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[jalview.git] / src / jalview / appletgui / FeatureRenderer.java

2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-06-30	gmungoc	JAL-2505 correct handling of change of feature type	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-05-30	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-05-30	gmungoc	JAL-2547 tooltip/AmendFeatures on gap straddled by...	blob \| commitdiff \| diff to current
2017-05-25	gmungoc	JAL-2050 make SequenceFeature.score final, adjust const...	blob \| commitdiff \| diff to current
2017-05-22	gmungoc	JAL-2505 updates after conflicting merge of JAL-2504	blob \| commitdiff \| diff to current
2017-05-22	gmungoc	JAL-2504 update the right feature colour when creating... bug/JAL-2510amendFeatures	blob \| commitdiff \| diff to current
2017-05-17	gmungoc	JAL-2504 use (and update) defaults for new feature...	blob \| commitdiff \| diff to current
2017-05-05	gmungoc	JAL-964 JAL-2510 update Feature Settings from Amend...	blob \| commitdiff \| diff to current
2017-05-04	gmungoc	JAL-2504 allow feature type to be specified for Create...	blob \| commitdiff \| diff to current
2017-03-21	gmungoc	JAL-2438 removed (non-functional) lastSeq, lastSequence...	blob \| commitdiff \| diff to current
2016-12-16	gmungoc	JAL-2360 refactoring for JalviewColourScheme enum,	blob \| commitdiff \| diff to current
2016-10-28	Jim Procter	JAL-966 JAL-1738 JAL-345 interfaces for SearchResults...	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-08-24	gmungoc	JAL-1424 removed unused and duplicated message keys	blob \| commitdiff \| diff to current
2016-07-18	Jim Procter	Merge branch 'features/JAL-2068groovyAnnotationWorker...	blob \| commitdiff \| diff to current
2016-06-20	Jim Procter	Merge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker	blob \| commitdiff \| diff to current
2016-05-10	gmungoc	Merge branch 'develop' into features/JAL-1956_featureStyles	blob \| commitdiff \| diff to current
2016-05-09	gmungoc	JAL-2018 export graduated feature colours correctly	blob \| commitdiff \| diff to current
2016-05-04	gmungoc	JAL-2090 removed test for Java > 1.1 to enable transparency	blob \| commitdiff \| diff to current
2016-05-03	gmungoc	JAL-2068 minimised jalview.gui imports, test for remove...	blob \| commitdiff \| diff to current
2016-02-24	gmungoc	JAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles	blob \| commitdiff \| diff to current
2015-11-21	gmungoc	JAL-1968 remove feature links	blob \| commitdiff \| diff to current
2015-11-21	gmungoc	JAL-653 JAL-1968 FeaturesFile now handles Jalview or...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 source formatting and organise imports	blob \| commitdiff \| diff to current
2015-05-18	gmungoc	JAL-1663 apply new colour correctly; source formatting	blob \| commitdiff \| diff to current
2015-04-08	gmungoc	JAL-1691 applet SplitFrame scrolling; pull up of 5...	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	JAL-1683 replace year/version strings with tokens in...	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...	blob \| commitdiff \| diff to current
2014-12-15	Jim Procter	JAL-1620 version bump and release notes	blob \| commitdiff \| diff to current
2014-11-14	Jim Procter	Merge branch 'develop' into JAL-1483_featureBasedTreeCalc	blob \| commitdiff \| diff to current
2014-09-26	darolmar	JAL-1355	blob \| commitdiff \| diff to current
2014-09-23	darolmar	JAL-1355	blob \| commitdiff \| diff to current
2014-08-08	j.procter@dundee...	JAL-1482 feature renderer and manipulation code refacto...	blob \| commitdiff \| diff to current
2014-06-13	Jim Procter	Merge branch 'Release_2_8_2_Branch' into JAL-1483_featu...	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 fix copyright for 2.8.2	blob \| commitdiff \| diff to current
2014-06-05	Jim Procter	JAL-1517 update copyright to version 2.8.2	blob \| commitdiff \| diff to current
2014-05-22	Jim Procter	JAL-1503 update version in GPL header	blob \| commitdiff \| diff to current
2014-04-21	Jim Procter	JAL-967 JAL-1482 new feature renderer api - needs more...	blob \| commitdiff \| diff to current
2014-02-03	Jim Procter	Merge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge	blob \| commitdiff \| diff to current
2014-01-29	Jim Procter	JAL-1432 updated copyright notices	blob \| commitdiff \| diff to current
2013-08-29	darolmar	i18n	blob \| commitdiff \| diff to current
2013-08-14	Jim Procter	JAL-1354 replacement of bare strings in GUI dialogs...	blob \| commitdiff \| diff to current
2012-11-08	jprocter	tidy imports	blob \| commitdiff \| diff to current
2012-10-22	jprocter	Jalview 2.8 Source Header	blob \| commitdiff \| diff to current
2012-10-03	jprocter	formatting	blob \| commitdiff \| diff to current
2011-10-27	jprocter	(JAL-969) refactored alignmentViewport base class to...	blob \| commitdiff \| diff to current
2011-10-21	jprocter	Merge branch 'Release_2_7_Branch_hotfix_JAL-962' into...	blob \| commitdiff \| diff to current
2011-10-21	jprocter	(JAL-962) allow group visibility to be specified before...	blob \| commitdiff \| diff to current
2011-10-10	jprocter	update author list in license for (JAL-826)	blob \| commitdiff \| diff to current
2011-09-27	jprocter	apply version 2.7 copyright	blob \| commitdiff \| diff to current
2010-11-12	jprocter	patch for JAL-682 - copy over current display settings...	blob \| commitdiff \| diff to current
2010-09-23	jprocter	apply jalview code style	blob \| commitdiff \| diff to current
2010-09-23	jprocter	Jalview 2.6 source licence	blob \| commitdiff \| diff to current
2010-08-18	jprocter	refactor to jalview.api methods	blob \| commitdiff \| diff to current
2010-04-30	jprocter	jalview 2.5 release banner	blob \| commitdiff \| diff to current
2010-04-23	jprocter	1.1 compatibility and refresh table method	blob \| commitdiff \| diff to current
2010-04-16	jprocter	graduated feature color editing	blob \| commitdiff \| diff to current
2009-06-08	jprocter	apply gpl development license	blob \| commitdiff \| diff to current
2009-06-01	jprocter	maxcolour is default colour for no-score features	blob \| commitdiff \| diff to current
2009-03-31	jprocter	added feature gradient colours and sortby feature score...	blob \| commitdiff \| diff to current
2008-09-04	jprocter	merge from 2_4_Release branch	blob \| commitdiff \| diff to current
2007-10-10	jprocter	featureGroup show/hide and newView methods for applet...	blob \| commitdiff \| diff to current
2007-04-30	amwaterhouse	setVisible replaces show	blob \| commitdiff \| diff to current
2007-04-27	amwaterhouse	Repaint after feature added	blob \| commitdiff \| diff to current
2007-04-27	amwaterhouse	Place new feature on top of existing features	blob \| commitdiff \| diff to current
2007-04-16	amwaterhouse	drawSequence must be synchronized	blob \| commitdiff \| diff to current
2007-04-11	amwaterhouse	Amend features/annotations in applet	blob \| commitdiff \| diff to current
2007-04-02	jprocter	featuresAdded method introduced for consistency with...	blob \| commitdiff \| diff to current
2007-03-26	jprocter	fix single sequence features added rendering bug.	blob \| commitdiff \| diff to current
2007-02-27	amwaterhouse	Uncomment graphics 2d bit	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2006-12-05	amwaterhouse	sequence is char []	blob \| commitdiff \| diff to current
2006-11-23	amwaterhouse	Transparency......	blob \| commitdiff \| diff to current
2006-11-22	amwaterhouse	applet has multiple views	blob \| commitdiff \| diff to current
2006-11-21	amwaterhouse	Transparency available again	blob \| commitdiff \| diff to current
2006-10-24	amwaterhouse	Commented out for compilation	blob \| commitdiff \| diff to current
2006-08-22	amwaterhouse	Put transparency back	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-09	amwaterhouse	Transparency	blob \| commitdiff \| diff to current
2006-08-08	amwaterhouse	Applet has hidden regions	blob \| commitdiff \| diff to current
2006-07-28	amwaterhouse	If colour hasnt been created, make a new one	blob \| commitdiff \| diff to current
2006-07-28	amwaterhouse	Add transparency	blob \| commitdiff \| diff to current
2006-07-12	amwaterhouse	sequences are private in SequenceGroup	blob \| commitdiff \| diff to current
2006-06-23	amwaterhouse	Parse HTML links from jalview features file	blob \| commitdiff \| diff to current
2006-06-07	amwaterhouse	Tooltips for features, links for features added	blob \| commitdiff \| diff to current
2006-05-02	amwaterhouse	Middle mouse to compress alignment	blob \| commitdiff \| diff to current
2006-03-24	amwaterhouse	Feature settings Root_VamJalview_2_07b+	blob \| commitdiff \| diff to current
2006-03-24	amwaterhouse	-1 +1 check removed	blob \| commitdiff \| diff to current
2006-03-16	amwaterhouse	Feature rendering in groups	blob \| commitdiff \| diff to current
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