source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	2981	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	177242	AlignFrame.java	blob \| history \| raw
-rw-r--r--	31348	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48021	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18555	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13964	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26111	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8638	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	32798	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24772	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	10042	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	30403	AppJmol.java	blob \| history \| raw
-rw-r--r--	5019	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19354	AppVarna.java	blob \| history \| raw
-rw-r--r--	13955	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2706	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23277	BlogReader.java	blob \| history \| raw
-rw-r--r--	33284	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16940	Console.java	blob \| history \| raw
-rw-r--r--	5969	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	9462	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22970	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	87228	Desktop.java	blob \| history \| raw
-rw-r--r--	4198	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2796	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15558	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12815	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50634	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10083	Finder.java	blob \| history \| raw
-rwxr-xr-x	9374	FontChooser.java	blob \| history \| raw
-rw-r--r--	4159	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2767	Help.java	blob \| history \| raw
-rw-r--r--	1724	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1206	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11758	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12873	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3942	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	15060	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	168015	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15462	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1928	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2980	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3496	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4225	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8366	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2879	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2602	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24139	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1011	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11307	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19851	PCAPanel.java	blob \| history \| raw
-rw-r--r--	9363	PDBSearchPanel.java	blob \| history \| raw
-rwxr-xr-x	6326	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3976	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	74708	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	32301	Preferences.java	blob \| history \| raw
-rw-r--r--	6953	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6307	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7942	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7586	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15647	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17204	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4153	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12697	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23175	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	49197	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	26685	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13923	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8435	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9296	SplashScreen.java	blob \| history \| raw
-rw-r--r--	18797	SplitFrame.java	blob \| history \| raw
-rw-r--r--	29536	StructureChooser.java	blob \| history \| raw
-rw-r--r--	6231	StructureViewer.java	blob \| history \| raw
-rw-r--r--	13254	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5982	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	24938	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23364	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26962	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5313	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35313	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8277	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	21997	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43154	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9957	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17559	WsPreferences.java	blob \| history \| raw