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JAL-4059 fix that boolean for non-value query string args
[jalview.git]
/
src
/
jalview
/
appletgui
/
AppletJmol.java
2023-08-10
Ben Soares
JAL-629 Change all stdout and stderr output to use...
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commitdiff
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
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commitdiff
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diff to current
2020-07-07
gmungoc
JAL-1424 streamlined message checker, corrected applet...
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commitdiff
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diff to current
2020-05-19
gmungoc
Merge branch 'develop' into feature/JAL-3551Pymol
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commitdiff
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diff to current
2020-05-15
gmungoc
JAL-3551 pull up Close Viewer dialog to base class
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commitdiff
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diff to current
2020-02-20
gmungoc
JAL-2422 pull-up refactoring of structure commands...
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commitdiff
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diff to current
2020-02-04
gmungoc
JAL-2422 pull up refactoring in preparation for Chimera...
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commitdiff
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diff to current
2018-08-21
hansonr
mc_view references were MCview
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commitdiff
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diff to current
2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
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commitdiff
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diff to current
2017-10-10
Jim Procter
Merge branch 'codereviews/JAL-1990_IProgressIndicator_j...
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commitdiff
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diff to current
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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commitdiff
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diff to current
2017-08-16
Jim Procter
JAL-2418 source formatting
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commitdiff
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diff to current
2017-06-09
gmungoc
JAL-2446 merged to spike branch
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commitdiff
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diff to current
2016-12-22
gmungoc
JAL-2360 structure viewers now using ColourMenuHelper...
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commitdiff
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diff to current
2016-12-20
gmungoc
JAL-2360 ColourSchemes holds configured schemes, AlignF...
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commitdiff
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diff to current
2016-11-25
gmungoc
Merge branch 'develop' into trialMerge
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commitdiff
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diff to current
2016-11-10
tcofoegbu
Bugfix to enable accurate chain extraction/association...
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commitdiff
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diff to current
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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commitdiff
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diff to current
2016-10-24
Jim Procter
Merge branch 'releases/Release_2_10_0_Branch'
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commitdiff
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diff to current
2016-10-14
gmungoc
Merge branch 'releases/Release_2_10_Branch' into task...
task/JAL-2196pdbeProperties
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commitdiff
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diff to current
2016-10-11
gmungoc
JAL-2233 reverted changes to Jmol logging levels
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commitdiff
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diff to current
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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commitdiff
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diff to current
2016-10-05
gmungoc
Merge branch 'develop' into task/JAL-2196pdbeProperties
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commitdiff
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diff to current
2016-09-27
gmungoc
JAL-2233 less verbose logging for Jmol
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commitdiff
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diff to current
2016-09-13
gmungoc
JAL-2196 refactor PDBEntry.getProperty,setProperty...
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commitdiff
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diff to current
2016-07-11
gmungoc
file format enum wip changes
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commitdiff
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diff to current
2016-03-22
tcofoegbu
JAL-1919 code improvement to make PDB sequence fetcher...
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commitdiff
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diff to current
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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commitdiff
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diff to current
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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commitdiff
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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commitdiff
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diff to current
2015-08-26
gmungoc
JAL-1759 added check for null (console 'history')
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commitdiff
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diff to current
2015-06-30
gmungoc
JAL-1759 unused JmolPopup removed, code tidy for generics
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commitdiff
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diff to current
2015-06-26
gmungoc
JAL-1759 changed to non-deprecated Viewer.renderScreenI...
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commitdiff
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diff to current
2015-06-04
gmungoc
JAL-1750 View Mapping scoped to that viewer's mappings...
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commitdiff
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diff to current
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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commitdiff
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diff to current
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
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commitdiff
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diff to current
2015-01-26
gmungoc
Merge branch 'features/JAL-1588saveChimeraSession'...
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commitdiff
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diff to current
2015-01-06
gmungoc
JAL-1588 refactoring prior to 'save Chimera project'
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commitdiff
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diff to current
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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commitdiff
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diff to current
2014-11-14
Jim Procter
Merge branch 'develop' into JAL-1483_featureBasedTreeCalc
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commitdiff
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diff to current
2014-09-23
darolmar
JAL-1355
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commitdiff
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diff to current
2014-08-08
j.procter@dundee...
JAL-1483 move show sequence feature and sequence featur...
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commitdiff
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diff to current
2014-07-02
Jim Procter
JAL-1333 JAL-1527 refactors to create core structure...
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 source formatting
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commitdiff
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diff to current
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
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diff to current
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
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diff to current
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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commitdiff
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diff to current
2014-02-03
Jim Procter
Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
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commitdiff
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diff to current
2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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commitdiff
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diff to current
2013-08-29
darolmar
i18n
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commitdiff
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diff to current
2012-11-08
jprocter
tidy imports
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commitdiff
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diff to current
2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
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diff to current
2012-10-03
jprocter
formatting
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commitdiff
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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commitdiff
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diff to current
2011-10-04
jprocter
Merge remote-tracking branch 'remotes/origin/2_5_1_rna_...
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commitdiff
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diff to current
2011-09-27
jprocter
apply version 2.7 copyright
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commitdiff
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diff to current
2011-07-25
janengelhardt
Start merging of Laurens Code
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commitdiff
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diff to current
2011-05-17
jprocter
refactor to allow distinct StructureSelectionManager...
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commitdiff
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diff to current
2011-04-25
jprocter
JAL-824 - ensure Jmol colouring is a radio button
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commitdiff
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diff to current
2011-04-22
jprocter
option for enabling Jmol colouring mode JAL-824
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commitdiff
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diff to current
2011-02-18
jprocter
call to release any explicit event handler references
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commitdiff
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diff to current
2010-09-23
jprocter
apply jalview code style
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commitdiff
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diff to current
2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
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diff to current
2010-09-14
jprocter
streamlined app and applet jmol console + event handlin...
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commitdiff
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diff to current
2010-08-31
jprocter
notes re JAL-623 and JAL-583, new api methods for addin...
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commitdiff
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diff to current
2010-08-27
jprocter
revised sequence/structure binding so one structure...
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commitdiff
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diff to current
2010-08-25
jprocter
correct initing of JmolViewer to avoid security excepti...
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commitdiff
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diff to current
2010-08-20
jprocter
complete the sequence-structure mapping details. *...
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commitdiff
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diff to current
2010-08-20
jprocter
improved debug output when Jmol viewer creation fails
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commitdiff
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diff to current
2010-08-18
jprocter
refactor to abstract jmol/jalview binding and applet...
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commitdiff
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diff to current
2010-06-29
jprocter
upgrading structure/sequence binding so that a structur...
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commitdiff
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diff to current
2010-06-17
jprocter
remove source annotations
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commitdiff
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diff to current
2010-06-17
jprocter
update to Jmol series 12 (JAL-582)
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commitdiff
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diff to current
2010-04-30
jprocter
jalview 2.5 release banner
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commitdiff
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diff to current
2009-11-06
jprocter
better formed generic select residue X expression
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commitdiff
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diff to current
2009-10-30
jprocter
na pdb: highlight any part of a residue, not just the...
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commitdiff
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diff to current
2009-06-08
jprocter
apply gpl development license
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commitdiff
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diff to current
2008-09-04
jprocter
merge from 2_4_Release branch
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commitdiff
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diff to current
2008-04-10
jprocter
bug fix for Features/Annotations file parameter parsing...
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commitdiff
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diff to current
2007-12-18
jprocter
incorrect colour-by-sequence when gaps are present...
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commitdiff
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diff to current
2007-10-27
jprocter
enabled platform dependent embedding of menuBar with...
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commitdiff
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diff to current
2007-05-22
amwaterhouse
DONT SET PICKING LABEL
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commitdiff
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diff to current
2007-05-08
amwaterhouse
set picking label
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commitdiff
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diff to current
2007-05-08
amwaterhouse
instant update when seq colour is pressed
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commitdiff
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diff to current
2007-05-08
amwaterhouse
must specify .CA
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commitdiff
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diff to current
2007-05-08
amwaterhouse
small sphere for alpha carbon
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commitdiff
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diff to current
2007-05-07
amwaterhouse
Dont use gold colouring for highlight
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commitdiff
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diff to current
2007-05-04
amwaterhouse
lastCommand check
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commitdiff
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diff to current
2007-05-03
amwaterhouse
optimize repaints
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commitdiff
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diff to current
2007-05-01
amwaterhouse
use jalviewLite to addFrame
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commitdiff
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diff to current
2007-05-01
amwaterhouse
Can specify PDB chain to map sequence to - only used...
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commitdiff
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diff to current
2007-04-27
amwaterhouse
Make sure sequence is in mouse over alignment
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commitdiff
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diff to current
2007-04-23
amwaterhouse
getColour method added
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commitdiff
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diff to current
2007-04-17
amwaterhouse
Applet remembers PDBEntries, can launch multiple struct...
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commitdiff
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diff to current
2007-04-17
amwaterhouse
Remove system.out
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commitdiff
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diff to current
2007-04-11
amwaterhouse
Amend features/annotations in applet
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commitdiff
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diff to current
2007-04-02
jprocter
featuresAdded method introduced for consistency with...
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commitdiff
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diff to current
2007-03-26
amwaterhouse
Jalview colour schemes added
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commitdiff
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diff to current
2007-03-23
amwaterhouse
updates to console
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commitdiff
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diff to current
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