	JAL-2957 don't validate input on arrow keys	commit \| commitdiff \| tree
2018-04-23	gmungoc	JAL-591 ensure slider hidden if text input field only	commit \| commitdiff \| tree
2018-04-20	gmungoc	JAL-2629 update spikes/mungo to latest	commit \| commitdiff \| tree
2018-03-30	gmungoc	Updated with latest from mchmmer branch	commit \| commitdiff \| tree
2018-02-09	gmungoc	JAL-1793 update spike to latest	commit \| commitdiff \| tree
2018-02-05	gmungoc	JAL-2897 more informative description on synonymous...	commit \| commitdiff \| tree
2018-02-02	gmungoc	JAL-984 merged to spikes-mungo	commit \| commitdiff \| tree
2018-01-30	gmungoc	JAL-1793 update spike build to latest incl stop and...	commit \| commitdiff \| tree
2018-01-10	gmungoc	JAL-1793 update spike branch to latest	commit \| commitdiff \| tree
2017-12-04	gmungoc	JAL-2808 JAL-2850 update spike build to latest	commit \| commitdiff \| tree
2017-12-04	gmungoc	JAL-2850 JAL-1766 option to load contig sequence referenced...	commit \| commitdiff \| tree
2017-12-04	gmungoc	JAL-2845 locate reverse strand insertion as complement...	commit \| commitdiff \| tree
2017-12-04	gmungoc	JAL-2835 small refactor to only extract transcript...	commit \| commitdiff \| tree
2017-12-01	gmungoc	JAL-2835 spike updated to latest (use specific SO term...	commit \| commitdiff \| tree
2017-11-24	gmungoc	JAL-2808 update spike to latest	commit \| commitdiff \| tree
2017-11-23	gmungoc	JAL-2808 update spike to latest (filter range tooltip...	commit \| commitdiff \| tree
2017-11-23	gmungoc	JAL-2808 update spike to latest (filter range, Present...	commit \| commitdiff \| tree
2017-11-22	gmungoc	JAL-2069 spike updated with latest (FeatureTypeSettings)	commit \| commitdiff \| tree
2017-11-15	gmungoc	JAL-2835 spike updated with latest	commit \| commitdiff \| tree
2017-11-08	gmungoc	JAL-2069 updated spike to latest	commit \| commitdiff \| tree
2017-11-07	gmungoc	JAL-2069 update spike to latest (no value colour options)	commit \| commitdiff \| tree
2017-11-07	gmungoc	JAL-2069 update spike with latest	commit \| commitdiff \| tree
2017-11-07	gmungoc	JAL-2069 update spike branch with latest	commit \| commitdiff \| tree
2017-11-02	gmungoc	JAL-2808 spike updated with latest	commit \| commitdiff \| tree
2017-10-27	gmungoc	JAL-2754 rename proguard.jar on spike branch	commit \| commitdiff \| tree
2017-10-27	gmungoc	JAL-2754 spike branch updated to latest	commit \| commitdiff \| tree
2017-10-27	gmungoc	JAL-2754 5.3.3 update of proguard.jar	commit \| commitdiff \| tree
2017-10-27	gmungoc	JAL-1793 spike branch updated to latest	commit \| commitdiff \| tree
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	commit \| commitdiff \| tree
2017-10-20	gmungoc	Push 1793 latest to spike branch	commit \| commitdiff \| tree
2017-10-05	gmungoc	JAL-2738 update spikes/mungo	commit \| commitdiff \| tree
2017-10-04	gmungoc	Merge branch 'features/JAL-1793VCF' into spikes/mungo	commit \| commitdiff \| tree
2017-10-04	gmungoc	JAL-2738 fix bug of premature exit from adding attributes	commit \| commitdiff \| tree
2017-10-04	gmungoc	JAL-2738 match consequence "Allele" to VCF allele;...	commit \| commitdiff \| tree
2017-10-04	gmungoc	JAL-2744 handle null features list	commit \| commitdiff \| tree
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	commit \| commitdiff \| tree
2017-10-03	gmungoc	JAL-2738 update test for threaded VCFLoader	commit \| commitdiff \| tree
2017-10-03	gmungoc	JAL-2738 code formatting	commit \| commitdiff \| tree
2017-10-02	gmungoc	JAL-2738 code tidy up, null checks &c	commit \| commitdiff \| tree
2017-10-02	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	commit \| commitdiff \| tree
2017-10-02	gmungoc	JAL-2525 lookup transcript features by Ontology	commit \| commitdiff \| tree
2017-10-02	gmungoc	JAL-2738 filter VEP consequence data to that for current...	commit \| commitdiff \| tree
2017-09-29	gmungoc	JAL-2738 one sequence feature per (SNP) VCF allele	commit \| commitdiff \| tree
2017-09-29	gmungoc	JAL-2744 indent CSQ lines to catch the eye	commit \| commitdiff \| tree
2017-09-28	gmungoc	JAL-2745 update www.ebi.ac.uk to https	commit \| commitdiff \| tree
2017-09-28	gmungoc	JAL-2738 separate thread to load VCF; update FeatureSettings...	commit \| commitdiff \| tree
2017-09-28	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	commit \| commitdiff \| tree
2017-09-28	gmungoc	JAL-2036 set menus after fully loading AlignFrame	commit \| commitdiff \| tree
2017-09-28	gmungoc	JAL-1796 GeneLociI as distinguished DBRefEntry	commit \| commitdiff \| tree
2017-09-28	gmungoc	JAL-2744 simple Feature Details report from Popup menu	commit \| commitdiff \| tree
2017-09-28	gmungoc	JAL-2744 refactor PopupMenu constructor to enable adding...	commit \| commitdiff \| tree
2017-09-26	gmungoc	JAL-2738 transfer VCF variant features to CDS sequences	commit \| commitdiff \| tree
2017-09-26	gmungoc	JAL-2738 JAL-2154 add DBRef from transcript to synthesized...	commit \| commitdiff \| tree
2017-09-26	gmungoc	JAL-2738 unit test for reverse strand gene	commit \| commitdiff \| tree
2017-09-26	gmungoc	JAL-2738 promote setGeneLoci to SequenceI!	commit \| commitdiff \| tree
2017-09-25	gmungoc	JAL-2738 use complement base for a VCF variant on reverse...	commit \| commitdiff \| tree
2017-09-25	gmungoc	JAL-2738 getGeneLoci promoted to SequenceI	commit \| commitdiff \| tree
2017-09-25	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	commit \| commitdiff \| tree
2017-09-25	gmungoc	JAL-2525 return no features if none matches ontology...	commit \| commitdiff \| tree
2017-09-25	gmungoc	JAL-2738 query unindexed file, unit test for VCFLoader	commit \| commitdiff \| tree
2017-09-25	gmungoc	JAL-2738 one constant in codebase for "alleles" attribute of	commit \| commitdiff \| tree
2017-09-25	gmungoc	JAL-2738 extract SNP variants from SNP or MIXED variant...	commit \| commitdiff \| tree
2017-09-22	gmungoc	JAL-2738 extract utility method to MappingUtils	commit \| commitdiff \| tree
2017-09-22	gmungoc	JAL-2738 correct handling of reverse strand genes	commit \| commitdiff \| tree
2017-09-22	gmungoc	JAL-2738 lookup GRCh38/37 gene mapping	commit \| commitdiff \| tree
2017-09-21	gmungoc	JAL-2738 compute VCF on peptide, extract AF (allele...	commit \| commitdiff \| tree
2017-09-21	gmungoc	JAL-2738 add chromosome coordinate mappings to transcripts	commit \| commitdiff \| tree
2017-09-21	gmungoc	JAL-2738 PoC of Load VCF file on to gene sequence	commit \| commitdiff \| tree
2017-09-21	gmungoc	JAL-2738 GeneLoci holds mapping of sequence to chromosome	commit \| commitdiff \| tree
2017-09-19	gmungoc	JAL-1793 wrapper for plain or indexed VCF + simple...	commit \| commitdiff \| tree
2017-09-19	gmungoc	JAL-1793 simple tests of reading raw and indexed VCF...	commit \| commitdiff \| tree
2017-09-18	gmungoc	Merge remote-tracking branch 'origin/patch/JAL-2732...	commit \| commitdiff \| tree
2017-09-18	gmungoc	JAL-2728 fine tuned initial split of split frame view	commit \| commitdiff \| tree
2017-09-15	gmungoc	JAL-2728 use right denominator for min/max ratio calculations	commit \| commitdiff \| tree
2017-09-15	gmungoc	JAL-2728 limit divider to ensure seqs visible (wip!)	commit \| commitdiff \| tree
2017-09-15	gmungoc	JAL-741 add tooltip to feature group checkbox	commit \| commitdiff \| tree
2017-09-12	gmungoc	Merge branch 'bug/JAL-2721fastPaintNPE' into develop	commit \| commitdiff \| tree
2017-09-07	gmungoc	JAL-2511 invalidate scale panel holder on font change...	commit \| commitdiff \| tree
2017-09-06	gmungoc	JAL-2721 no fastPaint if img has been nulled by fontChanged!	commit \| commitdiff \| tree
2017-09-06	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-2722'...	commit \| commitdiff \| tree
2017-09-05	gmungoc	JAL-2665 check for null selection group image	commit \| commitdiff \| tree
2017-09-05	gmungoc	JAL-2665 check for null selection group image	commit \| commitdiff \| tree
2017-08-31	gmungoc	JAL-2704 unit test for Above PID gap colour, simplified...	commit \| commitdiff \| tree
2017-08-30	gmungoc	JAL-2704 don't shade gap colour for PID/conservation	commit \| commitdiff \| tree
2017-08-25	gmungoc	JAL-2480 suppress debug timing output that got left in	commit \| commitdiff \| tree
2017-08-23	gmungoc	JAL-2435 last lost commit e926a5d redone	commit \| commitdiff \| tree
2017-08-23	gmungoc	JAL-2435 last lost commit e926a5d redone	commit \| commitdiff \| tree
2017-08-23	gmungoc	JAL-2481 a smidgin more test coverage of findFeatures	commit \| commitdiff \| tree
2017-08-22	gmungoc	JAL-2680 remove all mappings in test teardown	commit \| commitdiff \| tree
2017-08-22	gmungoc	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2017-08-21	gmungoc	JAL-2680 clear down all mappings before test	commit \| commitdiff \| tree
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	commit \| commitdiff \| tree
2017-08-10	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	commit \| commitdiff \| tree
2017-08-10	gmungoc	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2017-08-10	gmungoc	JAL-2660 used saved value of ignoreGapsInConsensus...	commit \| commitdiff \| tree
2017-08-10	gmungoc	JAL-2505 apply changed description to new, not deleted...	commit \| commitdiff \| tree
2017-08-10	gmungoc	JAL-2658 ensure features dropdown entries are unique	commit \| commitdiff \| tree
2017-08-10	gmungoc	JAL-2593 don't filter out 'colour by label' features	commit \| commitdiff \| tree
2017-08-10	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	commit \| commitdiff \| tree
next

RSS Atom