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JAL-1712 fixes/tests for Castor binding and 'show flanking regions'
[jalview.git] / src / MCview /
2014-12-15 Jim ProcterJAL-1620 version bump and release notes tree | commitdiff
2014-11-27 Jim ProcterJAL-674 patch to fix bug with showing reference annotat... tree | commitdiff
2014-11-27 Jim ProcterJAL-674 formatting tree | commitdiff
2014-11-26 Jim ProcterJAL-674 employ the provided DNA/Protein matrix string... tree | commitdiff
2014-11-26 Jim ProcterJAL-674 disable addition of PDBRESNUM annotation line tree | commitdiff
2014-11-26 Jim ProcterJAL-674 nicer temperature factor labelling and include... tree | commitdiff
2014-11-18 Jim ProcterJAL-674 make temperature factor, local secondary struct... tree | commitdiff
2014-11-13 Jim ProcterMerge branch 'features/JAL-1469_svg-output-for-figure... tree | commitdiff
2014-11-12 Charles OfoegbuAdded support for SVG Export tree | commitdiff
2014-11-12 Jim ProcterJAL-674 switch from .transfer to .liftOver for transfer... tree | commitdiff
2014-10-31 Jim ProcterJAL-674 JAL-961 pass row reference to handler to check... tree | commitdiff
2014-10-30 Jim ProcterJAL-674 hang on to sequences created by secondary parsi... tree | commitdiff
2014-10-30 Jim ProcterJAL-1551 format and tidy tree | commitdiff
2014-10-21 Jim ProcterJAL-674 check for null vector before ... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 remove any spurious PDBEntrys generated by... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 methods and test for PDB derived annotation... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 store ID in MCview.PDBfile calcId string, not... tree | commitdiff
2014-10-21 Jim ProcterJAL-674 test for presence of annotation derived from... tree | commitdiff
2014-10-21 Jim ProcterJAL-1551 formatting tree | commitdiff
2014-10-21 Jim ProcterJAL-674 refactor method to match and transfer annotatio... tree | commitdiff
2014-10-21 Jim ProcterJAL-1551 formatting tree | commitdiff
2014-10-15 Jim ProcterJAL-674 support preservation of any annotation created... tree | commitdiff
2014-10-15 Jim ProcterJAL-674 make transferAnnotation method static tree | commitdiff
2014-10-10 Jim ProcterJAL-674 disable secondary structure annotation when... tree | commitdiff
2014-10-10 Jim ProcterJAL-674 typo tree | commitdiff
2014-10-10 Jim ProcterJAL-674 new constructors to pass flags about annotating... tree | commitdiff
2014-10-10 Jim ProcterJAL-674 parser flag to control secondary structure... tree | commitdiff
2014-10-06 Jim ProcterJAL-654_dssp formatting and javadoc tree | commitdiff
2014-09-26 darolmarJAL-1355 tree | commitdiff
2014-09-23 darolmarJAL-1355 tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch tree | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header tree | commitdiff
2014-02-18 Jim ProcterMerge branch 'JAL-1445' into develop tree | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1... tree | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge tree | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices tree | commitdiff
2013-12-25 darolmarJAL-1355 (basic i18n support) tree | commitdiff
2013-10-15 Jim Procterworkaround for JAL-1395 tree | commitdiff
2013-10-15 Jim ProcterJAL-1159 Merging 2.8.1 patches and Anne Menards work... tree | commitdiff
2013-10-14 Jim ProcterMerge branch 'develop' into dev_from_2_8_1 tree | commitdiff
2013-08-29 darolmari18n tree | commitdiff
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs... tree | commitdiff
2013-06-09 Jim ProcterMerge branch 'develop' into develop_m2_8_1_2 tree | commitdiff
2013-06-09 Jim ProcterJAL-674 avoid runtime dependency on annotate3d webservi... tree | commitdiff
2013-05-21 Jim ProcterJAL-1140 JAL-674 process with annotate3d and Jmol to... tree | commitdiff
2013-02-13 jprocterfix merge conflicts for finess on JAL-1140 (introduced... tree | commitdiff
2013-02-13 jprocterJAL-1214 todo tree | commitdiff
2013-02-13 jprocterJAL-674 commented out annotate3d calling code for Jmol... tree | commitdiff
2013-02-13 jprocterJAL-1028 JAL-674 hooks to call external processing... tree | commitdiff
2012-12-07 jprocterproxy commit for Anne Menard <menard.annec@gmail.com... tree | commitdiff
2012-12-04 jprocterJAL-1140 - IO classes should only raise generic IOExcep... tree | commitdiff
2012-12-04 jprocterJAL-1214 todo tree | commitdiff
2012-12-04 jprocterJAL-674 commented out annotate3d calling code for Jmol... tree | commitdiff
2012-12-04 jprocterJAL-1028 JAL-674 hooks to call external processing... tree | commitdiff
2012-12-04 jprocterJAL-1028 tidy and refactor external processing and... tree | commitdiff
2012-11-19 jprocterbugfix tree | commitdiff
2012-11-17 jprocterreturn annotated rna sequences from rnaml returned... tree | commitdiff
2012-11-17 jprocterstore chainid on pdbentry tree | commitdiff
2012-11-15 jprocterMerge branch 'develop' into menard tree | commitdiff
2012-11-08 jprocterremember to close input file! tree | commitdiff
2012-11-08 jproctertidy imports tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2012-10-03 jprocterformatting tree | commitdiff
2012-08-14 Anne Menardlast version stay many bugs .. tree | commitdiff
2012-07-16 Anne MenardLast version tree | commitdiff
2012-07-10 Anne Menardv2 tree | commitdiff
2012-07-05 Anne MenardAdd support RNAML format tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2011-07-21 jprocterretrieve all sequences matching a particular name ... tree | commitdiff
2011-07-07 jprocterextract sequence from DNA bases like 'DG' (JAL-866) tree | commitdiff
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager... tree | commitdiff
2011-02-18 jproctercall to release any explicit event handler references tree | commitdiff
2011-01-18 jprocterjavadoc tree | commitdiff
2011-01-18 jprocterjavadoc tree | commitdiff
2011-01-06 jprocterJAL-730 tree | commitdiff
2011-01-05 jprocterJAL-727 tree | commitdiff
2010-11-11 jprocterimproved logic for distinguishing amino acids and nucle... tree | commitdiff
2010-09-23 jprocterapply jalview code style tree | commitdiff
2010-09-23 jprocterJalview 2.6 source licence tree | commitdiff
2010-08-18 jprocterJAL-612 - catch hidden OOM related to filling in cut... tree | commitdiff
2010-08-18 jproctercutn'paste fix so rna residue chains are assembled... tree | commitdiff
2010-06-29 jprocterupgrading structure/sequence binding so that a structur... tree | commitdiff
2010-06-29 jproctertypo bugfix tree | commitdiff
2010-06-11 jprocterpatch for JAL-556 - more robust mapping of sequence... tree | commitdiff
2010-06-11 jprocterpatch for JAL-556 tree | commitdiff
2010-04-30 jprocterjalview 2.5 release banner tree | commitdiff
2009-10-30 jprocterna pdb: recognise NA residue names tree | commitdiff
2009-10-30 jprocterna pdb: detect P backbone tree | commitdiff
2009-10-12 jprocterensure id string doesn't get set to the empty string... tree | commitdiff
2009-06-08 jprocterapply gpl development license tree | commitdiff
2009-06-08 jprocterpatch for wierd format header lines and apply gpl devel... tree | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch tree | commitdiff
2008-01-29 jprocterFileParse object can be re-used to read different files... tree | commitdiff
2007-11-16 jprocterrefactored ebi soap client and AbstractSequenceFetcher... tree | commitdiff
2007-10-27 jprocterenabled platform dependent embedding of menuBar with... tree | commitdiff
2007-07-13 jprocterrefactor tree | commitdiff
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