| 2017-07-24 |
gmungoc | JAL-2624 additional tests for FeatureColour.getColour(), |
tree | commitdiff |
| 2017-07-23 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
| 2017-06-27 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
| 2017-06-06 |
gmungoc | JAL-2589 correct colour for Gap in Score and User Defin... |
tree | commitdiff |
| 2017-06-02 |
gmungoc | JAL-2526 additional tests for findPosition with/without... |
tree | commitdiff |
| 2017-05-25 |
gmungoc | JAL-2050 make SequenceFeature.score final, adjust const... |
tree | commitdiff |
| 2017-05-24 |
gmungoc | JAL-2506 relocate Uniprot binding classes, bind to... |
tree | commitdiff |
| 2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
| 2017-03-30 |
gmungoc | JAL-2346 always run setup! bug/JAL-2346annotationChoice |
tree | commitdiff |
| 2017-03-30 |
gmungoc | JAL-2346 more test coverage for AnnotationColourGradient |
tree | commitdiff |
| 2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
| 2017-03-23 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
| 2017-03-15 |
gmungoc | JAL-2443 push getResidueBoxColour inside getResidueColour |
tree | commitdiff |
| 2017-02-21 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
| 2017-02-20 |
gmungoc | JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix... |
tree | commitdiff |
| 2017-02-20 |
Jim Procter | Merge branch 'features/JAL-2379pcaMemory' into develop |
tree | commitdiff |
| 2017-02-17 |
gmungoc | JAL-2416 scoreMatrices removed from ResidueProperties |
tree | commitdiff |
| 2017-02-14 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
| 2017-02-13 |
gmungoc | JAL-1632 first cut of Tree chooser dialog and ScoreMode... |
tree | commitdiff |
| 2017-02-09 |
gmungoc | JAL-2371 no test for lower case consensus as not expect... |
tree | commitdiff |
| 2017-02-09 |
gmungoc | Merge branch 'develop' into features/JAL-2379pcaMemory features/JAL-2379pcaMemory |
tree | commitdiff |
| 2017-02-07 |
gmungoc | JAL-2397 PCA gap cost uses last column of score matrix |
tree | commitdiff |
| 2017-02-06 |
gmungoc | JAL-2379 computePairwiseScores() moved to ScoreMatrix |
tree | commitdiff |
| 2017-02-03 |
gmungoc | JAL-2379 'direct' pairwise score calculation for PCA... |
tree | commitdiff |
| 2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueS... |
tree | commitdiff |
| 2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
tree | commitdiff |
| 2017-01-27 |
gmungoc | JAL-2371 CollectionColourScheme renamed ResidueShader... |
tree | commitdiff |
| 2017-01-27 |
gmungoc | JAL-2360 JAL-2371 updates from review CR-JAL-1 |
tree | commitdiff |
| 2017-01-09 |
gmungoc | JAL-2371 remove ColourSchemeI.findColour(c), pure inter... |
tree | commitdiff |
| 2017-01-05 |
gmungoc | JAL-2371 add test for toggling ignore gaps with PID... |
tree | commitdiff |
| 2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
tree | commitdiff |
| 2016-12-29 |
gmungoc | JAL-2630 first pass groovy colour scheme (with slight... |
tree | commitdiff |
| 2016-12-23 |
gmungoc | JAL-2360 removed UserDefinedColours.userColourSchemes |
tree | commitdiff |
| 2016-12-21 |
gmungoc | JAL-2360 simplified code to create a new colour scheme |
tree | commitdiff |
| 2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
tree | commitdiff |
| 2016-12-20 |
gmungoc | JAL-2360 testRegisterColourScheme to demonstrate a... |
tree | commitdiff |
| 2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
tree | commitdiff |
| 2016-12-19 |
gmungoc | JAL-2360 amended toAppletParameter() for reproducible... |
tree | commitdiff |
| 2016-12-16 |
gmungoc | JAL-2360 added UserColourScheme.toAppletParameter+test... |
tree | commitdiff |
| 2016-12-16 |
gmungoc | JAL-2360 getColour() renamed to getColourScheme(),... |
tree | commitdiff |
| 2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
tree | commitdiff |
| 2016-12-14 |
gmungoc | JAL-2360 test added |
tree | commitdiff |
| 2016-12-12 |
gmungoc | JAL-2362 return correct lower-case colour; Javadoc... |
tree | commitdiff |
| 2016-12-02 |
gmungoc | Unit tests added, minor refactoring |
tree | commitdiff |
| 2016-12-02 |
gmungoc | JAL-2346 unit test for annotation drop-down list builder |
tree | commitdiff |
| 2016-11-28 |
tcofoegbu | Merge branch 'features/JAL-2326_JOptionPane-refactoring... |
tree | commitdiff |
| 2016-11-24 |
tcofoegbu | JAL-2326 added setup method for JvOptionPane in all... features/JAL-2326_JOptionPane-refactoring |
tree | commitdiff |
| 2016-11-24 |
Jim Procter | JAL-2325 apply license to new source files |
tree | commitdiff |
| 2016-11-17 |
gmungoc | JAL-98 ProfilesI container for profiles for columns |
tree | commitdiff |
| 2016-11-08 |
gmungoc | JAL-2301 made T hydrophobic as per the cited conservati... |
tree | commitdiff |
| 2016-11-02 |
gmungoc | JAL-98 ProfileI interface for Profile |
tree | commitdiff |
| 2016-11-02 |
gmungoc | JAL-98 Profile and ResidueCount moved from analysis... |
tree | commitdiff |
| 2016-11-01 |
gmungoc | JAL-98 use Integer constants; tests added for propHash... |
tree | commitdiff |
| 2016-10-26 |
gmungoc | JAL-2286 javadoc, refactor, unit tests for threshold... |
tree | commitdiff |
| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
tree | commitdiff |
| 2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
tree | commitdiff |
| 2016-10-05 |
Jim Procter | JAL-2189 apply license |
tree | commitdiff |
| 2016-10-05 |
Jim Procter | JAL-2189 format tests |
tree | commitdiff |
| 2016-09-22 |
gmungoc | JAL-1421 typed ResidueProperties.propHash; JAL-2176... |
tree | commitdiff |
| 2016-06-23 |
Jim Procter | Merge branch 'develop' into merge_JAL-2110 |
tree | commitdiff |
| 2016-06-23 |
Jim Procter | JAL-1270 test group fix |
tree | commitdiff |
| 2016-06-22 |
gmungoc | JAL-2015 fixed bug in copy constructor and added tests |
tree | commitdiff |
| 2016-05-10 |
gmungoc | Merge branch 'develop' into features/JAL-1956_featureStyles |
tree | commitdiff |
| 2016-02-25 |
gmungoc | JAL-2015 parse/write Jalview feature format pushed... |
tree | commitdiff |
| 2016-02-24 |
gmungoc | JAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles |
tree | commitdiff |
| 2016-01-21 |
tcofoegbu | JAL-1479 JAL-1979 updated the modified-aminoacid triple... |
tree | commitdiff |
| 2015-10-16 |
Jim Procter | JAL-1925 update source version in license Release_2_9_0b2 |
tree | commitdiff |
| 2015-10-08 |
Jim Procter | JAL-1894 update year/version in copyright |
tree | commitdiff |
| 2015-09-10 |
Jim Procter | JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... |
tree | commitdiff |
| 2015-09-10 |
Jim Procter | JAL-1645 licencing for new files in test and utils |
tree | commitdiff |
| 2015-09-10 |
Jim Procter | JAL-1645 source formatting and organise imports |
tree | commitdiff |
| 2015-09-03 |
gmungoc | JAL-1828 lookup table to convert MSE to MET when parsin... |
tree | commitdiff |
| 2015-07-08 |
gmungoc | JAL-1759 merge from develop |
tree | commitdiff |
| 2015-07-07 |
tcofoegbu | JAL-1805 test envirionment separation |
tree | commitdiff |
| 2015-06-19 |
tcofoegbu | JAL-1270 test suits import order refactor features/JAL-1270_JUnit-to-TestNG features/JAL-1782_JUnit-to-TestNG |
tree | commitdiff |
| 2015-06-19 |
tcofoegbu | JAL-1270 JUnit to TestNG refactoring |
tree | commitdiff |
| 2015-05-20 |
gmungoc | JAL-1741 nucleotide-aware colour schemes applied to... |
tree | commitdiff |
| 2015-03-26 |
gmungoc | Merge develop to Release_2_8_3_Branch |
tree | commitdiff |
| 2015-03-06 |
Jim Procter | JAL-1683 replace year/version strings with tokens in... |
tree | commitdiff |
| 2014-12-15 |
Jim Procter | JAL-1620 version bump and release notes |
tree | commitdiff |
| 2014-06-06 |
Jim Procter | JAL-1517 source formatting |
tree | commitdiff |
| 2014-06-06 |
Jim Procter | JAL-1517 fix copyright for 2.8.2 |
tree | commitdiff |
| 2014-04-21 |
Jim Procter | JAL-1473 refactor score matrices and tree score calcula... |
tree | commitdiff |
| 2014-01-29 |
Jim Procter | JAL-1432 updated copyright notices |
tree | commitdiff |
| 2013-06-17 |
Jim Procter | JAL-1027 check that ResidueProperties.codonHash2 is... |
tree | commitdiff |
| 2013-06-17 |
Jim Procter | JAL-1312 remove unnecessary methods |
tree | commitdiff |
| 2013-06-17 |
Jim Procter | JAL-529 - IUBMB nucleotide ambiguity codes and programm... |
tree | commitdiff |
| 2012-10-22 |
jprocter | Jalview 2.8 Source Header |
tree | commitdiff |
| 2012-09-06 |
jprocter | JAL-1167 method and simple tests for printing score... |
tree | commitdiff |
|
git://source.jalview.org / jalview.git / history