JAL-3949 Complete new abstracted logging framework in jalview.log. Updated log calls...
[jalview.git] / src / jalview / io / FormatAdapter.java
2022-02-11 Ben SoaresJAL-3949 Complete new abstracted logging framework...
2021-09-21 Ben SoaresJAL-3691 automatic insertion of Locale.ROOT to toUpperC...
2018-07-20 gmungocJAL-3048 revised AlignExportSettings dialog with respon...
2018-06-27 hansonrJAL-3032 part2 local file reading by JFileChooser
2018-02-06 kiramtMerge branch 'develop' into feature/JAL-2759 feature/JAL-2759
2018-01-16 kiramtJAL-2759 Moved alignment annotation code out of HiddenC...
2018-01-10 gmungocJAL-1793 update spike branch to latest
2017-11-30 Jim ProcterJAL-2849 fix
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection...
2017-01-11 gmungocJAL-2344 separated AlignmentFileI into AlignmentFileRea...
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI...
2016-11-24 gmungocFurther tweaks to get tests passing
2016-11-24 gmungocFileFormatI further tweaks, clean compile
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-08-22 gmungocJAL-2175 code tidying
2016-07-18 gmungocfileFormat enum wip changes
2016-07-12 gmungocFileFormat enum wip changes
2016-07-11 gmungocfile format enum wip changes
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-16 tcofoegbuJAL-1486 off-by-one error bugfix
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-08-10 tcofoegbuJAL-1486 fixed flatfile output of visible region for...
2015-06-26 tcofoegbuJAL-1641 fixed broken functionalities after refactor
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export...
2015-06-09 tcofoegbuJAL-1488 bug-fix for incorrect start/end position in...
2015-05-19 tcofoegbuJAL-1641 Further refactoring of JSON export option...
2015-05-12 tcofoegbuJAL_793 implemented embeding source data in exported...
2015-05-11 tcofoegbuJAL-1641 cherry-picked changes into develop compatible...
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-11-18 Jim ProcterMerge branch 'JAL-1587_promotedisorder' into develop
2014-11-18 Jim ProcterJAL-674 make temperature factor, local secondary struct...
2014-11-12 Charles OfoegbuExcluded HtmlFile.java dependencies from AppletFomatAdapter
2014-09-12 j.procter@dundee... JAL-1486 JAL-1543 pushed alignment viewport->view-...
2014-06-06 Jim ProcterJAL-1517 source formatting
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-04-23 Jim ProcterJAL-1486 todo for 2.8.2 release
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2012-10-22 jprocterJalview 2.8 Source Header
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-01-05 jprocterJAL-727
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-06-03 jprocterpatch ensuring annotation is output correctly re *...
2010-04-30 jprocterjalview 2.5 release banner
2010-03-11 jprocterpass any warning messages to StdErr - also todo to...
2009-06-08 jprocterapply gpl development license
2008-11-04 jprocterapplication specific validIOformat method
2008-09-04 jproctermerge from 2_4_Release branch
2008-01-21 jprocterjavadoc
2007-10-04 jprocterselected region output also supports generation of...
2007-10-02 jprocteradded colSel as a parameter formatAdaptor print functio...
2007-07-25 jprocterIO rearrangement for AMSAFile output
2007-02-07 amwaterhouseFormatting
2007-01-18 amwaterhouseFile Parsing returns Alignments, not Sequence[]
2006-08-21 amwaterhouseheader updated
2006-07-19 amwaterhouseMake new seq[] when modifying hidden bits
2006-07-18 amwaterhouseomitHiddenColumns
2005-12-06 amwaterhouseafter merge
2005-09-22 amwaterhouseCreate instance of FormatAdapter
2005-08-23 amwaterhouseFinalize formats
2005-06-30 amwaterhouseFormatting changes
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-05-27 jprocterResponse to bug mantis?id=8187 - some quick hacks to...
2005-05-26 jprocterfairly pointless catch exception error information...
2005-05-03 amwaterhouseformatAdapter.formats, remove redundant code
2004-11-02 amwaterhouseJalview Imported Sources start