| 2014-01-29 |
Jim Procter | JAL-1432 updated copyright notices |
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| 2012-11-08 |
jprocter | tidy imports |
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| 2012-11-07 |
jprocter | JAL-957 manual update to applet authorlist - need to... |
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| 2012-10-22 |
jprocter | Jalview 2.8 Source Header |
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| 2012-10-03 |
jprocter | formatting |
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| 2012-09-25 |
jprocter | JAL-1031 allow empty selections to pass through to... |
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| 2012-09-24 |
jprocter | JAL-958 normalise logo menu options in applet |
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| 2012-06-13 |
jprocter | javatidy |
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| 2012-06-12 |
jprocter | JAL-1115 refactor reordering code operating directly... |
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| 2012-06-12 |
jprocter | JAL-1115 refactor base collection for Alignment from... |
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| 2012-05-30 |
jprocter | JAL-969 - refactor colourscheme machinery from GUI... |
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| 2012-05-30 |
jprocter | JAL-1114 - refactor methods handling Vectors and Hashta... |
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| 2012-05-24 |
jprocter | patch for occasional NPE when applet is quit |
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| 2012-05-23 |
jprocter | JAL-1078 - extend applet cut'n'paste features/annotatio... |
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| 2012-05-23 |
jprocter | JAL-1067, JAL-1105 - refactor parser to fit Jalview... |
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| 2012-05-23 |
jprocter | todo JAL-1104 : functions to refactor |
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| 2012-05-22 |
jprocter | Merge remote-tracking branch 'origin/Tcoffee_JAL-1065... |
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| 2011-10-28 |
jprocter | (JAL-885) RNA helix and purine pyrimidine colouring... |
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| 2011-10-27 |
jprocter | (JAL-969) refactored alignmentViewport base class to... |
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| 2011-10-21 |
jprocter | Refactored alignment viewport to use common base, exten... |
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| 2011-10-21 |
jprocter | Merge branch 'Release_2_7_Branch_hotfix_JAL-962' into... |
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| 2011-10-21 |
jprocter | (JAL-965) new api methods to allow features to be loade... |
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| 2011-10-10 |
jprocter | update author list in license for (JAL-826) |
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| 2011-09-27 |
jprocter | apply version 2.7 copyright |
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| 2011-09-16 |
jprocter | JAL-468 JAL-936 sort alignment by tree and autosort... |
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| 2011-08-30 |
jprocter | patch for JAL-729 - NPE avoided and cut and paste impor... |
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| 2011-08-15 |
jprocter | JAL-904 added scrollToRow and scrollToColumn methods... |
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| 2011-07-28 |
jprocter | added 'since 2.x notes to parameters'. User configurabl... |
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| 2011-07-05 |
jprocter | Revert "Revert "needed for linkedapplets_ng.html (JAL... |
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| 2011-07-05 |
jprocter | Revert "needed for linkedapplets_ng.html (JAL-859,JAL... |
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| 2011-07-05 |
jprocter | needed for linkedapplets_ng.html (JAL-859,JAL-469) |
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| 2011-07-05 |
jprocter | whole frame should be validated. |
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| 2011-06-30 |
jprocter | set initial annotation panel height appropriately ... |
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| 2011-05-17 |
jprocter | refactor to allow distinct StructureSelectionManager... |
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| 2011-05-05 |
jprocter | javadoc and informative error message when external... |
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| 2011-02-14 |
jprocter | JAL-769 |
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| 2011-02-14 |
jprocter | JAL-621 and JAL-564 |
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| 2011-02-04 |
jprocter | group associated annotation and logos JAL-516 JAL-759 |
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| 2011-01-21 |
jprocter | relaxed ID matching parameter JAL-753 and sortBy JAL-754 |
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| 2011-01-17 |
jprocter | JAL-750 and JAL-451 |
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| 2011-01-12 |
jprocter | javascript callback for selection, mousover, and functi... |
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| 2010-12-14 |
jprocter | refactored and patched for JAL-721 |
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| 2010-09-23 |
jprocter | revised author list |
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| 2010-09-23 |
jprocter | apply jalview code style |
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| 2010-09-23 |
jprocter | Jalview 2.6 source licence |
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| 2010-08-31 |
jprocter | notes re JAL-623 and JAL-583, new api methods for addin... |
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| 2010-08-25 |
jprocter | excluded methods related to broken Jmol applet binding... |
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| 2010-08-20 |
jprocter | refactored external structure viewer binding API calls... |
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| 2010-07-21 |
jprocter | URLs that begin with javascript: are opened in the... |
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| 2010-06-29 |
jprocter | new ajax api methods for linking existing jmol viewers... |
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| 2010-06-11 |
jprocter | patched for JAL-531 - only display full symbol distribu... |
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| 2010-06-06 |
jprocter | patch for JAL-542 |
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| 2010-04-30 |
jprocter | sort by length |
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| 2010-04-30 |
jprocter | jalview 2.5 release banner |
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| 2010-04-29 |
jprocter | isAligned assertion (bug 0008144) |
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| 2010-04-29 |
jprocter | hide/show selected region menu entries and key bindings |
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| 2010-04-28 |
jprocter | make groups from selection |
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| 2010-04-26 |
jprocter | build date output in the About box, and build details... |
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| 2010-04-23 |
jprocter | refresh table method |
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| 2010-04-16 |
jprocter | export graduated feature colors |
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| 2009-06-08 |
jprocter | apply gpl development license |
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| 2009-03-17 |
jprocter | sortbytree parameter added and undo re-instated for... |
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| 2009-02-06 |
jprocter | showUnconserved and updated reference |
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| 2008-11-12 |
jprocter | automatic scrolling option added to view |
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| 2008-09-04 |
jprocter | merge from 2_4_Release branch |
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| 2008-06-26 |
jprocter | added URLEncoder.encode to properly escape CGI encoded... |
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| 2008-04-21 |
jprocter | centrecolumnlabels format menu item and parameter added... |
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| 2007-11-16 |
jprocter | todo for sortbyPID operating on current selection rathe... |
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| 2007-10-27 |
jprocter | must do any modification to menus before they are embed... |
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| 2007-10-27 |
jprocter | refactored embedded menu machinery |
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| 2007-10-26 |
jprocter | add mac dependent use of embedded menu bar rather than... |
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| 2007-10-10 |
jprocter | featureGroup show/hide and newView methods for applet... |
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| 2007-08-01 |
jprocter | added tree as an applet to application servlet parameter |
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| 2007-05-02 |
jprocter | refactored do and undo() method to take array of alignm... |
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| 2007-04-27 |
amwaterhouse | Alignment properties available |
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| 2007-04-26 |
amwaterhouse | Alignment Properties required for annotation file |
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| 2007-04-25 |
amwaterhouse | Export annotations with properties |
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| 2007-04-12 |
amwaterhouse | Number pad keys can be used in cursor mode |
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| 2007-03-23 |
amwaterhouse | slide is transparent to hidden columns |
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| 2007-02-27 |
amwaterhouse | Use paintAlignment |
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| 2007-02-07 |
amwaterhouse | Formatting |
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| 2007-02-01 |
amwaterhouse | removed deprecated bits |
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| 2007-01-31 |
amwaterhouse | Dont export annotations if not visible |
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| 2007-01-30 |
amwaterhouse | Output groups in annotation file |
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| 2007-01-29 |
amwaterhouse | New view copies annotations across |
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| 2007-01-25 |
amwaterhouse | Annotations move when full alignment edited |
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| 2007-01-25 |
amwaterhouse | Output annotations |
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| 2007-01-24 |
amwaterhouse | output now takes alignment, not just sequences |
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| 2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport |
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| 2007-01-19 |
amwaterhouse | export features/annotations not for import |
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| 2007-01-19 |
amwaterhouse | Applet can output and load annotations, features |
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| 2007-01-17 |
amwaterhouse | Dont set the font of alignFrameMenubarcvs update applet... |
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| 2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed |
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| 2006-12-21 |
amwaterhouse | getSequenceAsString |
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| 2006-12-06 |
jprocter | typo fix. |
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| 2006-11-27 |
amwaterhouse | Allow new window from output sequences |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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