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JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
jalview
/
analysis
/
Dna.java
2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
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commitdiff
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
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diff to current
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
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2019-01-26
hansonr
Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
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2018-03-16
gmungoc
JAL-2620 alternative genetic code translation tables
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2018-03-07
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
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2018-01-30
gmungoc
JAL-1793 update spike build to latest incl stop and...
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2018-01-30
gmungoc
JAL-2898 show 'stop_gained' variants on peptide sequences
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2017-10-04
gmungoc
JAL-2738 match consequence "Allele" to VCF allele;...
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2017-10-03
kiramt
JAL-2674 testing
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2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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2017-09-29
kiramt
JAL-2674 finish with iterators for now
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2017-09-28
kiramt
JAL-2647 more iterators
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2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
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2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-06-09
gmungoc
JAL-2446 merged to spike branch
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2017-05-25
gmungoc
JAL-2557 removal of Sequence.sequenceFeatures
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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2016-10-05
Jim Procter
JAL-2189 source formatting
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2016-07-19
gmungoc
JAL-391 corrected handling of gapped sequences
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2016-06-19
Jim Procter
JAL-2110 JAL-2131 JAL-1765 remove reference to jalview...
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2016-01-28
gmungoc
Merge branch 'develop' into JAL-1705_trialMerge
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2015-12-22
gmungoc
JAL-391 new Calculate options to Reverse, Reverse Compl...
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-15
tcofoegbu
JAL-1479 refactored SequenceI interface - changed getDB...
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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2015-09-07
gmungoc
JAL-1636 translate stop codon as '*', mouseover * as...
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2015-03-30
gmungoc
JAL-1264 remove broken applet build dependencies
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
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2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-06-06
Jim Procter
JAL-1517 source formatting
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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2013-06-17
Jim Procter
JAL-1035 option to allow 'STOP' codon to translate...
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2013-06-17
Jim Procter
JAL-1312 rewrite of code for first reported exception...
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2013-06-17
Jim Procter
JAL-1318 - route warnings to stderr (need to find a...
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2013-06-17
Jim Procter
JAL-1318 avoid failure if SequenceI objects don't have...
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2013-06-17
Jim Procter
JAL-966 avoid using java.util.Vector
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diff to current
2012-11-08
jprocter
tidy imports
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2012-10-22
jprocter
Jalview 2.8 Source Header
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2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-09-27
jprocter
apply version 2.7 copyright
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2010-09-23
jprocter
apply jalview code style
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2010-09-23
jprocter
Jalview 2.6 source licence
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2010-04-30
jprocter
jalview 2.5 release banner
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2009-06-24
jprocter
take the average of the three consecutive codon sites...
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2009-06-08
jprocter
apply gpl development license
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2008-11-12
jprocter
minor translation bug
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2008-09-04
jprocter
merge from 2_4_Release branch
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2007-12-21
jprocter
further bugfix and annotation transfer for dna/protein...
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2007-07-13
jprocter
bugfixes, partially working code for translation using...
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2007-06-17
jprocter
fix aligned DNA codon translation bug(s) and generate...
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2007-05-22
jprocter
fixed jalview 2.3 bug where gapped aligned codons were...
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2007-04-25
jprocter
AlignmentAnnotation: added annotation score attribute...
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2007-03-19
jprocter
translate aligned cDNA to aligned peptide
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diff to current