JAL-3811 document SHOW_JWS2_SERVICES user preference and provide new menu option...
[jalview.git] / src / jalview / gui / SequenceRenderer.java
2019-05-06 gmungocJAL-3239 release note
2019-05-02 gmungocJAL-3239 draw EPS or SVG one character at a time (even... bug/JAL-3239monospacedEps
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings)
2017-11-13 kiramtJAL-2811 Add layer for cursor in SeqCanvas
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-09-05 kiramtJAL-2722 Reinstate allGroups value setting in getResidu...
2017-08-18 Jim ProcterMerge branch 'feature/2588' into merge/develop_feature...
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-07-12 kiramtJAL-2588 Check/fix show boxes settings + unit test...
2017-07-12 kiramtJAL-2588 Added tests
2017-07-11 kiramtJAL-2588 (and JAL-2610, JAL-2603) mid refactor
2017-06-28 kiramtJAL-2588 Gap colour scheme now shown in overview
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-06-08 kiramtJAL-2588 Consistent gap colour when in None colour...
2017-06-05 kiramtJAL-2588 Naive implementation of gaps as grey in overview
2017-05-12 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into...
2017-05-08 kiramtJAL-2512 Fix to show non-gap positions in None colour...
2017-03-24 kiramtJAL-2388 Removing AlignmentPanel dependency (mostly)
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen...
2017-01-31 gmungocJAL-2371 rename global/viewportColourScheme to residueS...
2017-01-27 gmungocJAL-2371 CollectionColourScheme renamed ResidueShader...
2017-01-04 gmungocJAL-2371 CollectionColourScheme wraps ColourSchemeI
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-07-19 Jim ProcterMerge branch 'develop' into efficiency/JAL-2034_JAL...
2016-06-20 Jim ProcterJAL-1551 tidy
2016-06-20 Jim ProcterJAL-2065 don’t pass stale group reference
2016-06-20 Jim ProcterJAL-2068 avoid ArrayIndexOutOfBounds when consensus...
2016-06-20 Jim ProcterJAL-2065 check position lies within group before gettin...
2016-03-25 Jim ProcterJAL-2034 notes on efficiency
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-09-10 Jim ProcterJAL-1370 detect any type of gap character in reference...
2015-06-01 Jim ProcterJAL-1370 group and alignment reference sequences are...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-01-09 Jim ProcterMerge branch 'JAL-1372_referenceseq' into feature_29...
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now...
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-05-02 Jim ProcterMerge branch 'Release_2_8_1_Branch' into JAL-1372_refer...
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-08-30 Jim ProcterJAL-1370 allow show unconserved to reflect differences...
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065...
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to...
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-07-05 jprocterRevert "partial patch for JAL-411 - text rendered above...
2011-07-05 jprocterpartial patch for JAL-411 - text rendered above features
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-08-18 jprocterrefactor to jalview.api methods
2010-06-06 jprocterpatch for JAL-542
2010-04-30 jprocterjalview 2.5 release banner
2009-06-12 jprocternullpointer bugfix (possibly not needed - was an error...
2009-06-08 jprocterapply gpl development license
2009-02-06 jproctershowUnconserved view and group setting
2008-09-04 jproctermerge from 2_4_Release branch
2007-02-07 amwaterhouseFormatting
2006-12-05 amwaterhouseSequence is char []
2006-11-13 amwaterhouseColour text
2006-08-21 amwaterhouseheader updated
2006-08-17 amwaterhouseMonospace check
2006-05-15 amwaterhouseMonospaced font not allowed if charWidth stretched
2006-05-15 amwaterhouseEPS font width is a double, check this for monospacedFont
2006-04-28 amwaterhousevalidCharWidth moved to viewport
2006-04-28 amwaterhousevalidCharWidth checks
2006-04-04 amwaterhouseCursor colour
2006-03-24 amwaterhouseCursor added
2006-02-24 amwaterhouseLess args, faster rendering
2006-01-30 amwaterhouseFaster paint
2005-12-06 amwaterhouseAfter merge
2005-10-03 amwaterhouseRemove float width
2005-09-30 amwaterhouseRemove redundancy in Eclipse
2005-09-20 amwaterhouseChecks end of sequence before drawing text
2005-06-30 amwaterhouseFormatting changes
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-05-24 amwaterhousesetgraphics black
2005-05-23 amwaterhousecolour groups by text colour
2005-05-23 amwaterhouseboxes, colour text, show text added to groups
2005-05-04 amwaterhouseno need to send vector pid or seqnum
2005-04-15 amwaterhouseno need to send consensus everytime
2005-04-06 amwaterhousedont draw first block if colour is null
2005-03-15 amwaterhouseselection removed, now SelectionGroup does same job...
2005-03-08 amwaterhouseonly set graphics black once at beginning of text
2005-01-13 amwaterhouseSend array of groups to renderer
2005-01-13 amwaterhouseGetResidueBoxColour altered for faster rendering
2004-12-17 amwaterhouseUse the isGap method in utils
2004-12-15 amwaterhouseColourScheme no longer requires sequence
2004-12-14 amwaterhouseDont try{}catch the findColour method, lets fix this now
2004-12-10 amwaterhouseLooks to viewportfor global settings
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