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Merge branch 'develop' into features/JAL-1793VCF
[jalview.git] / src / jalview / gui / PCAPanel.java
2017-09-14 gmungocJAL-2727 method to check if PCAPanel thread is working blob | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting blob | commitdiff | diff to current
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges blob | commitdiff | diff to current
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into... blob | commitdiff | diff to current
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside... blob | commitdiff | diff to current
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... blob | commitdiff | diff to current
2017-04-12 gmungocJAL-1632 remove unused check for sequences aligned blob | commitdiff | diff to current
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom... blob | commitdiff | diff to current
2017-04-07 gmungocJAL-2393 code tidying for review comments blob | commitdiff | diff to current
2017-03-27 gmungocJAL-2416 add score model description field for tooltip... blob | commitdiff | diff to current
2017-02-27 gmungocJAL-1632 dialog to calculate either Tree or PCA blob | commitdiff | diff to current
2017-02-27 gmungocJAL-1632 add score model params to PCAModel and PCA... blob | commitdiff | diff to current
2017-02-23 gmungocJAL-2403 JAL-1483 changes to ScoreModelI hierarchy... blob | commitdiff | diff to current
2017-02-20 gmungocJAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix... blob | commitdiff | diff to current
2017-02-13 gmungocJAL-1632 JAL-2416 load score matrices from file, as... blob | commitdiff | diff to current
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2360colourSche... blob | commitdiff | diff to current
2017-01-12 gmungocJAL-2379 null references to PCA model when panel is... blob | commitdiff | diff to current
2016-12-12 gmungocJAL-1544 backgroud -> background blob | commitdiff | diff to current
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane blob | commitdiff | diff to current
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch blob | commitdiff | diff to current
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... blob | commitdiff | diff to current
2016-08-24 gmungocJAL-1424 corrected Message bundle lookup key blob | commitdiff | diff to current
2016-06-19 Jim ProcterJAL-2110 JAL-2131 JAL-1765 remove reference to jalview... blob | commitdiff | diff to current
2016-02-09 tcofoegbuJAL-1975 updated image export pipeline to produce more... blob | commitdiff | diff to current
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 blob | commitdiff | diff to current
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports blob | commitdiff | diff to current
2015-05-29 gmungocJAL-1753 declare field with interface type; check for... blob | commitdiff | diff to current
2015-05-29 gmungocJAL-1753 duplicated code refactored to new class Progre... blob | commitdiff | diff to current
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch blob | commitdiff | diff to current
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... blob | commitdiff | diff to current
2014-12-15 Jim ProcterJAL-1620 version bump and release notes blob | commitdiff | diff to current
2014-11-12 Charles OfoegbuAdded support for SVG Export blob | commitdiff | diff to current
2014-09-23 darolmarJAL-1355 blob | commitdiff | diff to current
2014-09-19 darolmarJAL-1355 blob | commitdiff | diff to current
2014-06-06 Jim ProcterJAL-1517 source formatting blob | commitdiff | diff to current
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 blob | commitdiff | diff to current
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 blob | commitdiff | diff to current
2014-06-03 Jim ProcterJAL-1473 exclude score models not compatible with PCA... blob | commitdiff | diff to current
2014-05-22 Jim ProcterJAL-1503 update version in GPL header blob | commitdiff | diff to current
2014-04-21 Jim ProcterJAL-1473 define defaults for DNA/Protein PCA calculation blob | commitdiff | diff to current
2014-04-21 Jim ProcterJAL-1485 JAL-1483 show i18n key for different available... blob | commitdiff | diff to current
2014-04-21 Jim ProcterJAL-1473 show available score matrices for use in PCA... blob | commitdiff | diff to current
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1... blob | commitdiff | diff to current
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge blob | commitdiff | diff to current
2014-01-29 Jim ProcterJAL-1432 updated copyright notices blob | commitdiff | diff to current
2013-12-25 darolmarJAL-1355 (basic i18n support) blob | commitdiff | diff to current
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs... blob | commitdiff | diff to current
2012-11-08 jproctertidy imports blob | commitdiff | diff to current
2012-10-22 jprocterJalview 2.8 Source Header blob | commitdiff | diff to current
2012-10-03 jprocterformatting blob | commitdiff | diff to current
2012-09-25 jprocterJAL-1031 JAL-1032 if selection is non-null but empty... blob | commitdiff | diff to current
2012-06-15 jprocterformatting blob | commitdiff | diff to current
2012-06-15 jprocterJAL-1125 option to switch between Jalview and SeqSpace... blob | commitdiff | diff to current
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel. blob | commitdiff | diff to current
2012-06-15 jprocterJAL-1120 patch for desktop blob | commitdiff | diff to current
2012-06-15 jprocterpatch for JAL-1121 - reset button and slightly wider... blob | commitdiff | diff to current
2012-06-15 jprocterMerge branch 'JAL-1013_pca_rna_dna' into develop blob | commitdiff | diff to current
2011-12-14 jprocterJAL-1033, JAL-1013 - ensure pca window shown only after... blob | commitdiff | diff to current
2011-12-14 jprocterJAL-1013 - rename nucleotide and ensure current calcula... blob | commitdiff | diff to current
2011-12-13 jprocterJAL-1013 - toy menu to switch between nucleotide and... blob | commitdiff | diff to current
2011-12-08 jprocter(JAL-1013) specify sequence type to ensure PCA calculat... blob | commitdiff | diff to current
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to... blob | commitdiff | diff to current
2011-10-10 jprocterupdate author list in license for (JAL-826) blob | commitdiff | diff to current
2011-09-27 jprocterapply version 2.7 copyright blob | commitdiff | diff to current
2010-09-23 jprocterapply jalview code style blob | commitdiff | diff to current
2010-09-23 jprocterJalview 2.6 source licence blob | commitdiff | diff to current
2010-08-18 jprocterJAL-617 - new menu items for exporting current view... blob | commitdiff | diff to current
2010-04-30 jprocterjalview 2.5 release banner blob | commitdiff | diff to current
2009-06-08 jprocterapply gpl development license blob | commitdiff | diff to current
2008-09-04 jproctermerge from 2_4_Release branch blob | commitdiff | diff to current
2008-08-13 jproctercheck for null viewport on dataset recovery blob | commitdiff | diff to current
2008-08-13 jprocterensure input data can be recovered for tree and PCA... blob | commitdiff | diff to current
2007-02-07 amwaterhouseFormatting blob | commitdiff | diff to current
2006-11-27 amwaterhouseSome reason final radioButtons added to ButtonGroups... blob | commitdiff | diff to current
2006-11-23 amwaterhouseAssociate PCA with multiple views blob | commitdiff | diff to current
2006-11-07 amwaterhouseAdd keylistener to InternalFrame, not canvas blob | commitdiff | diff to current
2006-10-05 amwaterhouseMultiple Views blob | commitdiff | diff to current
2006-08-21 amwaterhouseheader updated blob | commitdiff | diff to current
2006-08-08 amwaterhouseCapitals blob | commitdiff | diff to current
2006-08-04 jprocterrecover original data for tree and pca as alignment... blob | commitdiff | diff to current
2006-07-21 amwaterhousegetViewAsString can ignore sequenceGroup blob | commitdiff | diff to current
2006-07-19 amwaterhouseOriginal tree data output in PFAM format blob | commitdiff | diff to current
2006-07-18 amwaterhouseUse selection area with hidden columns in calculations blob | commitdiff | diff to current
2006-07-12 amwaterhousesequences are private in SequenceGroup blob | commitdiff | diff to current
2005-12-06 amwaterhouseAfter merge blob | commitdiff | diff to current
2005-09-23 amwaterhouseNow an InternalFrame with menus blob | commitdiff | diff to current
2005-09-21 amwaterhouseSequences must be aligned before PCA blob | commitdiff | diff to current
2005-09-20 amwaterhouseUse selectionGroup to find chosen sequences blob | commitdiff | diff to current
2005-09-14 amwaterhouseSystem.gc after outofmemory blob | commitdiff | diff to current
2005-09-13 amwaterhouseWarn if out of memory blob | commitdiff | diff to current
2005-09-08 amwaterhouseInit PCA in thread blob | commitdiff | diff to current
2005-06-30 amwaterhouseFormatting changes blob | commitdiff | diff to current
2005-06-08 amwaterhouseFormatted source blob | commitdiff | diff to current
2005-06-08 amwaterhouseGPL license added blob | commitdiff | diff to current
2005-05-25 amwaterhouseselectiongroup could be null blob | commitdiff | diff to current
2005-03-15 amwaterhouseselection removed, now SelectionGroup does same job... blob | commitdiff | diff to current
2004-12-01 amwaterhouseBrackets moved blob | commitdiff | diff to current
2004-11-04 amwaterhouseOnly 4 or more sequences allowed for PCA blob | commitdiff | diff to current
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