formatting
[jalview.git] / src / jalview / bin / Jalview.java
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-09-16 jprocterfix for JAL-895 - new exampleFile_2_7.jar and logic...
2011-08-17 jprocterJAL-898 - ensure we only remove a clargs progress bar...
2011-08-05 jprocterfetch groovy script from URL (JAL-899) and show progres...
2011-07-28 jprocterrefer to local default setting for proxy when connecting to
2011-04-08 jprocterallow groovy scripts to be run when in headless mode...
2011-04-07 jprocterallow groovy scripts to be run when in headless mode...
2011-04-07 jprocterallow groovy scripts to be run when in headless mode...
2011-01-07 jprocterrefactored dropFile allowing known information to be...
2010-11-14 jprocterrefactored to decouple dependencies due to FileParse...
2010-11-14 jprocterrefactored protocol check to jalview.io.FileParse
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-08-31 jprocternotes re JAL-629
2010-08-06 jprocterinteractive/batch mode test for groovy scripting (See...
2010-06-12 jprocterdocumented the -colour command line argument.
2010-06-09 jprocterOSX look and feel JAL-577
2010-05-14 jprocterstandard function for bootstrapping discovery threads
2010-04-30 jprocterjalview 2.5 release banner
2010-02-10 jprocterdas feature fetch followed by png output fixed (bug...
2009-11-09 jproctermore spin on GA prompt
2009-11-09 jprocteruser friendly GA and privacy statement
2009-10-13 jprocterprompt user to enable usage stats
2009-07-24 jprocterexplicitly grab all permissions for application executi...
2009-06-12 jprocterretrieve and init vamsas session from vdoc at URL
2009-06-08 jprocterclargs documentation, new vamsas session import and...
2009-06-01 jprocterfirst experiment with GA application use tracking
2009-03-17 jproctersortbytree/nosortbytree and defprop arguments. (defprop...
2008-12-04 jprocteradded local das sequence source CLI and documentation
2008-12-04 jprocterallow sequence source to be specified as sequence:mydas...
2008-09-04 jproctermerge from 2_4_Release branch
2008-06-30 jproctersafer retrieval of groovy scripts from URLs
2008-01-29 jproctergroovy scripts can be read from stdin
2008-01-11 jprocteradded groovy argument for launching a groovy script...
2007-11-12 jprocterjavadoc and introduction of dasserver and fetchdas...
2007-08-01 jprocteradded the '-tree' parameter to open a tree from the...
2007-07-30 jproctertest cc change revoked.
2007-07-30 jproctertest cc
2007-05-04 amwaterhouseNew example file for version 2.3
2007-05-04 amwaterhouseNew example file for version 2.3
2007-02-07 amwaterhouseFormatting
2007-02-06 jprocterhardwired default user questionnaire url and by default...
2007-02-05 jproctercommand line hook for questionnaire url argument.
2007-02-02 amwaterhouseLookandFeel must be set in headless state as window...
2006-11-06 amwaterhouseRemember fileName in alignFrame
2006-09-11 amwaterhouseError message if file not found moved for headless...
2006-08-21 amwaterhouseheader updated
2006-08-10 amwaterhousefile: is a URL
2006-07-07 amwaterhouseColour argument added, to mirror applet view
2006-06-09 amwaterhouseparseFeaturesFile
2006-05-11 amwaterhouseRecently loaded files, urls, append sequences to Alignment
2006-04-04 amwaterhouseAdd annoations from the command line
2006-04-04 amwaterhouseJalview2XML does not use static load
2006-03-08 amwaterhouseIdentifyFile should not be static
2006-01-12 jprocterensured properties are loaded before loggers are initia...
2005-12-06 amwaterhouseafter merge
2005-10-07 amwaterhouseDon't exit if file not found and not headless
2005-09-30 amwaterhouseRemove redundancy in Eclipse
2005-09-15 amwaterhouseLogger moved to prefs so that class not found error...
2005-08-17 jprocter<No Comment Entered>
2005-08-17 amwaterhouseUse getDefault for exampleFile
2005-08-15 amwaterhouseOutput java version, os version on startup
2005-08-09 amwaterhouseProperties file is used in preference to viewport/cache...
2005-08-03 amwaterhouseCan run headless=true
2005-07-07 amwaterhouseRuns if no files to open and -nodisplay is not used
2005-06-30 amwaterhouseFormatting changes
2005-06-10 jprocteradded castor logger configuration.
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-06-02 amwaterhouseCheck startup file is not null
2005-05-25 jproctertidied up system.out messages and moved many to stderr.
2005-05-20 amwaterhouselook for startup file
2005-04-29 amwaterhouseread in preferences at start up
2005-04-25 amwaterhouseif applet, load properties in void init
2005-04-21 amwaterhouseAllow for -open arg
2005-04-07 amwaterhouseremove setdecorated line
2005-03-31 jprocteradded a an axis log4j appender property to the jalview...
2005-03-30 jprocterfixed the log4j messages.
2005-03-21 amwaterhouseuse system l&f
2005-03-15 amwaterhousestick with cross platform look and feel!!!
2005-03-15 amwaterhousetry system look and feel for a change
2005-02-07 amwaterhouseload properties on startup
2005-01-25 amwaterhousesystem.exit or destroy if applet or app
2005-01-25 amwaterhouseextends Applet
2004-12-10 amwaterhouseUse cross platform lookandfeel
2004-11-16 amwaterhousedon't use setdefaultlookandfeeldecorated, its buggy
2004-11-02 amwaterhouseJalview Imported Sources start