2019-05-19 |
hansonr | Jalview-JS/JAL-3253-applet adds AlignFrameI empty inter... |
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2019-05-18 |
hansonr | Jalview-JS/JAL-3253-applet adds shell JalviewJSApi... |
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2019-05-17 |
hansonr | Jalview-JS/JAL-3253-applet more argument parsing |
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2019-05-17 |
hansonr | Jalview-JS/JAL-3253-applet additional static final... |
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2019-05-17 |
hansonr | Jalview-JS/JAL-3253-applet additional static final... |
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2019-05-17 |
hansonr | Jalview-JS/JAL-3253-applet adding more applet parameter... |
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2019-05-16 |
hansonr | Jalview-JS/JAL-3253 applet param PDBFILE |
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2019-05-16 |
hansonr | Jalview-JS/JAL-3253 applet params jpredfile, jnetfile |
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2019-05-15 |
gmungoc | JAL-3253-applet feature parameter processing fixed |
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2019-05-15 |
gmungoc | JAL-3253 ApplicationSingletonProvider replaces Instance |
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2019-05-13 |
hansonr | JalviewAppLoader for moving code from JalviewLite relat... |
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2019-05-10 |
hansonr | JAL-3253 jalview.bin.Instance streamlining |
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2019-05-10 |
hansonr | JAL-3253 jalview.bin.Instance handles all singleton... |
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2019-05-09 |
hansonr | JAL-3253 preliminary static fixes for JavaScript part... |
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2019-05-09 |
hansonr | JAL-3253 preliminary static fixes for JavaScript part... |
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2019-05-08 |
hansonr | JAL-3253 preliminary static fixes for JavaScript part 2 |
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2019-05-08 |
hansonr | JAL-3253 preliminary static fixes for JavaScript |
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2019-04-05 |
hansonr | fixes for Jalview command-line URI code |
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2019-04-03 |
hansonr | replacing @j2sNative with @j2sIgnore where appropriate... |
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2019-04-03 |
hansonr | j2sNative clean-up. Fixes problem with second try of... |
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2019-03-27 |
gmungoc | JAL-3032 small formatting and isJS() tidy |
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2019-03-27 |
hansonr | isJS cleanup |
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2019-03-13 |
gmungoc | Merge branch 'develop' into trialMerge |
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2019-03-11 |
gmungoc | Merge branch 'feature/JAL-3127_seqidChainshading' into... |
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2019-03-06 |
gmungoc | JAL-3035 more das bits removed |
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2019-03-06 |
Jim Procter | JAL-3208 re-enable the setprop CLI arg, but only in... |
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2019-02-28 |
gmungoc | JAL-3032 any url parameter not "j2s..." taken as Jalvie... Jalview-BH/JAL-3026-JAL-3063-JAXB |
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2019-02-25 |
gmungoc | JAL-3032 Jalview (as JS) parse query params to main... |
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2019-01-26 |
hansonr | Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -... |
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2019-01-21 |
hansonr | isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... |
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2019-01-18 |
hansonr | canvas line/font/pixel fixes; menu accelerators; |
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2019-01-11 |
hansonr | (commented out but potentially useful) methods to tap... |
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2018-10-17 |
Jim Procter | Merge branch 'feature/JAL-3063JAXB' into Jalview-BH... |
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2018-10-09 |
Jim Procter | JAL-3127 pass reference to AlignViewportI when creating... |
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2018-09-18 |
Jim Procter | JAL-3035 more dedasification |
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2018-09-11 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_Branch |
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2018-09-05 |
Jim Procter | JAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings |
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2018-07-23 |
gmungoc | JAL-3056 suppress menu options, and repoint Help, for... |
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2018-07-17 |
bsoares | JAL-3065 |
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2018-07-11 |
Jim Procter | JAL-3048 refactored export settings to bean+dialog... Jalview-BH/JAL-3048_exportSettingsrefactor |
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2018-06-27 |
hansonr | JAL-3032 just the changes pulled already |
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2018-06-26 |
Jim Procter | Merge branch 'tasks/JAL-3035_remove_dasobert_dependency... |
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2018-06-26 |
Jim Procter | JAL-3035 - jalview-das is no more ! |
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2018-06-23 |
hansonr | JAL-3026 JDesktop/JInternalFrames support + relative... |
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2018-06-20 |
hansonr | update of javajs package; adds org.apache.harmony,... |
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2018-05-09 |
Jim Procter | JAL-2976 fixed bad equivalence check and implemented... |
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2018-05-02 |
Jim Procter | JAL-2976 fallback to Vaqua for Macs that don’t work... |
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2017-10-03 |
gmungoc | JAL-2738 copy to spikes/mungo |
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2017-08-16 |
Jim Procter | JAL-2418 source formatting |
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2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
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2017-02-27 |
gmungoc | JAL-1632 similarity options on TreeChooser panel affect... |
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2016-12-16 |
gmungoc | JAL-2360 added UserColourScheme.toAppletParameter+test... |
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2016-12-16 |
gmungoc | JAL-2360 getColour() renamed to getColourScheme(),... |
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2016-11-25 |
gmungoc | Merge branch 'develop' into trialMerge |
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2016-11-14 |
tcofoegbu | JAL-2322 Refactored unified architecture for data ... |
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2016-11-11 |
tcofoegbu | JAL-2277 Refactored out duplicated method - printUnwrap... |
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2016-10-26 |
tcofoegbu | JAL-2284 basic support for exporting BioJS MSA viewer... features/JAL-2284_export-biojsmsa-via-cli |
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2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
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2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
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2016-10-05 |
gmungoc | JAL-1191 revert to using SequenceOntologyLite due to... |
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2016-10-05 |
gmungoc | JAL-1191 configure full SO for desktop, SOLite for... |
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2016-08-30 |
gmungoc | Merge branch 'develop' into features/filetypeEnum |
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2016-08-08 |
gmungoc | JAL-2168 document '-nonews' parameter |
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2016-08-05 |
gmungoc | JAL-2168 skip news feed if parameter "-nonews" is supplied |
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2016-07-11 |
gmungoc | file format enum wip changes |
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2016-06-20 |
Jim Procter | Merge branch 'develop' into features/JAL-1812_JAL-2083_... features/JAL-1812_JAL-2083_groovyBinding |
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2016-05-04 |
gmungoc | Merge branch 'groovy/JAL-2074_upgradeto2.4.4' into... |
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2016-05-02 |
gmungoc | JAL-1812 bind Groovy to Jalview rather than Desktop... |
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2016-04-28 |
gmungoc | JAL-2083 removed use of reflection for Groovy |
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2016-04-26 |
gmungoc | JAL-1981 catch any exception when setting QuaQua look... |
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2016-04-25 |
Jim Procter | JAL-2074 disable security manager at start up re: lopic... |
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2015-11-21 |
gmungoc | JAL-653 JAL-1968 FeaturesFile now handles Jalview or... |
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2015-10-16 |
Jim Procter | JAL-1925 update source version in license Release_2_9_0b2 |
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2015-10-08 |
Jim Procter | JAL-1894 update year/version in copyright |
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2015-10-08 |
Jim Procter | Merge branch 'develop' into Release_2_9_0b1_Branch |
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2015-10-05 |
gmungoc | JAL-1812 set/return currentAlFrame for Groovy in headle... |
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2015-09-10 |
Jim Procter | JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... |
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2015-09-10 |
Jim Procter | JAL-1645 source formatting and organise imports |
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2015-07-13 |
tcofoegbu | JAL-1788 added help documentation for biojson |
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2015-07-09 |
tcofoegbu | JAL-1769 added test for commandline input operations |
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2015-07-08 |
gmungoc | JAL-1759 merge from develop |
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2015-07-06 |
tcofoegbu | JAL-1769 fixed headless execution mode and created... |
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2015-07-02 |
tcofoegbu | JAL-1443 data validation for empty content before loadi... |
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2015-06-05 |
tcofoegbu | JAL-1760 JAL-1641 Serialisation of Hidden Seqs and... |
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2015-05-21 |
tcofoegbu | JAL-1740 implemented auto-update of BioJsMSA, introduce... features/JAL-1740_BioJsAutoUpdater |
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2015-03-26 |
gmungoc | JAL-1688 compiler warnings removed |
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2015-03-06 |
Jim Procter | JAL-1683 replace year/version strings with tokens in... |
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2015-03-06 |
Jim Procter | Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... |
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2015-02-05 |
Charles Ofoegbu | merge commit |
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2015-02-04 |
Charles Ofoegbu | JAL-1643 Modified JalviewFileChooser to have a more... |
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2014-12-22 |
Jim Procter | Merge: 497958b 68dcaa7 |
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2014-12-15 |
Jim Procter | JAL-1620 version bump and release notes |
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2014-12-08 |
Charles Ofoegbu | Added annotation export configuration for Html export... |
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2014-12-05 |
Charles Ofoegbu | Merge branch 'features/JAL-1605_html-svg-export' into... |
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2014-12-05 |
Charles Ofoegbu | JAL-1605 added command line support for html export... |
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2014-12-05 |
gmungoc | JAL-1614 flag 'protein' removed |
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2014-12-05 |
gmungoc | JAL-1614 flag 'protein' removed |
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2014-11-28 |
Jim Procter | JAL-1611 revise log level to reduce verbosity |
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2014-11-19 |
gmungoc | JAL-1342 new command-line parameter -jabaws <URL> |
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2014-11-17 |
Charles Ofoegbu | comand line support for svg generation |
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