JAL-1260 rudimentary parsing of LOCUS line to at least get accession id
[jalview.git] / src / jalview / api /
2016-02-12 gmungocJAL-2008 avoid unnecessary repaints; signatures changed...
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge
2015-12-22 gmungocJAL-653 set showSequenceFeatures=true on loading a...
2015-11-16 tcofoegbuJAL-1967 JAL-1479 refactored sequence<->structure mappi...
2015-11-05 tcofoegbuJAL-1479 SiftClient house keeping
2015-10-28 tcofoegbuJAL-1479 added support for SIFTs mapping output viewing...
2015-10-22 tcofoegbuJAL-1479 added basic support for SIFTs mapping - more...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-15 tcofoegbuJAL-1479 refactored SequenceI interface - changed getDB...
2015-10-14 tcofoegbuJAL-1926 created interface for DBRefEntry
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-10-05 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-28 tcofoegbuJAL-1896 revised implementation to construct a ColourSc...
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-09-03 tcofoegbuJAL-793 use default custom export settings for html...
2015-08-11 tcofoegbuadd ability to launch jalview from exported html +...
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring
2015-06-26 tcofoegbuJAL-1780 improvement to ensure export settings dialog...
2015-06-18 Jim ProcterJAL-653 JAL-1780 javadoc for FeatureRenderer prior...
2015-06-18 Jim ProcterJAL-1780 JAL-653 moved AlignExportSettings reference...
2015-06-17 Jim ProcterMerge branch 'features/JAL-653_gffalignments' into...
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments
2015-06-17 tcofoegbuJAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile
2015-06-17 tcofoegbuJAL-1780 Export settings for flatfile output
2015-06-15 tcofoegbuJAL-1641 clean up
2015-06-15 tcofoegbuJAL-1641 docs for ComplexAlignFile interface
2015-06-12 tcofoegbuJAL-1641 refactor
2015-06-10 tcofoegbuJAL-1641 updated applet version
2015-06-05 tcofoegbuJAL-1760 JAL-1641 Serialisation of Hidden Seqs and...
2015-06-05 Jim ProcterJAL-1482 JAL-653 refactor feature file import code...
2015-06-05 Jim ProcterJAL-1482 refactor setTableData to more sensible name...
2015-06-01 tcofoegbuJAL-1641 remove all refs/imports from gui package
2015-05-19 tcofoegbuJAL-1641 Further refactoring of JSON export option...
2015-04-28 gmungocJAL-1684 removed reflection from ViewStyle (to Junit...
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5...
2015-04-02 gmungocJAL-1690 'scale protein as cDNA' options in Preferences...
2015-03-30 gmungocJAL-1596 refactoring to allow unit tests to start and...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-01-26 gmungocMerge branch 'features/JAL-1588saveChimeraSession'...
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method
2015-01-23 Jim ProcterJAL-969 javadoc and mark interface overrides for clarity
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour...
2015-01-20 Charles Ofoegbuclean up
2015-01-20 Charles Ofoegbuclean up
2015-01-20 Charles Ofoegbubasic house keeping
2015-01-13 Charles OfoegbuMerge branch 'features/JAL-1553_select-columns-by-annot...
2015-01-13 Charles OfoegbuRefactored AnnotationColumnChoser and AnnotationColorCh...
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29...
2015-01-07 Jim ProcterMerge branch 'develop' into JAL-1483_29dev
2015-01-06 gmungocJAL-1588 refactoring prior to 'save Chimera project'
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now...
2014-11-27 Jim ProcterJAL-966 promote getName to an api method
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc
2014-09-12 j.procter@dundee... JAL-1486 JAL-535 refactor code for trimming alignment...
2014-09-12 j.procter@dundee... JAL-535 tidy interface definition and documentation
2014-08-08 j.procter@dundee... formatting/typo
2014-08-08 j.procter@dundee... JAL-1483 move show sequence feature and sequence featur...
2014-08-08 j.procter@dundee... JAL-1483 sort by feature score/density made first class...
2014-08-08 j.procter@dundee... JAL-1483 JAL-1104 method to pass operations for undo...
2014-08-08 j.procter@dundee... JAL-1483 abstract feature renderer model holds render...
2014-08-08 j.procter@dundee... JAL-1483 model and api for feature display list on...
2014-08-08 j.procter@dundee... JAL-1482 nascent feature settings model and controller...
2014-07-04 j.procter@dundee... JAL-1333 more abstraction and refactoring and working...
2014-07-02 Jim Procterformatting
2014-07-02 Jim ProcterJAL-1333 JAL-1527 refactors to create core structure...
2014-06-13 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
2014-06-06 Jim ProcterJAL-1517 source formatting
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-23 Jim ProcterJAL-1445 extend functionality to select or toggle selec...
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-05-02 Jim ProcterMerge branch 'Release_2_8_1_Branch' into JAL-1372_refer...
2014-05-01 Jim ProcterJAL-961 store result of conservation analysis worker...
2014-04-21 Jim ProcterJAL-1483 interface to allow score model to be parameter...
2014-04-21 Jim ProcterJAL-967 JAL-1482 new feature renderer api - needs more...
2014-04-21 Jim ProcterJAL-1473 refactor score matrices and tree score calcula...
2014-02-17 Jim ProcterJAL-1445 ported routine for selecting containing/non...
2014-02-17 Jim ProcterJAL-1445 expose columnSelection setter.
2014-02-17 Jim ProcterJAL-535 interface for GUI state update methods that...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-10-11 Jim ProcterJAL-1385 expose core view model methods in interface
2013-10-07 Jim ProcterJAL-1385 JAL-535 refactor sequence colour settings...
2013-10-07 Jim ProcterJAL-1385 expose core view model methods in interface
2013-10-07 Jim ProcterJAL-1385 Alignment view controller logic implementation...
2013-08-30 Jim ProcterJAL-1370 JAL-1371 flags for display and colour of view...
2012-11-08 jproctertidy imports
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated...
2012-08-29 jprocterJAL-1155 fix panel length calculation for grouped graph...
2012-08-28 jprocterremove contaminant imports
2012-06-19 jprocterJAL-961 JAL-975 extend api to support removal of worker...
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel.
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